RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 FCRL3Q96P31 734 aaPredicted RBP10.72□□□□□ -0.69
SHKBP1-206ENST00000595523 RAB33BQ9H082 229 aa10.72□□□□□ -0.69
SHKBP1-206ENST00000595523 ZMYND15Q9H091 742 aa10.72□□□□□ -0.69
SHKBP1-206ENST00000595523 P2RY12Q9H244 342 aa10.72□□□□□ -0.69
SHKBP1-206ENST00000595523 KIR3DX1Q9H7L2 352 aa10.72□□□□□ -0.69
SHKBP1-206ENST00000595523 VPS37BQ9H9H4 285 aa10.72□□□□□ -0.69
SHKBP1-206ENST00000595523 XAB2Q9HCS7 855 aaKnown RBP10.72□□□□□ -0.69
SHKBP1-206ENST00000595523 SIDT1Q9NXL6 827 aaKnown RBP10.72□□□□□ -0.69
SHKBP1-206ENST00000595523 IL1RAPL1Q9NZN1 696 aa10.72□□□□□ -0.69
SHKBP1-206ENST00000595523 ZCWPW2A0A1B0GU75 182 aa10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 FAM237BA0A1B0GVD1 139 aa10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 IQCF5A8MTL0 148 aa10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 BHMG1C9JSJ3 638 aaPredicted RBP10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 GOLGA8KD6RF30 607 aa10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 GOLGA8TH3BQL2 631 aa10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 QSOX1O00391 747 aa10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 DNALI1O14645 258 aaPredicted RBP10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 FTH1P02794 183 aa10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 GSTM1P09488 218 aa10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 AMD1P17707 334 aa10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 ACADLP28330 430 aa10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 CCR7P32248 378 aa10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 CSTF2P33240 577 aaKnown RBP eCLIP10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 ABCG1P45844 678 aa10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 CD151P48509 253 aa10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 SARNPP82979 210 aaKnown RBP10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 GSTM4Q03013 218 aa10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 RPA4Q13156 261 aa10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 CLN3Q13286 438 aa10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 BRD3Q15059 726 aa10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 PPP1R7Q15435 360 aa10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 TYSND1Q2T9J0 566 aa10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 AARS2Q5JTZ9 985 aaKnown RBP10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 ARMC3Q5W041 872 aa10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 KIAA0930Q6ICG6 404 aaPredicted RBP10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 TMEM135Q86UB9 458 aa10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 JAMLQ86YT9 394 aa10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 KLHL7Q8IXQ5 586 aa10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 PPIL6Q8IXY8 311 aa10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 PHC3Q8NDX5 983 aa10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 KCNE4Q8WWG9 221 aa10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 ELMO1Q92556 727 aa10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 ART4Q93070 314 aa10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 SIGLEC10Q96LC7 697 aa10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 TGM7Q96PF1 710 aa10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 EPHA6Q9UF33 1036 aa10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 RALYQ9UKM9 306 aaKnown RBP10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 CDYLQ9Y232 598 aa10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 PCDHGA3Q9Y5H0 932 aa10.71□□□□□ -0.69
SHKBP1-206ENST00000595523 BOD1L1Q8NFC6 3051 aa10.71□□□□□ -0.7
SHKBP1-206ENST00000595523 HEATR5BQ9P2D3 2071 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 OR5K3A6NET4 321 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 SDR42E2A6NKP2 422 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 EFCAB7A8K855 629 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 B4E171 279 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 PRMT5O14744 637 aaPredicted RBP10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 LIN7AO14910 233 aaPredicted RBP10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 TP73O15350 636 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 RRP8O43159 456 aaKnown RBP10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 KLK10O43240 276 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 BANF1O75531 89 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 F7P08709 466 aaPredicted RBP10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 OR56A5P0C7T3 313 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 ITGB6P18564 788 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 TSPAN7P41732 249 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 TTPAP49638 278 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 MC2RQ01718 297 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 BOP1Q14137 746 aaKnown RBP10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 PLCL1Q15111 1095 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 TGIF1Q15583 401 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 ANKRD20A4Q4UJ75 823 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 MSS51Q4VC12 460 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 ZNF789Q5FWF6 425 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 CTSL3PQ5NE16 218 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 ANKS6Q68DC2 871 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 IRGCQ6NXR0 463 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 CASC4Q6P4E1 433 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 LRRC69Q6ZNQ3 347 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 FAM92BQ6ZTR7 304 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 PRSS42Q7Z5A4 293 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 ZFAND4Q86XD8 727 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 FAM129CQ86XR2 697 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 VRK3Q8IV63 474 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 KRT222Q8N1A0 295 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 ZFPM2Q8WW38 1151 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 LPGAT1Q92604 370 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 ZNF669Q96BR6 464 aaPredicted RBP10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 BIRC8Q96P09 236 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 TAAR9Q96RI9 348 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 TRIM51Q9BSJ1 452 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 B3GNT4Q9C0J1 378 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 ZNF768Q9H5H4 540 aaKnown RBP10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 APMAPQ9HDC9 416 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 AKAP7Q9P0M2 348 aaPredicted RBP10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 SEMA5BQ9P283 1151 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 ASIC3Q9UHC3 531 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 LHX6Q9UPM6 363 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 B3GALT1Q9Y5Z6 326 aa10.7□□□□□ -0.7
SHKBP1-206ENST00000595523 TLN1Q9Y490 2541 aaKnown RBP10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 IGHV5-51A0A0C4DH38 117 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms