RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 RETREG1Q9H6L5 497 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 CYP4F12Q9HCS2 524 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 TMEM248Q9NWD8 314 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 MKS1Q9NXB0 559 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 NKIRAS1Q9NYS0 192 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 RSPH14Q9UHP6 348 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 ERRFI1Q9UJM3 462 aaPredicted RBP12.66□□□□□ -0.38
SCAF1-202ENST00000595242 PCDHB3Q9Y5E6 796 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 HIVEP1P15822 2718 aa12.65□□□□□ -0.38
SCAF1-202ENST00000595242 FOXO6A8MYZ6 492 aa12.65□□□□□ -0.38
SCAF1-202ENST00000595242 EBAG9O00559 213 aa12.65□□□□□ -0.38
SCAF1-202ENST00000595242 MATN3O15232 486 aa12.65□□□□□ -0.38
SCAF1-202ENST00000595242 RFPL1O75677 317 aa12.65□□□□□ -0.38
SCAF1-202ENST00000595242 ASMTLO95671 621 aa12.65□□□□□ -0.38
SCAF1-202ENST00000595242 LDLRP01130 860 aa12.65□□□□□ -0.38
SCAF1-202ENST00000595242 INHBAP08476 426 aa12.65□□□□□ -0.38
SCAF1-202ENST00000595242 NFKB1P19838 968 aa12.65□□□□□ -0.38
SCAF1-202ENST00000595242 CCNFP41002 786 aa12.65□□□□□ -0.38
SCAF1-202ENST00000595242 SNRPD1P62314 119 aaKnown RBP12.65□□□□□ -0.38
SCAF1-202ENST00000595242 SLC18A2Q05940 514 aa12.65□□□□□ -0.38
SCAF1-202ENST00000595242 MYLK3Q32MK0 819 aa12.65□□□□□ -0.38
SCAF1-202ENST00000595242 RWDD4Q6NW29 188 aaKnown RBP12.65□□□□□ -0.38
SCAF1-202ENST00000595242 GDPD4Q6W3E5 623 aa12.65□□□□□ -0.38
SCAF1-202ENST00000595242 SH2D5Q6ZV89 423 aa12.65□□□□□ -0.38
SCAF1-202ENST00000595242 C17orf82Q86X59 251 aaPredicted RBP12.65□□□□□ -0.38
SCAF1-202ENST00000595242 ATPAF2Q8N5M1 289 aa12.65□□□□□ -0.38
SCAF1-202ENST00000595242 CNTD1Q8N815 330 aa12.65□□□□□ -0.38
SCAF1-202ENST00000595242 NETO2Q8NC67 525 aa12.65□□□□□ -0.38
SCAF1-202ENST00000595242 OR2AP1Q8NGE2 309 aa12.65□□□□□ -0.38
SCAF1-202ENST00000595242 OR56A4Q8NGH8 313 aa12.65□□□□□ -0.38
SCAF1-202ENST00000595242 TCTN2Q96GX1 697 aa12.65□□□□□ -0.38
SCAF1-202ENST00000595242 MAGEB18Q96M61 343 aa12.65□□□□□ -0.38
SCAF1-202ENST00000595242 FCRL5Q96RD9 977 aa12.65□□□□□ -0.38
SCAF1-202ENST00000595242 MLPHQ9BV36 600 aaPredicted RBP12.65□□□□□ -0.38
SCAF1-202ENST00000595242 ZYG11BQ9C0D3 744 aa12.65□□□□□ -0.38
SCAF1-202ENST00000595242 SLC39A8Q9C0K1 460 aa12.65□□□□□ -0.38
SCAF1-202ENST00000595242 NSRP1Q9H0G5 558 aaKnown RBP12.65□□□□□ -0.38
SCAF1-202ENST00000595242 TRIT1Q9H3H1 467 aaKnown RBP12.65□□□□□ -0.38
SCAF1-202ENST00000595242 LRRC40Q9H9A6 602 aa12.65□□□□□ -0.38
SCAF1-202ENST00000595242 FGF22Q9HCT0 170 aa12.65□□□□□ -0.38
SCAF1-202ENST00000595242 KCNK9Q9NPC2 374 aa12.65□□□□□ -0.38
SCAF1-202ENST00000595242 SMYD2Q9NRG4 433 aa12.65□□□□□ -0.38
SCAF1-202ENST00000595242 SPATS2LQ9NUQ6 558 aaKnown RBP12.65□□□□□ -0.38
SCAF1-202ENST00000595242 TMEM9Q9P0T7 183 aa12.65□□□□□ -0.38
SCAF1-202ENST00000595242 ZNF212Q9UDV6 495 aa12.65□□□□□ -0.38
SCAF1-202ENST00000595242 SVILO95425 2214 aa12.65□□□□□ -0.38
SCAF1-202ENST00000595242 AKAP9Q99996 3911 aa12.65□□□□□ -0.39
SCAF1-202ENST00000595242 NF1P21359 2839 aa12.64□□□□□ -0.39
SCAF1-202ENST00000595242 A0A1W2PPM1 405 aa12.64□□□□□ -0.39
SCAF1-202ENST00000595242 TM9SF1O15321 606 aa12.64□□□□□ -0.39
SCAF1-202ENST00000595242 STK17BO94768 372 aa12.64□□□□□ -0.39
SCAF1-202ENST00000595242 ZWINTO95229 277 aa12.64□□□□□ -0.39
SCAF1-202ENST00000595242 GSRP00390 522 aa12.64□□□□□ -0.39
SCAF1-202ENST00000595242 PCCBP05166 539 aa12.64□□□□□ -0.39
SCAF1-202ENST00000595242 FURINP09958 794 aa12.64□□□□□ -0.39
SCAF1-202ENST00000595242 CNTFP26441 200 aa12.64□□□□□ -0.39
SCAF1-202ENST00000595242 CSF2RBP32927 897 aa12.64□□□□□ -0.39
SCAF1-202ENST00000595242 GPR3P46089 330 aa12.64□□□□□ -0.39
SCAF1-202ENST00000595242 SERPINB9P50453 376 aa12.64□□□□□ -0.39
SCAF1-202ENST00000595242 WDR4P57081 412 aaKnown RBP12.64□□□□□ -0.39
SCAF1-202ENST00000595242 GNA12Q03113 381 aa12.64□□□□□ -0.39
SCAF1-202ENST00000595242 NIPAL4Q0D2K0 466 aa12.64□□□□□ -0.39
SCAF1-202ENST00000595242 BIRC2Q13490 618 aa12.64□□□□□ -0.39
SCAF1-202ENST00000595242 MTM1Q13496 603 aa12.64□□□□□ -0.39
SCAF1-202ENST00000595242 ERV3-1Q14264 604 aa12.64□□□□□ -0.39
SCAF1-202ENST00000595242 POLD3Q15054 466 aaPredicted RBP12.64□□□□□ -0.39
SCAF1-202ENST00000595242 NADK2Q4G0N4 442 aa12.64□□□□□ -0.39
SCAF1-202ENST00000595242 TMEM52BQ4KMG9 183 aa12.64□□□□□ -0.39
SCAF1-202ENST00000595242 SPANXN3Q5MJ09 141 aa12.64□□□□□ -0.39
SCAF1-202ENST00000595242 FAM182AQ5T1J6 154 aa12.64□□□□□ -0.39
SCAF1-202ENST00000595242 PIGWQ7Z7B1 504 aa12.64□□□□□ -0.39
SCAF1-202ENST00000595242 BANPQ8N9N5 519 aa12.64□□□□□ -0.39
SCAF1-202ENST00000595242 ZDHHC1Q8WTX9 485 aa12.64□□□□□ -0.39
SCAF1-202ENST00000595242 PDCD6IPQ8WUM4 868 aaKnown RBP12.64□□□□□ -0.39
SCAF1-202ENST00000595242 MTBPQ96DY7 904 aa12.64□□□□□ -0.39
SCAF1-202ENST00000595242 OXNAD1Q96HP4 312 aaPredicted RBP12.64□□□□□ -0.39
SCAF1-202ENST00000595242 CELF6Q96J87 481 aaKnown RBP12.64□□□□□ -0.39
SCAF1-202ENST00000595242 CEP41Q9BYV8 373 aa12.64□□□□□ -0.39
SCAF1-202ENST00000595242 NOL6Q9H6R4 1146 aaKnown RBP12.64□□□□□ -0.39
SCAF1-202ENST00000595242 PRDM4Q9UKN5 801 aa12.64□□□□□ -0.39
SCAF1-202ENST00000595242 POLHQ9Y253 713 aa12.64□□□□□ -0.39
SCAF1-202ENST00000595242 TMEM184BQ9Y519 407 aaPredicted RBP12.64□□□□□ -0.39
SCAF1-202ENST00000595242 MAD1L1Q9Y6D9 718 aa12.64□□□□□ -0.39
SCAF1-202ENST00000595242 IKBKGQ9Y6K9 419 aa12.64□□□□□ -0.39
SCAF1-202ENST00000595242 MDC1Q14676 2089 aaKnown RBP12.64□□□□□ -0.39
SCAF1-202ENST00000595242 ARHGAP42A6NI28 874 aa12.63□□□□□ -0.39
SCAF1-202ENST00000595242 CACNB4O00305 520 aaPredicted RBP12.63□□□□□ -0.39
SCAF1-202ENST00000595242 FGF1P05230 155 aa12.63□□□□□ -0.39
SCAF1-202ENST00000595242 SNRPAP09012 282 aaKnown RBP12.63□□□□□ -0.39
SCAF1-202ENST00000595242 CCNB1P14635 433 aa12.63□□□□□ -0.39
SCAF1-202ENST00000595242 F8A1P23610 371 aa12.63□□□□□ -0.39
SCAF1-202ENST00000595242 MGAT1P26572 445 aa12.63□□□□□ -0.39
SCAF1-202ENST00000595242 STAT5AP42229 794 aa12.63□□□□□ -0.39
SCAF1-202ENST00000595242 MAPKAPK2P49137 400 aa12.63□□□□□ -0.39
SCAF1-202ENST00000595242 NPY2RP49146 381 aa12.63□□□□□ -0.39
SCAF1-202ENST00000595242 MC2RQ01718 297 aa12.63□□□□□ -0.39
SCAF1-202ENST00000595242 ELP6Q0PNE2 266 aa12.63□□□□□ -0.39
SCAF1-202ENST00000595242 SQSTM1Q13501 440 aa12.63□□□□□ -0.39
SCAF1-202ENST00000595242 SPARCL1Q14515 664 aa12.63□□□□□ -0.39
SCAF1-202ENST00000595242 PRPSAP1Q14558 356 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms