RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 MPP5Q8N3R9 675 aa17.31■□□□□ 0.36
SHKBP1-204ENST00000594862 OR6P1Q8NGX9 317 aa17.31■□□□□ 0.36
SHKBP1-204ENST00000594862 OR4L1Q8NH43 312 aa17.31■□□□□ 0.36
SHKBP1-204ENST00000594862 KLHL6Q8WZ60 621 aa17.31■□□□□ 0.36
SHKBP1-204ENST00000594862 EFHD1Q9BUP0 239 aa17.31■□□□□ 0.36
SHKBP1-204ENST00000594862 SEMA5BQ9P283 1151 aa17.31■□□□□ 0.36
SHKBP1-204ENST00000594862 CCDC78A2IDD5 438 aa17.3■□□□□ 0.36
SHKBP1-204ENST00000594862 CES2O00748 559 aa17.3■□□□□ 0.36
SHKBP1-204ENST00000594862 KDM1AO60341 852 aa17.3■□□□□ 0.36
SHKBP1-204ENST00000594862 GOT2P00505 430 aaKnown RBP17.3■□□□□ 0.36
SHKBP1-204ENST00000594862 MAP4P27816 1152 aaKnown RBP17.3■□□□□ 0.36
SHKBP1-204ENST00000594862 LEPRP48357 1165 aaKnown RBP17.3■□□□□ 0.36
SHKBP1-204ENST00000594862 TTPAP49638 278 aa17.3■□□□□ 0.36
SHKBP1-204ENST00000594862 MAP7Q14244 749 aa17.3■□□□□ 0.36
SHKBP1-204ENST00000594862 TGIF1Q15583 401 aa17.3■□□□□ 0.36
SHKBP1-204ENST00000594862 SYTL3Q4VX76 610 aa17.3■□□□□ 0.36
SHKBP1-204ENST00000594862 DNTTIP2Q5QJE6 756 aaKnown RBP17.3■□□□□ 0.36
SHKBP1-204ENST00000594862 PRUNE1Q86TP1 453 aa17.3■□□□□ 0.36
SHKBP1-204ENST00000594862 BPHLQ86WA6 291 aaPredicted RBP17.3■□□□□ 0.36
SHKBP1-204ENST00000594862 CLDN19Q8N6F1 224 aa17.3■□□□□ 0.36
SHKBP1-204ENST00000594862 IL22RA1Q8N6P7 574 aa17.3■□□□□ 0.36
SHKBP1-204ENST00000594862 MAGOHBQ96A72 148 aaKnown RBP17.3■□□□□ 0.36
SHKBP1-204ENST00000594862 KIAA1143Q96AT1 154 aaPredicted RBP17.3■□□□□ 0.36
SHKBP1-204ENST00000594862 OR52A5Q9H2C5 316 aa17.3■□□□□ 0.36
SHKBP1-204ENST00000594862 MRM3Q9HC36 420 aaKnown RBP17.3■□□□□ 0.36
SHKBP1-204ENST00000594862 HRASLS2Q9NWW9 162 aa17.3■□□□□ 0.36
SHKBP1-204ENST00000594862 TMEM184BQ9Y519 407 aaPredicted RBP17.3■□□□□ 0.36
SHKBP1-204ENST00000594862 CFAP20Q9Y6A4 193 aaKnown RBP17.3■□□□□ 0.36
SHKBP1-204ENST00000594862 PFDN6O15212 129 aa17.29■□□□□ 0.36
SHKBP1-204ENST00000594862 EFSO43281 561 aa17.29■□□□□ 0.36
SHKBP1-204ENST00000594862 RAD1O60671 282 aa17.29■□□□□ 0.36
SHKBP1-204ENST00000594862 NELFEP18615 380 aaKnown RBP17.29■□□□□ 0.36
SHKBP1-204ENST00000594862 MAGEA6P43360 314 aa17.29■□□□□ 0.36
SHKBP1-204ENST00000594862 KCNJ1P48048 391 aa17.29■□□□□ 0.36
SHKBP1-204ENST00000594862 ARL4DP49703 201 aa17.29■□□□□ 0.36
SHKBP1-204ENST00000594862 SESN2P58004 480 aaPredicted RBP17.29■□□□□ 0.36
SHKBP1-204ENST00000594862 FOXM1Q08050 763 aa17.29■□□□□ 0.36
SHKBP1-204ENST00000594862 CYP1B1Q16678 543 aa17.29■□□□□ 0.36
SHKBP1-204ENST00000594862 ZNF658BQ4V348 819 aaPredicted RBP17.29■□□□□ 0.36
SHKBP1-204ENST00000594862 DUS1LQ6P1R4 473 aaKnown RBP17.29■□□□□ 0.36
SHKBP1-204ENST00000594862 LRRC8BQ6P9F7 803 aa17.29■□□□□ 0.36
SHKBP1-204ENST00000594862 XKR5Q6UX68 686 aa17.29■□□□□ 0.36
SHKBP1-204ENST00000594862 FAM92BQ6ZTR7 304 aa17.29■□□□□ 0.36
SHKBP1-204ENST00000594862 REXO1L1PQ8IX06 675 aa17.29■□□□□ 0.36
SHKBP1-204ENST00000594862 CACNA2D3Q8IZS8 1091 aa17.29■□□□□ 0.36
SHKBP1-204ENST00000594862 NLGN4XQ8N0W4 816 aa17.29■□□□□ 0.36
SHKBP1-204ENST00000594862 SPDYE1Q8NFV5 336 aaPredicted RBP17.29■□□□□ 0.36
SHKBP1-204ENST00000594862 NLGN4YQ8NFZ3 816 aaPredicted RBP17.29■□□□□ 0.36
SHKBP1-204ENST00000594862 ACTRT1Q8TDG2 376 aa17.29■□□□□ 0.36
SHKBP1-204ENST00000594862 GRK7Q8WTQ7 553 aa17.29■□□□□ 0.36
SHKBP1-204ENST00000594862 ELMO1Q92556 727 aa17.29■□□□□ 0.36
SHKBP1-204ENST00000594862 NKD1Q969G9 470 aa17.29■□□□□ 0.36
SHKBP1-204ENST00000594862 PMEPA1Q969W9 287 aa17.29■□□□□ 0.36
SHKBP1-204ENST00000594862 PDE7BQ9NP56 450 aa17.29■□□□□ 0.36
SHKBP1-204ENST00000594862 CATSPERZQ9NTU4 200 aa17.29■□□□□ 0.36
SHKBP1-204ENST00000594862 AHCTF1Q8WYP5 2266 aa17.29■□□□□ 0.36
SHKBP1-204ENST00000594862 SDK2Q58EX2 2172 aa17.29■□□□□ 0.36
SHKBP1-204ENST00000594862 FLNBO75369 2602 aaKnown RBP17.29■□□□□ 0.36
SHKBP1-204ENST00000594862 UBA6A0AVT1 1052 aaPredicted RBP17.28■□□□□ 0.36
SHKBP1-204ENST00000594862 OR51F1A6NGY5 319 aa17.28■□□□□ 0.36
SHKBP1-204ENST00000594862 STK17BO94768 372 aa17.28■□□□□ 0.36
SHKBP1-204ENST00000594862 PRSS56P0CW18 603 aa17.28■□□□□ 0.36
SHKBP1-204ENST00000594862 SEPHS1P49903 392 aa17.28■□□□□ 0.36
SHKBP1-204ENST00000594862 ACY1Q03154 408 aa17.28■□□□□ 0.36
SHKBP1-204ENST00000594862 BOP1Q14137 746 aaKnown RBP17.28■□□□□ 0.36
SHKBP1-204ENST00000594862 TAF1BQ53T94 588 aaPredicted RBP17.28■□□□□ 0.36
SHKBP1-204ENST00000594862 LRRC6Q86X45 466 aa17.28■□□□□ 0.36
SHKBP1-204ENST00000594862 SLC35F6Q8N357 371 aa17.28■□□□□ 0.36
SHKBP1-204ENST00000594862 ESX1Q8N693 406 aa17.28■□□□□ 0.36
SHKBP1-204ENST00000594862 SIDT2Q8NBJ9 832 aaKnown RBP17.28■□□□□ 0.36
SHKBP1-204ENST00000594862 NAT14Q8WUY8 206 aa17.28■□□□□ 0.36
SHKBP1-204ENST00000594862 LCN9Q8WX39 176 aa17.28■□□□□ 0.36
SHKBP1-204ENST00000594862 SLC41A2Q96JW4 573 aa17.28■□□□□ 0.36
SHKBP1-204ENST00000594862 FCRL4Q96PJ5 515 aa17.28■□□□□ 0.36
SHKBP1-204ENST00000594862 FERD3LQ96RJ6 166 aa17.28■□□□□ 0.36
SHKBP1-204ENST00000594862 OSBPL9Q96SU4 736 aa17.28■□□□□ 0.36
SHKBP1-204ENST00000594862 SRMSQ9H3Y6 488 aa17.28■□□□□ 0.36
SHKBP1-204ENST00000594862 TFB2MQ9H5Q4 396 aaKnown RBP17.28■□□□□ 0.36
SHKBP1-204ENST00000594862 SLC2A6Q9UGQ3 507 aa17.28■□□□□ 0.36
SHKBP1-204ENST00000594862 PILRAQ9UKJ1 303 aa17.28■□□□□ 0.36
SHKBP1-204ENST00000594862 MGAQ8IWI9 3026 aa17.28■□□□□ 0.36
SHKBP1-204ENST00000594862 MAP3K7O43318 606 aa17.27■□□□□ 0.36
SHKBP1-204ENST00000594862 ZBTB11O95625 1053 aaPredicted RBP17.27■□□□□ 0.36
SHKBP1-204ENST00000594862 KRT14P02533 472 aa17.27■□□□□ 0.36
SHKBP1-204ENST00000594862 MT-ND3P03897 115 aa17.27■□□□□ 0.36
SHKBP1-204ENST00000594862 ITGB2P05107 769 aa17.27■□□□□ 0.36
SHKBP1-204ENST00000594862 FGF5P12034 268 aa17.27■□□□□ 0.36
SHKBP1-204ENST00000594862 MLNP12872 115 aa17.27■□□□□ 0.36
SHKBP1-204ENST00000594862 PAMP19021 973 aa17.27■□□□□ 0.36
SHKBP1-204ENST00000594862 FNTAP49354 379 aa17.27■□□□□ 0.36
SHKBP1-204ENST00000594862 HSD11B2P80365 405 aa17.27■□□□□ 0.36
SHKBP1-204ENST00000594862 ABHD18Q0P651 414 aa17.27■□□□□ 0.36
SHKBP1-204ENST00000594862 GPS1Q13098 491 aa17.27■□□□□ 0.36
SHKBP1-204ENST00000594862 TMED2Q15363 201 aa17.27■□□□□ 0.36
SHKBP1-204ENST00000594862 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.27■□□□□ 0.36
SHKBP1-204ENST00000594862 TMTC4Q5T4D3 741 aa17.27■□□□□ 0.36
SHKBP1-204ENST00000594862 RNF187Q5TA31 235 aaPredicted RBP17.27■□□□□ 0.36
SHKBP1-204ENST00000594862 CCDC137Q6PK04 289 aaKnown RBP17.27■□□□□ 0.36
SHKBP1-204ENST00000594862 ZNF534Q76KX8 674 aa17.27■□□□□ 0.36
SHKBP1-204ENST00000594862 LILRA3Q8N6C8 439 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms