RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 SGTAO43765 313 aa19.25■□□□□ 0.67
LSM4-203ENST00000593829 SNX2O60749 519 aa19.25■□□□□ 0.67
LSM4-203ENST00000593829 UNC5CO95185 931 aa19.25■□□□□ 0.67
LSM4-203ENST00000593829 ACSL3O95573 720 aa19.25■□□□□ 0.67
LSM4-203ENST00000593829 STX2P32856 288 aa19.25■□□□□ 0.67
LSM4-203ENST00000593829 NSG1P42857 185 aa19.25■□□□□ 0.67
LSM4-203ENST00000593829 E2F1Q01094 437 aa19.25■□□□□ 0.67
LSM4-203ENST00000593829 MPP2Q14168 576 aa19.25■□□□□ 0.67
LSM4-203ENST00000593829 ANKRD20A4Q4UJ75 823 aa19.25■□□□□ 0.67
LSM4-203ENST00000593829 KIAA0930Q6ICG6 404 aaPredicted RBP19.25■□□□□ 0.67
LSM4-203ENST00000593829 CGB2Q6NT52 195 aa19.25■□□□□ 0.67
LSM4-203ENST00000593829 PACS1Q6VY07 963 aa19.25■□□□□ 0.67
LSM4-203ENST00000593829 TMEM135Q86UB9 458 aa19.25■□□□□ 0.67
LSM4-203ENST00000593829 PDIK1LQ8N165 341 aa19.25■□□□□ 0.67
LSM4-203ENST00000593829 AGGF1Q8N302 714 aaeCLIP19.25■□□□□ 0.67
LSM4-203ENST00000593829 BEND7Q8N7W2 519 aaPredicted RBP19.25■□□□□ 0.67
LSM4-203ENST00000593829 NAT14Q8WUY8 206 aa19.25■□□□□ 0.67
LSM4-203ENST00000593829 CCDC77Q9BR77 488 aa19.25■□□□□ 0.67
LSM4-203ENST00000593829 TXLNGQ9NUQ3 528 aa19.25■□□□□ 0.67
LSM4-203ENST00000593829 NKIRAS1Q9NYS0 192 aa19.25■□□□□ 0.67
LSM4-203ENST00000593829 RPS6KL1Q9Y6S9 549 aa19.25■□□□□ 0.67
LSM4-203ENST00000593829 CACNA1AO00555 2505 aa19.24■□□□□ 0.67
LSM4-203ENST00000593829 CCDC189A1A4V9 331 aa19.24■□□□□ 0.67
LSM4-203ENST00000593829 KLHL33A6NCF5 533 aa19.24■□□□□ 0.67
LSM4-203ENST00000593829 PRR19A6NJB7 356 aa19.24■□□□□ 0.67
LSM4-203ENST00000593829 AP2A2O94973 939 aa19.24■□□□□ 0.67
LSM4-203ENST00000593829 SLC2A4P14672 509 aa19.24■□□□□ 0.67
LSM4-203ENST00000593829 CREB1P16220 341 aa19.24■□□□□ 0.67
LSM4-203ENST00000593829 GLB1P16278 677 aa19.24■□□□□ 0.67
LSM4-203ENST00000593829 ARNTP27540 789 aa19.24■□□□□ 0.67
LSM4-203ENST00000593829 DMPKQ09013 629 aa19.24■□□□□ 0.67
LSM4-203ENST00000593829 DHRS13Q6UX07 377 aa19.24■□□□□ 0.67
LSM4-203ENST00000593829 RAB44Q7Z6P3 723 aaPredicted RBP19.24■□□□□ 0.67
LSM4-203ENST00000593829 ARL14Q8N4G2 192 aa19.24■□□□□ 0.67
LSM4-203ENST00000593829 MGARPQ8TDB4 240 aa19.24■□□□□ 0.67
LSM4-203ENST00000593829 PATE1Q8WXA2 126 aa19.24■□□□□ 0.67
LSM4-203ENST00000593829 ZNF669Q96BR6 464 aaPredicted RBP19.24■□□□□ 0.67
LSM4-203ENST00000593829 LINC00615Q96LM1 132 aaPredicted RBP19.24■□□□□ 0.67
LSM4-203ENST00000593829 ZNF570Q96NI8 536 aa19.24■□□□□ 0.67
LSM4-203ENST00000593829 TRIM56Q9BRZ2 755 aaKnown RBP19.24■□□□□ 0.67
LSM4-203ENST00000593829 KCNK9Q9NPC2 374 aa19.24■□□□□ 0.67
LSM4-203ENST00000593829 PRDM8Q9NQV8 689 aa19.24■□□□□ 0.67
LSM4-203ENST00000593829 NUDT21O43809 227 aaKnown RBP19.23■□□□□ 0.67
LSM4-203ENST00000593829 USP1O94782 785 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 EML2O95834 649 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 F3P13726 295 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 TAC1P20366 129 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 IDSP22304 550 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 PRLHRP49683 370 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 MAZP56270 477 aaKnown RBP19.23■□□□□ 0.67
LSM4-203ENST00000593829 FOXC1Q12948 553 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 SEMA3AQ14563 771 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 BBS9Q3SYG4 887 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 CMPK2Q5EBM0 449 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 PERM1Q5SV97 790 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 IYDQ6PHW0 289 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 CLDN19Q8N6F1 224 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 FBF1Q8TES7 1133 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 THOC1Q96FV9 657 aaKnown RBP19.23■□□□□ 0.67
LSM4-203ENST00000593829 FCRL3Q96P31 734 aaPredicted RBP19.23■□□□□ 0.67
LSM4-203ENST00000593829 TMEM237Q96Q45 408 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 MARCH4Q9P2E8 410 aaPredicted RBP19.23■□□□□ 0.67
LSM4-203ENST00000593829 GOLGA4Q13439 2230 aaKnown RBP19.23■□□□□ 0.67
LSM4-203ENST00000593829 MED19A0JLT2 244 aaPredicted RBP19.23■□□□□ 0.67
LSM4-203ENST00000593829 A6NCN8 305 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 MGAT4DA6NG13 374 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 OR5K4A6NMS3 321 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 CLGNO14967 610 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 POLBP06746 335 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 PBLDP30039 288 aaPredicted RBP19.23■□□□□ 0.67
LSM4-203ENST00000593829 ARCN1P48444 511 aaKnown RBP19.23■□□□□ 0.67
LSM4-203ENST00000593829 TTPAP49638 278 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 ARL4CP56559 192 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 BIRC2Q13490 618 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 ZKSCAN8Q15776 578 aaPredicted RBP19.23■□□□□ 0.67
LSM4-203ENST00000593829 HIF1AQ16665 826 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 MSS51Q4VC12 460 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 MRNIPQ6NTE8 343 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 SFRP1Q8N474 314 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 CHCHD4Q8N4Q1 142 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 OR2L2Q8NH16 312 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 MAPK15Q8TD08 544 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 CCDC74AQ96AQ1 378 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 NAT9Q9BTE0 207 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 ABCG4Q9H172 646 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 LRMDAQ9H2I8 198 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 VPS37BQ9H9H4 285 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 LRIT1Q9P2V4 623 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 RNF215Q9Y6U7 377 aa19.23■□□□□ 0.67
LSM4-203ENST00000593829 TRBV23OR9-2A0A075B6M9 112 aa19.22■□□□□ 0.67
LSM4-203ENST00000593829 PDZK1P1A8MUH7 402 aa19.22■□□□□ 0.67
LSM4-203ENST00000593829 QSOX1O00391 747 aa19.22■□□□□ 0.67
LSM4-203ENST00000593829 PGAM1P18669 254 aa19.22■□□□□ 0.67
LSM4-203ENST00000593829 PMLP29590 882 aa19.22■□□□□ 0.67
LSM4-203ENST00000593829 WASH2PQ6VEQ5 465 aa19.22■□□□□ 0.67
LSM4-203ENST00000593829 LDB1Q86U70 411 aaPredicted RBP19.22■□□□□ 0.67
LSM4-203ENST00000593829 TDRPQ86YL5 185 aa19.22■□□□□ 0.67
LSM4-203ENST00000593829 ANKRD42Q8N9B4 389 aa19.22■□□□□ 0.67
LSM4-203ENST00000593829 CFAP61Q8NHU2 1237 aa19.22■□□□□ 0.67
LSM4-203ENST00000593829 RMDN2Q96LZ7 410 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms