RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 LUZP4Q9P127 313 aa15.91■□□□□ 0.14
LIG1-205ENST00000593425 POMT2Q9UKY4 750 aa15.91■□□□□ 0.14
LIG1-205ENST00000593425 SNX7Q9UNH6 387 aa15.91■□□□□ 0.14
LIG1-205ENST00000593425 SEMA7AO75326 666 aa15.9■□□□□ 0.14
LIG1-205ENST00000593425 TMEM63AO94886 807 aa15.9■□□□□ 0.14
LIG1-205ENST00000593425 KLK3P07288 261 aaPredicted RBP15.9■□□□□ 0.14
LIG1-205ENST00000593425 RAB40ALP0C0E4 278 aa15.9■□□□□ 0.14
LIG1-205ENST00000593425 RBL1P28749 1068 aa15.9■□□□□ 0.14
LIG1-205ENST00000593425 GSDMDP57764 484 aa15.9■□□□□ 0.14
LIG1-205ENST00000593425 XIAPP98170 497 aa15.9■□□□□ 0.14
LIG1-205ENST00000593425 GSE1Q14687 1217 aa15.9■□□□□ 0.14
LIG1-205ENST00000593425 TAF1AQ15573 450 aaPredicted RBP15.9■□□□□ 0.14
LIG1-205ENST00000593425 FAM198BQ6UWH4 519 aa15.9■□□□□ 0.14
LIG1-205ENST00000593425 MICALCLQ6ZW33 695 aa15.9■□□□□ 0.14
LIG1-205ENST00000593425 VSTM4Q8IW00 320 aa15.9■□□□□ 0.14
LIG1-205ENST00000593425 CFAP206Q8IYR0 622 aa15.9■□□□□ 0.14
LIG1-205ENST00000593425 FDCSPQ8NFU4 85 aa15.9■□□□□ 0.14
LIG1-205ENST00000593425 OR1L3Q8NH93 324 aa15.9■□□□□ 0.14
LIG1-205ENST00000593425 CPT1BQ92523 772 aa15.9■□□□□ 0.14
LIG1-205ENST00000593425 CLIP3Q96DZ5 547 aa15.9■□□□□ 0.14
LIG1-205ENST00000593425 APOL2Q9BQE5 337 aa15.9■□□□□ 0.14
LIG1-205ENST00000593425 NUDT9Q9BW91 350 aa15.9■□□□□ 0.14
LIG1-205ENST00000593425 C1GALT1Q9NS00 363 aa15.9■□□□□ 0.14
LIG1-205ENST00000593425 PCMTD2Q9NV79 361 aa15.9■□□□□ 0.14
LIG1-205ENST00000593425 PLEKHB1Q9UF11 243 aaPredicted RBP15.9■□□□□ 0.14
LIG1-205ENST00000593425 TCFL5Q9UL49 500 aa15.9■□□□□ 0.14
LIG1-205ENST00000593425 INTUQ9ULD6 942 aa15.9■□□□□ 0.14
LIG1-205ENST00000593425 ALG6Q9Y672 507 aa15.9■□□□□ 0.14
LIG1-205ENST00000593425 USP9XQ93008 2570 aaPredicted RBP15.89■□□□□ 0.13
LIG1-205ENST00000593425 GSAPA4D1B5 854 aa15.89■□□□□ 0.13
LIG1-205ENST00000593425 AGAP14A8MT82 685 aa15.89■□□□□ 0.13
LIG1-205ENST00000593425 HACD1B0YJ81 288 aa15.89■□□□□ 0.13
LIG1-205ENST00000593425 TMEM150CB9EJG8 249 aa15.89■□□□□ 0.13
LIG1-205ENST00000593425 ST6GAL1P15907 406 aa15.89■□□□□ 0.13
LIG1-205ENST00000593425 NDUFS1P28331 727 aa15.89■□□□□ 0.13
LIG1-205ENST00000593425 PRLHRP49683 370 aa15.89■□□□□ 0.13
LIG1-205ENST00000593425 GEMP55040 296 aa15.89■□□□□ 0.13
LIG1-205ENST00000593425 ITGA1P56199 1179 aa15.89■□□□□ 0.13
LIG1-205ENST00000593425 PRKAA1Q13131 559 aa15.89■□□□□ 0.13
LIG1-205ENST00000593425 CCDC50Q8IVM0 306 aa15.89■□□□□ 0.13
LIG1-205ENST00000593425 SYTL1Q8IYJ3 562 aa15.89■□□□□ 0.13
LIG1-205ENST00000593425 KATNAL2Q8IYT4 538 aa15.89■□□□□ 0.13
LIG1-205ENST00000593425 Q8NA96 180 aa15.89■□□□□ 0.13
LIG1-205ENST00000593425 ACVR1CQ8NER5 493 aa15.89■□□□□ 0.13
LIG1-205ENST00000593425 OR13C4Q8NGS5 318 aa15.89■□□□□ 0.13
LIG1-205ENST00000593425 HM13Q8TCT9 377 aa15.89■□□□□ 0.13
LIG1-205ENST00000593425 ANP32EQ9BTT0 268 aa15.89■□□□□ 0.13
LIG1-205ENST00000593425 NLNQ9BYT8 704 aa15.89■□□□□ 0.13
LIG1-205ENST00000593425 FAM96AQ9H5X1 160 aa15.89■□□□□ 0.13
LIG1-205ENST00000593425 FANCEQ9HB96 536 aa15.89■□□□□ 0.13
LIG1-205ENST00000593425 CRLS1Q9UJA2 301 aa15.89■□□□□ 0.13
LIG1-205ENST00000593425 TRHDEQ9UKU6 1024 aa15.89■□□□□ 0.13
LIG1-205ENST00000593425 ZNF451Q9Y4E5 1061 aa15.89■□□□□ 0.13
LIG1-205ENST00000593425 COLEC10Q9Y6Z7 277 aa15.89■□□□□ 0.13
LIG1-205ENST00000593425 USP9YO00507 2555 aaPredicted RBP15.89■□□□□ 0.13
LIG1-205ENST00000593425 SPTBP11277 2137 aa15.88■□□□□ 0.13
LIG1-205ENST00000593425 KLHL33A6NCF5 533 aa15.88■□□□□ 0.13
LIG1-205ENST00000593425 C2orf81A6NN90 581 aa15.88■□□□□ 0.13
LIG1-205ENST00000593425 BTN3A3O00478 584 aa15.88■□□□□ 0.13
LIG1-205ENST00000593425 BTN3A1O00481 513 aa15.88■□□□□ 0.13
LIG1-205ENST00000593425 CCL22O00626 93 aa15.88■□□□□ 0.13
LIG1-205ENST00000593425 ZNF185O15231 689 aa15.88■□□□□ 0.13
LIG1-205ENST00000593425 CBFA2T2O43439 604 aa15.88■□□□□ 0.13
LIG1-205ENST00000593425 ZRANB2O95218 330 aaKnown RBP eCLIP15.88■□□□□ 0.13
LIG1-205ENST00000593425 ADRA1AP35348 466 aa15.88■□□□□ 0.13
LIG1-205ENST00000593425 LMAN1P49257 510 aa15.88■□□□□ 0.13
LIG1-205ENST00000593425 VAV2P52735 878 aa15.88■□□□□ 0.13
LIG1-205ENST00000593425 HADHBP55084 474 aaKnown RBP15.88■□□□□ 0.13
LIG1-205ENST00000593425 TMPRSS15P98073 1019 aa15.88■□□□□ 0.13
LIG1-205ENST00000593425 MSLNQ13421 630 aaPredicted RBP15.88■□□□□ 0.13
LIG1-205ENST00000593425 KRT33BQ14525 404 aa15.88■□□□□ 0.13
LIG1-205ENST00000593425 INPP5JQ15735 1006 aaPredicted RBP15.88■□□□□ 0.13
LIG1-205ENST00000593425 PTCHD3Q3KNS1 767 aa15.88■□□□□ 0.13
LIG1-205ENST00000593425 JMJD6Q6NYC1 403 aaPredicted RBP15.88■□□□□ 0.13
LIG1-205ENST00000593425 RANBP10Q6VN20 620 aa15.88■□□□□ 0.13
LIG1-205ENST00000593425 ZBTB2Q8N680 514 aa15.88■□□□□ 0.13
LIG1-205ENST00000593425 SSC4DQ8WTU2 575 aa15.88■□□□□ 0.13
LIG1-205ENST00000593425 KRT35Q92764 455 aa15.88■□□□□ 0.13
LIG1-205ENST00000593425 HEMGNQ9BXL5 484 aa15.88■□□□□ 0.13
LIG1-205ENST00000593425 MFRPQ9BY79 579 aa15.88■□□□□ 0.13
LIG1-205ENST00000593425 KLHL25Q9H0H3 589 aa15.88■□□□□ 0.13
LIG1-205ENST00000593425 OR52A5Q9H2C5 316 aa15.88■□□□□ 0.13
LIG1-205ENST00000593425 SRMSQ9H3Y6 488 aa15.88■□□□□ 0.13
LIG1-205ENST00000593425 COG4Q9H9E3 785 aa15.88■□□□□ 0.13
LIG1-205ENST00000593425 ACTR5Q9H9F9 607 aaPredicted RBP15.88■□□□□ 0.13
LIG1-205ENST00000593425 TFR2Q9UP52 801 aa15.88■□□□□ 0.13
LIG1-205ENST00000593425 ICE1Q9Y2F5 2266 aa15.87■□□□□ 0.13
LIG1-205ENST00000593425 FER1L5A0AVI2 2057 aa15.87■□□□□ 0.13
LIG1-205ENST00000593425 C5orf60A6NFR6 353 aa15.87■□□□□ 0.13
LIG1-205ENST00000593425 A6NL46 340 aa15.87■□□□□ 0.13
LIG1-205ENST00000593425 H7C0C1 242 aa15.87■□□□□ 0.13
LIG1-205ENST00000593425 MATN2O00339 956 aa15.87■□□□□ 0.13
LIG1-205ENST00000593425 ANXA9O76027 345 aa15.87■□□□□ 0.13
LIG1-205ENST00000593425 TPM1P09493 284 aa15.87■□□□□ 0.13
LIG1-205ENST00000593425 PYGMP11217 842 aa15.87■□□□□ 0.13
LIG1-205ENST00000593425 PVRP15151 417 aa15.87■□□□□ 0.13
LIG1-205ENST00000593425 CYP2A7P20853 494 aa15.87■□□□□ 0.13
LIG1-205ENST00000593425 PSMB4P28070 264 aa15.87■□□□□ 0.13
LIG1-205ENST00000593425 PRDX3P30048 256 aaKnown RBP15.87■□□□□ 0.13
LIG1-205ENST00000593425 ATP5OP48047 213 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms