RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 POLR2LP62875 67 aaKnown RBP19.33■□□□□ 0.69
CLIP3-206ENST00000593074 GBX1Q14549 363 aa19.33■□□□□ 0.69
CLIP3-206ENST00000593074 TMEM215Q68D42 235 aa19.33■□□□□ 0.69
CLIP3-206ENST00000593074 BRAT1Q6PJG6 821 aa19.33■□□□□ 0.69
CLIP3-206ENST00000593074 MILR1Q7Z6M3 343 aa19.33■□□□□ 0.69
CLIP3-206ENST00000593074 CELF5Q8N6W0 485 aaKnown RBP19.33■□□□□ 0.69
CLIP3-206ENST00000593074 ZUFSPQ96AP4 578 aa19.33■□□□□ 0.69
CLIP3-206ENST00000593074 VPS33AQ96AX1 596 aa19.33■□□□□ 0.69
CLIP3-206ENST00000593074 SLCO4A1Q96BD0 722 aa19.33■□□□□ 0.69
CLIP3-206ENST00000593074 GMPR2Q9P2T1 348 aaKnown RBP19.33■□□□□ 0.69
CLIP3-206ENST00000593074 TMPRSS11EQ9UL52 423 aa19.33■□□□□ 0.69
CLIP3-206ENST00000593074 PCDHA9Q9Y5H5 950 aa19.33■□□□□ 0.69
CLIP3-206ENST00000593074 GRXCR1A8MXD5 290 aa19.32■□□□□ 0.68
CLIP3-206ENST00000593074 CCR7P32248 378 aa19.32■□□□□ 0.68
CLIP3-206ENST00000593074 EMX2Q04743 252 aa19.32■□□□□ 0.68
CLIP3-206ENST00000593074 BNIP2Q12982 314 aa19.32■□□□□ 0.68
CLIP3-206ENST00000593074 GPM6BQ13491 265 aa19.32■□□□□ 0.68
CLIP3-206ENST00000593074 CAPRIN1Q14444 709 aaKnown RBP19.32■□□□□ 0.68
CLIP3-206ENST00000593074 ABRAXAS2Q15018 415 aa19.32■□□□□ 0.68
CLIP3-206ENST00000593074 CYP2R1Q6VVX0 501 aa19.32■□□□□ 0.68
CLIP3-206ENST00000593074 ITFG1Q8TB96 612 aa19.32■□□□□ 0.68
CLIP3-206ENST00000593074 PROKR1Q8TCW9 393 aa19.32■□□□□ 0.68
CLIP3-206ENST00000593074 UHRF1Q96T88 793 aaPredicted RBP19.32■□□□□ 0.68
CLIP3-206ENST00000593074 SMOXQ9NWM0 555 aa19.32■□□□□ 0.68
CLIP3-206ENST00000593074 GEMIN8Q9NWZ8 242 aaKnown RBP19.32■□□□□ 0.68
CLIP3-206ENST00000593074 SUN2Q9UH99 717 aa19.32■□□□□ 0.68
CLIP3-206ENST00000593074 LEF1Q9UJU2 399 aaPredicted RBP19.32■□□□□ 0.68
CLIP3-206ENST00000593074 CCL27Q9Y4X3 112 aa19.32■□□□□ 0.68
CLIP3-206ENST00000593074 ALPK3Q96L96 1907 aa19.32■□□□□ 0.68
CLIP3-206ENST00000593074 GRXCR2A6NFK2 248 aa19.32■□□□□ 0.68
CLIP3-206ENST00000593074 CCDC154A6NI56 674 aa19.32■□□□□ 0.68
CLIP3-206ENST00000593074 K7EPI3 171 aa19.32■□□□□ 0.68
CLIP3-206ENST00000593074 KATNA1O75449 491 aa19.32■□□□□ 0.68
CLIP3-206ENST00000593074 STAMBPO95630 424 aa19.32■□□□□ 0.68
CLIP3-206ENST00000593074 CA3P07451 260 aa19.32■□□□□ 0.68
CLIP3-206ENST00000593074 LINGO3P0C6S8 592 aa19.32■□□□□ 0.68
CLIP3-206ENST00000593074 ZNF30P17039 623 aa19.32■□□□□ 0.68
CLIP3-206ENST00000593074 ATP6V1B2P21281 511 aa19.32■□□□□ 0.68
CLIP3-206ENST00000593074 IL12AP29459 219 aa19.32■□□□□ 0.68
CLIP3-206ENST00000593074 HMOX2P30519 316 aa19.32■□□□□ 0.68
CLIP3-206ENST00000593074 NNMTP40261 264 aa19.32■□□□□ 0.68
CLIP3-206ENST00000593074 FOLH1Q04609 750 aa19.32■□□□□ 0.68
CLIP3-206ENST00000593074 LRRC73Q5JTD7 316 aa19.32■□□□□ 0.68
CLIP3-206ENST00000593074 CDKL4Q5MAI5 379 aa19.32■□□□□ 0.68
CLIP3-206ENST00000593074 ZFAND4Q86XD8 727 aa19.32■□□□□ 0.68
CLIP3-206ENST00000593074 OR2T34Q8NGX1 318 aa19.32■□□□□ 0.68
CLIP3-206ENST00000593074 OR2T3Q8NH03 318 aa19.32■□□□□ 0.68
CLIP3-206ENST00000593074 FRS2Q8WU20 508 aa19.32■□□□□ 0.68
CLIP3-206ENST00000593074 PKD2L2Q9NZM6 624 aa19.32■□□□□ 0.68
CLIP3-206ENST00000593074 CNOT11Q9UKZ1 510 aaKnown RBP19.32■□□□□ 0.68
CLIP3-206ENST00000593074 DYTNA2CJ06 578 aa19.31■□□□□ 0.68
CLIP3-206ENST00000593074 OR56A5P0C7T3 313 aa19.31■□□□□ 0.68
CLIP3-206ENST00000593074 AOAHP28039 575 aa19.31■□□□□ 0.68
CLIP3-206ENST00000593074 GDF5P43026 501 aa19.31■□□□□ 0.68
CLIP3-206ENST00000593074 NFYCQ13952 458 aa19.31■□□□□ 0.68
CLIP3-206ENST00000593074 TLR1Q15399 786 aa19.31■□□□□ 0.68
CLIP3-206ENST00000593074 NR6A1Q15406 480 aa19.31■□□□□ 0.68
CLIP3-206ENST00000593074 PAGE3Q5JUK9 113 aa19.31■□□□□ 0.68
CLIP3-206ENST00000593074 FBXL19Q6PCT2 694 aa19.31■□□□□ 0.68
CLIP3-206ENST00000593074 MYLIPQ8WY64 445 aa19.31■□□□□ 0.68
CLIP3-206ENST00000593074 SMG7Q92540 1137 aaKnown RBP19.31■□□□□ 0.68
CLIP3-206ENST00000593074 TMEM125Q96AQ2 219 aa19.31■□□□□ 0.68
CLIP3-206ENST00000593074 MRGPRX3Q96LB0 322 aa19.31■□□□□ 0.68
CLIP3-206ENST00000593074 NTMT1Q9BV86 223 aa19.31■□□□□ 0.68
CLIP3-206ENST00000593074 MYO7AQ13402 2215 aa19.31■□□□□ 0.68
CLIP3-206ENST00000593074 TSPAN11A1L157 253 aa19.31■□□□□ 0.68
CLIP3-206ENST00000593074 DENRO43583 198 aaKnown RBP19.31■□□□□ 0.68
CLIP3-206ENST00000593074 DCDC1P59894 354 aa19.31■□□□□ 0.68
CLIP3-206ENST00000593074 YBX1P67809 324 aaKnown RBP19.31■□□□□ 0.68
CLIP3-206ENST00000593074 PRKG2Q13237 762 aa19.31■□□□□ 0.68
CLIP3-206ENST00000593074 DHCR24Q15392 516 aa19.31■□□□□ 0.68
CLIP3-206ENST00000593074 SAMD11Q96NU1 681 aa19.31■□□□□ 0.68
CLIP3-206ENST00000593074 HBEGFQ99075 208 aa19.31■□□□□ 0.68
CLIP3-206ENST00000593074 HEPHQ9BQS7 1158 aa19.31■□□□□ 0.68
CLIP3-206ENST00000593074 ABCG8Q9H221 673 aa19.31■□□□□ 0.68
CLIP3-206ENST00000593074 ACTL8Q9H568 366 aa19.31■□□□□ 0.68
CLIP3-206ENST00000593074 DUS2Q9NX74 493 aaKnown RBP19.31■□□□□ 0.68
CLIP3-206ENST00000593074 PDP2Q9P2J9 529 aa19.31■□□□□ 0.68
CLIP3-206ENST00000593074 TRPS1Q9UHF7 1281 aa19.31■□□□□ 0.68
CLIP3-206ENST00000593074 RAB26Q9ULW5 256 aa19.31■□□□□ 0.68
CLIP3-206ENST00000593074 ANGPTL3Q9Y5C1 460 aa19.31■□□□□ 0.68
CLIP3-206ENST00000593074 PLXNA2O75051 1894 aa19.3■□□□□ 0.68
CLIP3-206ENST00000593074 AQP12BA6NM10 295 aa19.3■□□□□ 0.68
CLIP3-206ENST00000593074 ANKRD28O15084 1053 aa19.3■□□□□ 0.68
CLIP3-206ENST00000593074 NPPAP01160 153 aa19.3■□□□□ 0.68
CLIP3-206ENST00000593074 EBLN1P0CF75 366 aa19.3■□□□□ 0.68
CLIP3-206ENST00000593074 WEE1P30291 646 aa19.3■□□□□ 0.68
CLIP3-206ENST00000593074 VIPR1P32241 457 aa19.3■□□□□ 0.68
CLIP3-206ENST00000593074 PIK3CGP48736 1102 aa19.3■□□□□ 0.68
CLIP3-206ENST00000593074 CDKL1Q00532 357 aa19.3■□□□□ 0.68
CLIP3-206ENST00000593074 ARHGEF7Q14155 803 aa19.3■□□□□ 0.68
CLIP3-206ENST00000593074 TIGD2Q4W5G0 525 aa19.3■□□□□ 0.68
CLIP3-206ENST00000593074 LCN8Q6JVE9 175 aa19.3■□□□□ 0.68
CLIP3-206ENST00000593074 TTC23LQ6PF05 361 aa19.3■□□□□ 0.68
CLIP3-206ENST00000593074 MBOAT1Q6ZNC8 495 aa19.3■□□□□ 0.68
CLIP3-206ENST00000593074 AQP12AQ8IXF9 295 aa19.3■□□□□ 0.68
CLIP3-206ENST00000593074 GOLM1Q8NBJ4 401 aa19.3■□□□□ 0.68
CLIP3-206ENST00000593074 CYB5D2Q8WUJ1 264 aa19.3■□□□□ 0.68
CLIP3-206ENST00000593074 PPP3R2Q96LZ3 170 aa19.3■□□□□ 0.68
CLIP3-206ENST00000593074 LRRC3BQ96PB8 259 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms