RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 NXPE1Q8N323 547 aa11.7□□□□□ -0.54
DDX39A-219ENST00000592927 SNIP1Q8TAD8 396 aaKnown RBP11.7□□□□□ -0.54
DDX39A-219ENST00000592927 OR1E3Q8WZA6 343 aa11.7□□□□□ -0.54
DDX39A-219ENST00000592927 TSACCQ96A04 125 aaPredicted RBP11.7□□□□□ -0.54
DDX39A-219ENST00000592927 TSPAN17Q96FV3 270 aa11.7□□□□□ -0.54
DDX39A-219ENST00000592927 ELF4Q99607 663 aaPredicted RBP11.7□□□□□ -0.54
DDX39A-219ENST00000592927 SLC13A1Q9BZW2 595 aa11.7□□□□□ -0.54
DDX39A-219ENST00000592927 TRIM4Q9C037 500 aa11.7□□□□□ -0.54
DDX39A-219ENST00000592927 ZCCHC2Q9C0B9 1178 aaKnown RBP11.7□□□□□ -0.54
DDX39A-219ENST00000592927 TRIM39Q9HCM9 518 aa11.7□□□□□ -0.54
DDX39A-219ENST00000592927 FGF22Q9HCT0 170 aa11.7□□□□□ -0.54
DDX39A-219ENST00000592927 FBXO6Q9NRD1 293 aaPredicted RBP11.7□□□□□ -0.54
DDX39A-219ENST00000592927 INTS9Q9NV88 658 aaKnown RBP11.7□□□□□ -0.54
DDX39A-219ENST00000592927 TMPRSS11EQ9UL52 423 aa11.7□□□□□ -0.54
DDX39A-219ENST00000592927 SLC17A4Q9Y2C5 497 aa11.7□□□□□ -0.54
DDX39A-219ENST00000592927 MTO1Q9Y2Z2 717 aaKnown RBP11.7□□□□□ -0.54
DDX39A-219ENST00000592927 COMMD10Q9Y6G5 202 aa11.7□□□□□ -0.54
DDX39A-219ENST00000592927 OAS3Q9Y6K5 1087 aaKnown RBP11.7□□□□□ -0.54
DDX39A-219ENST00000592927 DOCK9Q9BZ29 2069 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 MGAQ8IWI9 3026 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 FAM95CA0A1B0GW59 222 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 PRSS38A1L453 326 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 AGAP14A8MT82 685 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 FOXO6A8MYZ6 492 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 H3BM21 787 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 TPP1O14773 563 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 YKT6O15498 198 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 VEGFDO43915 354 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 MTX2O75431 263 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 NDUFS3O75489 264 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 HAUS5O94927 633 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 RASGRP1O95267 797 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 TNFP01375 233 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 ALDOAP04075 364 aaKnown RBP11.69□□□□□ -0.54
DDX39A-219ENST00000592927 CSF2P04141 144 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 GSTA1P08263 222 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 RALBP11234 206 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 NME1P15531 152 aaKnown RBP11.69□□□□□ -0.54
DDX39A-219ENST00000592927 CHN1P15882 459 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 CREB1P16220 341 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 JUNDP17535 347 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 MSH3P20585 1137 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 CRABP2P29373 138 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 AKT1P31749 480 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 CRHR1P34998 444 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 CA5AP35218 305 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 RXRGP48443 463 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 CDKN1CP49918 316 aaPredicted RBP11.69□□□□□ -0.54
DDX39A-219ENST00000592927 ADARP55265 1226 aaKnown RBP11.69□□□□□ -0.54
DDX39A-219ENST00000592927 CLDN6P56747 220 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 HNRNPKP61978 463 aaKnown RBP eCLIP11.69□□□□□ -0.54
DDX39A-219ENST00000592927 TMEM115Q12893 351 aaPredicted RBP11.69□□□□□ -0.54
DDX39A-219ENST00000592927 GTF2H3Q13889 308 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 SEPT7Q16181 437 aaKnown RBP11.69□□□□□ -0.54
DDX39A-219ENST00000592927 ALG11Q2TAA5 492 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 ZNF648Q5T619 568 aaPredicted RBP11.69□□□□□ -0.54
DDX39A-219ENST00000592927 FAM45BPQ6NSW5 357 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 MICALCLQ6ZW33 695 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 SERPINA9Q86WD7 417 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 PIANPQ8IYJ0 282 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 PHACTR4Q8IZ21 702 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 DDHD1Q8NEL9 900 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 FAM45AQ8TCE6 357 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 HEXDCQ8WVB3 486 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 FGF11Q92914 225 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 DCUN1D1Q96GG9 259 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 COPS8Q99627 209 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 CAPS2Q9BXY5 557 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 IQCGQ9H095 443 aaKnown RBP11.69□□□□□ -0.54
DDX39A-219ENST00000592927 OR2AG1Q9H205 316 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 RMI1Q9H9A7 625 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 CARS2Q9HA77 564 aaKnown RBP11.69□□□□□ -0.54
DDX39A-219ENST00000592927 CYP4F12Q9HCS2 524 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 MRPL40Q9NQ50 206 aaKnown RBP11.69□□□□□ -0.54
DDX39A-219ENST00000592927 SNX15Q9NRS6 342 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 PSD3Q9NYI0 1048 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.69□□□□□ -0.54
DDX39A-219ENST00000592927 MARCH4Q9P2E8 410 aaPredicted RBP11.69□□□□□ -0.54
DDX39A-219ENST00000592927 ATXN10Q9UBB4 475 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 DCDC2Q9UHG0 476 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 PCDHGB2Q9Y5G2 931 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 DGKBQ9Y6T7 804 aa11.69□□□□□ -0.54
DDX39A-219ENST00000592927 COL5A1P20908 1838 aaPredicted RBP11.69□□□□□ -0.54
DDX39A-219ENST00000592927 TRBV5-4A0A0C4DH59 114 aa11.68□□□□□ -0.54
DDX39A-219ENST00000592927 A0A1B0GTQ1 180 aa11.68□□□□□ -0.54
DDX39A-219ENST00000592927 GPR89AB7ZAQ6 455 aa11.68□□□□□ -0.54
DDX39A-219ENST00000592927 CFAP99D6REC4 459 aa11.68□□□□□ -0.54
DDX39A-219ENST00000592927 GLRA3O75311 464 aa11.68□□□□□ -0.54
DDX39A-219ENST00000592927 SPAG7O75391 227 aa11.68□□□□□ -0.54
DDX39A-219ENST00000592927 CDK14O94921 469 aa11.68□□□□□ -0.54
DDX39A-219ENST00000592927 GPR89BP0CG08 455 aa11.68□□□□□ -0.54
DDX39A-219ENST00000592927 PRSS56P0CW18 603 aa11.68□□□□□ -0.54
DDX39A-219ENST00000592927 COL6A2P12110 1019 aa11.68□□□□□ -0.54
DDX39A-219ENST00000592927 CTSEP14091 401 aa11.68□□□□□ -0.54
DDX39A-219ENST00000592927 STMN1P16949 149 aa11.68□□□□□ -0.54
DDX39A-219ENST00000592927 ZNF8P17098 575 aaPredicted RBP11.68□□□□□ -0.54
DDX39A-219ENST00000592927 CD9P21926 228 aa11.68□□□□□ -0.54
DDX39A-219ENST00000592927 ACRV1P26436 265 aa11.68□□□□□ -0.54
DDX39A-219ENST00000592927 GNPDA1P46926 289 aa11.68□□□□□ -0.54
DDX39A-219ENST00000592927 CCT8P50990 548 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms