RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 GPR19Q15760 415 aa17.48■□□□□ 0.39
PRKCSH-211ENST00000590098 TCTN3Q6NUS6 607 aa17.48■□□□□ 0.39
PRKCSH-211ENST00000590098 FAM199XQ6PEV8 388 aaPredicted RBP17.48■□□□□ 0.39
PRKCSH-211ENST00000590098 SNX20Q7Z614 316 aa17.48■□□□□ 0.39
PRKCSH-211ENST00000590098 TMEM126BQ8IUX1 230 aa17.48■□□□□ 0.39
PRKCSH-211ENST00000590098 NXPE1Q8N323 547 aa17.48■□□□□ 0.39
PRKCSH-211ENST00000590098 OR4E2Q8NGC2 313 aa17.48■□□□□ 0.39
PRKCSH-211ENST00000590098 CCDC110Q8TBZ0 833 aa17.48■□□□□ 0.39
PRKCSH-211ENST00000590098 RMDN2Q96LZ7 410 aa17.48■□□□□ 0.39
PRKCSH-211ENST00000590098 FAM118BQ9BPY3 351 aa17.48■□□□□ 0.39
PRKCSH-211ENST00000590098 C19orf43Q9BQ61 176 aa17.48■□□□□ 0.39
PRKCSH-211ENST00000590098 FAM96AQ9H5X1 160 aa17.48■□□□□ 0.39
PRKCSH-211ENST00000590098 FANCEQ9HB96 536 aa17.48■□□□□ 0.39
PRKCSH-211ENST00000590098 KCND1Q9NSA2 647 aa17.48■□□□□ 0.39
PRKCSH-211ENST00000590098 PRRC2CQ9Y520 2896 aaKnown RBP17.48■□□□□ 0.39
PRKCSH-211ENST00000590098 RP1L1Q8IWN7 2480 aaPredicted RBP17.47■□□□□ 0.39
PRKCSH-211ENST00000590098 AGAP14A8MT82 685 aa17.47■□□□□ 0.39
PRKCSH-211ENST00000590098 K7EM74 188 aa17.47■□□□□ 0.39
PRKCSH-211ENST00000590098 SGTAO43765 313 aa17.47■□□□□ 0.39
PRKCSH-211ENST00000590098 PTMAP06454 111 aaKnown RBP17.47■□□□□ 0.39
PRKCSH-211ENST00000590098 POLR2CP19387 275 aaPredicted RBP17.47■□□□□ 0.39
PRKCSH-211ENST00000590098 NR1D1P20393 614 aa17.47■□□□□ 0.39
PRKCSH-211ENST00000590098 ARCN1P48444 511 aaKnown RBP17.47■□□□□ 0.39
PRKCSH-211ENST00000590098 PRLHRP49683 370 aa17.47■□□□□ 0.39
PRKCSH-211ENST00000590098 KPNA2P52292 529 aaKnown RBP17.47■□□□□ 0.39
PRKCSH-211ENST00000590098 ZNF140P52738 457 aaPredicted RBP17.47■□□□□ 0.39
PRKCSH-211ENST00000590098 CAPRIN2Q6IMN6 1127 aaKnown RBP17.47■□□□□ 0.39
PRKCSH-211ENST00000590098 ZNF449Q6P9G9 518 aa17.47■□□□□ 0.39
PRKCSH-211ENST00000590098 ASB18Q6ZVZ8 466 aa17.47■□□□□ 0.39
PRKCSH-211ENST00000590098 TMTC1Q8IUR5 882 aa17.47■□□□□ 0.39
PRKCSH-211ENST00000590098 ACVR1CQ8NER5 493 aa17.47■□□□□ 0.39
PRKCSH-211ENST00000590098 THAP4Q8WY91 577 aa17.47■□□□□ 0.39
PRKCSH-211ENST00000590098 MR1Q95460 341 aa17.47■□□□□ 0.39
PRKCSH-211ENST00000590098 PANX2Q96RD6 677 aa17.47■□□□□ 0.39
PRKCSH-211ENST00000590098 FERD3LQ96RJ6 166 aa17.47■□□□□ 0.39
PRKCSH-211ENST00000590098 SRMSQ9H3Y6 488 aa17.47■□□□□ 0.39
PRKCSH-211ENST00000590098 VPS37BQ9H9H4 285 aa17.47■□□□□ 0.39
PRKCSH-211ENST00000590098 AKIRIN1Q9H9L7 192 aaPredicted RBP17.47■□□□□ 0.39
PRKCSH-211ENST00000590098 TLK1Q9UKI8 766 aa17.47■□□□□ 0.39
PRKCSH-211ENST00000590098 SPTBP11277 2137 aa17.47■□□□□ 0.39
PRKCSH-211ENST00000590098 RELNP78509 3460 aa17.46■□□□□ 0.39
PRKCSH-211ENST00000590098 PIKFYVEQ9Y2I7 2098 aa17.46■□□□□ 0.39
PRKCSH-211ENST00000590098 C17orf113A0A1B0GUU1 675 aa17.46■□□□□ 0.39
PRKCSH-211ENST00000590098 MATN2O00339 956 aa17.46■□□□□ 0.39
PRKCSH-211ENST00000590098 IFRD1O00458 451 aaPredicted RBP17.46■□□□□ 0.39
PRKCSH-211ENST00000590098 MAP3K7O43318 606 aa17.46■□□□□ 0.39
PRKCSH-211ENST00000590098 KLK3P07288 261 aaPredicted RBP17.46■□□□□ 0.39
PRKCSH-211ENST00000590098 CDH3P22223 829 aa17.46■□□□□ 0.39
PRKCSH-211ENST00000590098 MSLNQ13421 630 aaPredicted RBP17.46■□□□□ 0.39
PRKCSH-211ENST00000590098 SPARCL1Q14515 664 aa17.46■□□□□ 0.39
PRKCSH-211ENST00000590098 GPR33Q49SQ1 333 aa17.46■□□□□ 0.39
PRKCSH-211ENST00000590098 DENND5AQ6IQ26 1287 aa17.46■□□□□ 0.39
PRKCSH-211ENST00000590098 SYVN1Q86TM6 617 aa17.46■□□□□ 0.39
PRKCSH-211ENST00000590098 APLFQ8IW19 511 aaPredicted RBP17.46■□□□□ 0.39
PRKCSH-211ENST00000590098 LILRA3Q8N6C8 439 aaPredicted RBP17.46■□□□□ 0.39
PRKCSH-211ENST00000590098 LCN9Q8WX39 176 aa17.46■□□□□ 0.39
PRKCSH-211ENST00000590098 ZNF501Q96CX3 271 aaPredicted RBP17.46■□□□□ 0.39
PRKCSH-211ENST00000590098 ARNT2Q9HBZ2 717 aa17.46■□□□□ 0.39
PRKCSH-211ENST00000590098 C1GALT1Q9NS00 363 aa17.46■□□□□ 0.39
PRKCSH-211ENST00000590098 ZDHHC3Q9NYG2 299 aa17.46■□□□□ 0.39
PRKCSH-211ENST00000590098 FARSAQ9Y285 508 aaKnown RBP17.46■□□□□ 0.39
PRKCSH-211ENST00000590098 BTRCQ9Y297 605 aa17.46■□□□□ 0.39
PRKCSH-211ENST00000590098 DUSP10Q9Y6W6 482 aa17.46■□□□□ 0.39
PRKCSH-211ENST00000590098 GSAPA4D1B5 854 aa17.45■□□□□ 0.38
PRKCSH-211ENST00000590098 RCCD1A6NED2 376 aa17.45■□□□□ 0.38
PRKCSH-211ENST00000590098 GOLGA6L9A6NEM1 432 aa17.45■□□□□ 0.38
PRKCSH-211ENST00000590098 SOWAHDA6NJG2 315 aa17.45■□□□□ 0.38
PRKCSH-211ENST00000590098 SLC9B1P1A6NJY1 282 aa17.45■□□□□ 0.38
PRKCSH-211ENST00000590098 BTNL10A8MVZ5 291 aa17.45■□□□□ 0.38
PRKCSH-211ENST00000590098 MC4RP32245 332 aa17.45■□□□□ 0.38
PRKCSH-211ENST00000590098 RPS18P62269 152 aaKnown RBP17.45■□□□□ 0.38
PRKCSH-211ENST00000590098 SEMA5AQ13591 1074 aa17.45■□□□□ 0.38
PRKCSH-211ENST00000590098 UBAP2LQ14157 1087 aaKnown RBP17.45■□□□□ 0.38
PRKCSH-211ENST00000590098 UGT8Q16880 541 aa17.45■□□□□ 0.38
PRKCSH-211ENST00000590098 ZRANB3Q5FWF4 1079 aa17.45■□□□□ 0.38
PRKCSH-211ENST00000590098 FBXO38Q6PIJ6 1188 aa17.45■□□□□ 0.38
PRKCSH-211ENST00000590098 ARHGEF18Q6ZSZ5 1173 aa17.45■□□□□ 0.38
PRKCSH-211ENST00000590098 TAS2R42Q7RTR8 314 aa17.45■□□□□ 0.38
PRKCSH-211ENST00000590098 RUFY1Q96T51 708 aa17.45■□□□□ 0.38
PRKCSH-211ENST00000590098 LATS2Q9NRM7 1088 aa17.45■□□□□ 0.38
PRKCSH-211ENST00000590098 POMT2Q9UKY4 750 aa17.45■□□□□ 0.38
PRKCSH-211ENST00000590098 CCL22O00626 93 aa17.44■□□□□ 0.38
PRKCSH-211ENST00000590098 LDB2O43679 373 aa17.44■□□□□ 0.38
PRKCSH-211ENST00000590098 GSDMDP57764 484 aa17.44■□□□□ 0.38
PRKCSH-211ENST00000590098 SRSF1Q07955 248 aaKnown RBP eCLIP17.44■□□□□ 0.38
PRKCSH-211ENST00000590098 PARP6Q2NL67 630 aa17.44■□□□□ 0.38
PRKCSH-211ENST00000590098 AADACL2Q6P093 401 aa17.44■□□□□ 0.38
PRKCSH-211ENST00000590098 SERPINA9Q86WD7 417 aa17.44■□□□□ 0.38
PRKCSH-211ENST00000590098 TTC13Q8NBP0 860 aa17.44■□□□□ 0.38
PRKCSH-211ENST00000590098 CPT1BQ92523 772 aa17.44■□□□□ 0.38
PRKCSH-211ENST00000590098 ALG3Q92685 438 aa17.44■□□□□ 0.38
PRKCSH-211ENST00000590098 CLIP3Q96DZ5 547 aa17.44■□□□□ 0.38
PRKCSH-211ENST00000590098 DNAJC1Q96KC8 554 aaKnown RBP17.44■□□□□ 0.38
PRKCSH-211ENST00000590098 PPM1MQ96MI6 270 aa17.44■□□□□ 0.38
PRKCSH-211ENST00000590098 ALS2CR12Q96Q35 445 aa17.44■□□□□ 0.38
PRKCSH-211ENST00000590098 TLR10Q9BXR5 811 aa17.44■□□□□ 0.38
PRKCSH-211ENST00000590098 COG4Q9H9E3 785 aa17.44■□□□□ 0.38
PRKCSH-211ENST00000590098 SYTL2Q9HCH5 934 aa17.44■□□□□ 0.38
PRKCSH-211ENST00000590098 PLAAQ9Y263 795 aa17.44■□□□□ 0.38
PRKCSH-211ENST00000590098 SEC16AO15027 2179 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms