RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 OXR1Q8N573 874 aa25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 SLC17A4Q9Y2C5 497 aa25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 ARL2BPQ9Y2Y0 163 aa25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 RAP2CQ9Y3L5 183 aa25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 MGAT4DA6NG13 374 aa25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 STK25O00506 426 aa25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 SNX2O60749 519 aa25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 SUPT7LO94864 414 aa25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 APBB3O95704 486 aa25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 CEACAM5P06731 702 aa25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 MPSTP25325 297 aa25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 EEF1DP29692 281 aaKnown RBP25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 PDHA2P29803 388 aa25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 CD6P30203 668 aa25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 AGTR2P50052 363 aa25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 CLDN2P57739 230 aa25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 GALNT1Q10472 559 aaPredicted RBP25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 FBXO48Q5FWF7 155 aa25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 UBE2R2Q712K3 238 aaPredicted RBP25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 CFAP206Q8IYR0 622 aa25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 FRMD1Q8N878 549 aa25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 HM13Q8TCT9 377 aa25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 SKA2Q8WVK7 121 aaPredicted RBP25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 TRMOQ9BU70 441 aa25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 ILKAPQ9H0C8 392 aaPredicted RBP25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 DCTN4Q9UJW0 460 aa25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 PDE10AQ9Y233 779 aa25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 CA5BQ9Y2D0 317 aa25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 SIT1Q9Y3P8 196 aa25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 IGHV1OR15-9A0A0B4J2B8 117 aa25.48■■□□□ 1.67
SCAMP4-210ENST00000588555 SLC16A5O15375 505 aa25.48■■□□□ 1.67
SCAMP4-210ENST00000588555 GRID2O43424 1007 aa25.48■■□□□ 1.67
SCAMP4-210ENST00000588555 SNUPNO95149 360 aaKnown RBP25.48■■□□□ 1.67
SCAMP4-210ENST00000588555 ENO2P09104 434 aaPredicted RBP25.48■■□□□ 1.67
SCAMP4-210ENST00000588555 VCLP18206 1134 aa25.48■■□□□ 1.67
SCAMP4-210ENST00000588555 PRKAA1Q13131 559 aa25.48■■□□□ 1.67
SCAMP4-210ENST00000588555 PLA2G4EQ3MJ16 856 aa25.48■■□□□ 1.67
SCAMP4-210ENST00000588555 KIAA0895LQ68EN5 471 aa25.48■■□□□ 1.67
SCAMP4-210ENST00000588555 BMFQ96LC9 184 aa25.48■■□□□ 1.67
SCAMP4-210ENST00000588555 PARVBQ9HBI1 364 aa25.48■■□□□ 1.67
SCAMP4-210ENST00000588555 SLC23A2Q9UGH3 650 aa25.48■■□□□ 1.67
SCAMP4-210ENST00000588555 ASB1Q9Y576 335 aa25.48■■□□□ 1.67
SCAMP4-210ENST00000588555 DNMT3AQ9Y6K1 912 aaPredicted RBP25.48■■□□□ 1.67
SCAMP4-210ENST00000588555 H0Y8X5 98 aa25.47■■□□□ 1.67
SCAMP4-210ENST00000588555 FPGTO14772 594 aa25.47■■□□□ 1.67
SCAMP4-210ENST00000588555 ZXDAP98168 799 aa25.47■■□□□ 1.67
SCAMP4-210ENST00000588555 ZSCAN26Q16670 478 aa25.47■■□□□ 1.67
SCAMP4-210ENST00000588555 FAM83HQ6ZRV2 1179 aaPredicted RBP25.47■■□□□ 1.67
SCAMP4-210ENST00000588555 ANKS4BQ8N8V4 417 aa25.47■■□□□ 1.67
SCAMP4-210ENST00000588555 TMEM145Q8NBT3 493 aa25.47■■□□□ 1.67
SCAMP4-210ENST00000588555 RLN3Q8WXF3 142 aa25.47■■□□□ 1.67
SCAMP4-210ENST00000588555 TM7SF3Q9NS93 570 aa25.47■■□□□ 1.67
SCAMP4-210ENST00000588555 ZDHHC2Q9UIJ5 367 aa25.47■■□□□ 1.67
SCAMP4-210ENST00000588555 PTBP2Q9UKA9 531 aaKnown RBP25.47■■□□□ 1.67
SCAMP4-210ENST00000588555 MUC3AQ02505 3323 aa25.47■■□□□ 1.67
SCAMP4-210ENST00000588555 CACNB4O00305 520 aaPredicted RBP25.46■■□□□ 1.67
SCAMP4-210ENST00000588555 PSIP1O75475 530 aaKnown RBP25.46■■□□□ 1.67
SCAMP4-210ENST00000588555 GUCA1CO95843 209 aa25.46■■□□□ 1.67
SCAMP4-210ENST00000588555 DCNP07585 359 aaKnown RBP25.46■■□□□ 1.67
SCAMP4-210ENST00000588555 KIAA1024LP59773 190 aa25.46■■□□□ 1.67
SCAMP4-210ENST00000588555 PFN3P60673 137 aa25.46■■□□□ 1.67
SCAMP4-210ENST00000588555 NFE2L1Q14494 772 aa25.46■■□□□ 1.67
SCAMP4-210ENST00000588555 GCNT7Q6ZNI0 430 aa25.46■■□□□ 1.67
SCAMP4-210ENST00000588555 AMZ2Q86W34 360 aa25.46■■□□□ 1.67
SCAMP4-210ENST00000588555 FAM160A2Q8N612 972 aaPredicted RBP25.46■■□□□ 1.67
SCAMP4-210ENST00000588555 RHBDF1Q96CC6 855 aa25.46■■□□□ 1.67
SCAMP4-210ENST00000588555 SCARF2Q96GP6 870 aaPredicted RBP25.46■■□□□ 1.67
SCAMP4-210ENST00000588555 NSUN5Q96P11 429 aaKnown RBP25.46■■□□□ 1.67
SCAMP4-210ENST00000588555 GPR174Q9BXC1 333 aa25.46■■□□□ 1.67
SCAMP4-210ENST00000588555 SHCBP1LQ9BZQ2 653 aa25.46■■□□□ 1.67
SCAMP4-210ENST00000588555 PCTPQ9UKL6 214 aa25.46■■□□□ 1.67
SCAMP4-210ENST00000588555 EPB41L3Q9Y2J2 1087 aaPredicted RBP25.46■■□□□ 1.67
SCAMP4-210ENST00000588555 A0A0G2JND7 137 aa25.46■■□□□ 1.67
SCAMP4-210ENST00000588555 H3BM21 787 aa25.46■■□□□ 1.67
SCAMP4-210ENST00000588555 UBFD1O14562 309 aaKnown RBP25.46■■□□□ 1.67
SCAMP4-210ENST00000588555 ZNF195O14628 629 aa25.46■■□□□ 1.67
SCAMP4-210ENST00000588555 KMOO15229 486 aa25.46■■□□□ 1.67
SCAMP4-210ENST00000588555 TAPBPO15533 448 aa25.46■■□□□ 1.67
SCAMP4-210ENST00000588555 ALOX15P16050 662 aaPredicted RBP25.46■■□□□ 1.67
SCAMP4-210ENST00000588555 PXNP49023 591 aaPredicted RBP25.46■■□□□ 1.67
SCAMP4-210ENST00000588555 RPIAP49247 311 aa25.46■■□□□ 1.67
SCAMP4-210ENST00000588555 CDKL1Q00532 357 aa25.46■■□□□ 1.67
SCAMP4-210ENST00000588555 PLOD1Q02809 727 aaPredicted RBP25.46■■□□□ 1.67
SCAMP4-210ENST00000588555 CDKL4Q5MAI5 379 aa25.46■■□□□ 1.67
SCAMP4-210ENST00000588555 MAVSQ7Z434 540 aa25.46■■□□□ 1.67
SCAMP4-210ENST00000588555 ZNF483Q8TF39 744 aaPredicted RBP25.46■■□□□ 1.67
SCAMP4-210ENST00000588555 ESAMQ96AP7 390 aa25.46■■□□□ 1.67
SCAMP4-210ENST00000588555 DPEP2Q9H4A9 486 aa25.46■■□□□ 1.67
SCAMP4-210ENST00000588555 RMI1Q9H9A7 625 aa25.46■■□□□ 1.67
SCAMP4-210ENST00000588555 S100BP04271 92 aaPredicted RBP25.45■■□□□ 1.66
SCAMP4-210ENST00000588555 AKT2P31751 481 aa25.45■■□□□ 1.66
SCAMP4-210ENST00000588555 RPL14P50914 215 aaKnown RBP25.45■■□□□ 1.66
SCAMP4-210ENST00000588555 CDH13P55290 713 aa25.45■■□□□ 1.66
SCAMP4-210ENST00000588555 ABRQ12979 859 aa25.45■■□□□ 1.66
SCAMP4-210ENST00000588555 PCBP2Q15366 365 aaKnown RBP eCLIP25.45■■□□□ 1.66
SCAMP4-210ENST00000588555 C18orf21Q32NC0 220 aaPredicted RBP25.45■■□□□ 1.66
SCAMP4-210ENST00000588555 ANKS6Q68DC2 871 aa25.45■■□□□ 1.66
SCAMP4-210ENST00000588555 C6orf89Q6UWU4 347 aa25.45■■□□□ 1.66
SCAMP4-210ENST00000588555 MBOAT1Q6ZNC8 495 aa25.45■■□□□ 1.66
SCAMP4-210ENST00000588555 WDR75Q8IWA0 830 aaKnown RBP25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms