RNA–Protein interactions for RNA: ENST00000588552.5

PTPRS-206, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

TSL 1 (best)

Gene PTPRS, Length 5,443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-206ENST00000588552 ITPKBP27987 946 aa15.27■□□□□ 0.04
PTPRS-206ENST00000588552 GPX6P59796 221 aa15.27■□□□□ 0.04
PTPRS-206ENST00000588552 LIPEQ05469 1076 aa15.27■□□□□ 0.04
PTPRS-206ENST00000588552 PRKD1Q15139 912 aaPredicted RBP15.27■□□□□ 0.04
PTPRS-206ENST00000588552 RFX4Q33E94 735 aa15.27■□□□□ 0.04
PTPRS-206ENST00000588552 TTC29Q8NA56 475 aaPredicted RBP15.27■□□□□ 0.04
PTPRS-206ENST00000588552 TEX47Q8TBZ9 253 aa15.27■□□□□ 0.04
PTPRS-206ENST00000588552 FLRT1Q9NZU1 646 aa15.27■□□□□ 0.04
PTPRS-206ENST00000588552 KCTD3Q9Y597 815 aa15.27■□□□□ 0.04
PTPRS-206ENST00000588552 ERN1O75460 977 aaKnown RBP15.27■□□□□ 0.03
PTPRS-206ENST00000588552 UGT2B17O75795 530 aa15.27■□□□□ 0.03
PTPRS-206ENST00000588552 ADSLP30566 484 aaPredicted RBP15.27■□□□□ 0.03
PTPRS-206ENST00000588552 CSNK2BP67870 215 aa15.27■□□□□ 0.03
PTPRS-206ENST00000588552 HEPACAMQ14CZ8 416 aa15.27■□□□□ 0.03
PTPRS-206ENST00000588552 FAM43BQ6ZT52 329 aaPredicted RBP15.27■□□□□ 0.03
PTPRS-206ENST00000588552 IRF7Q92985 503 aa15.27■□□□□ 0.03
PTPRS-206ENST00000588552 CNOT6Q9ULM6 557 aaKnown RBP15.27■□□□□ 0.03
PTPRS-206ENST00000588552 FAM72CH0Y354 149 aa15.27■□□□□ 0.03
PTPRS-206ENST00000588552 PTGESO14684 152 aa15.27■□□□□ 0.03
PTPRS-206ENST00000588552 SCN2BO60939 215 aa15.27■□□□□ 0.03
PTPRS-206ENST00000588552 ZNF37AP17032 561 aaPredicted RBP15.27■□□□□ 0.03
PTPRS-206ENST00000588552 HSD17B2P37059 387 aa15.27■□□□□ 0.03
PTPRS-206ENST00000588552 GHRHRQ02643 423 aa15.27■□□□□ 0.03
PTPRS-206ENST00000588552 RING1Q06587 406 aa15.27■□□□□ 0.03
PTPRS-206ENST00000588552 FAM72AQ5TYM5 149 aa15.27■□□□□ 0.03
PTPRS-206ENST00000588552 FAM72DQ6L9T8 149 aa15.27■□□□□ 0.03
PTPRS-206ENST00000588552 GALNT18Q6P9A2 607 aa15.27■□□□□ 0.03
PTPRS-206ENST00000588552 ZC3HC1Q86WB0 502 aaKnown RBP15.27■□□□□ 0.03
PTPRS-206ENST00000588552 FAM72BQ86X60 149 aa15.27■□□□□ 0.03
PTPRS-206ENST00000588552 ZNF540Q8NDQ6 660 aa15.27■□□□□ 0.03
PTPRS-206ENST00000588552 C19orf18Q8NEA5 215 aa15.27■□□□□ 0.03
PTPRS-206ENST00000588552 METTL21AQ8WXB1 218 aa15.27■□□□□ 0.03
PTPRS-206ENST00000588552 TRPS1Q9UHF7 1281 aa15.27■□□□□ 0.03
PTPRS-206ENST00000588552 CYTH4Q9UIA0 394 aa15.27■□□□□ 0.03
PTPRS-206ENST00000588552 RUVBL1Q9Y265 456 aaKnown RBP15.27■□□□□ 0.03
PTPRS-206ENST00000588552 SMIM31A0A1B0GVY4 71 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 MMP20O60882 483 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 SHOX2O60902 331 aaPredicted RBP15.26■□□□□ 0.03
PTPRS-206ENST00000588552 ECI2O75521 394 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 PCSK2P16519 638 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 ZNF155Q12901 538 aaPredicted RBP15.26■□□□□ 0.03
PTPRS-206ENST00000588552 MINDY4Q4G0A6 757 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 FBXO46Q6PJ61 603 aaPredicted RBP15.26■□□□□ 0.03
PTPRS-206ENST00000588552 OR2T34Q8NGX1 318 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 OR2T3Q8NH03 318 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 MTERF1Q99551 399 aaKnown RBP15.26■□□□□ 0.03
PTPRS-206ENST00000588552 STRA6Q9BX79 667 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 OSBPL11Q9BXB4 747 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 DZANK1Q9NVP4 752 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 U3KQV3 271 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 PLA2G16P53816 162 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 PITX1P78337 314 aaPredicted RBP15.26■□□□□ 0.03
PTPRS-206ENST00000588552 MTX3Q5HYI7 312 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 ANKRD46Q86W74 232 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 FAM13CQ8NE31 585 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 MYDGFQ969H8 173 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 MEIS3P2A8K0S8 358 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 HNMTP50135 292 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 RTP2Q5QGT7 225 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 LRRTM4Q86VH4 590 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 PQLC1Q8N2U9 271 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 ZNF563Q8TA94 476 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 PYCR2Q96C36 320 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 MUC13Q9H3R2 512 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 EFCAB10A6NFE3 127 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 ALPPL2P10696 532 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 TPP2P29144 1249 aaPredicted RBP15.26■□□□□ 0.03
PTPRS-206ENST00000588552 RPS14P62263 151 aaKnown RBP15.26■□□□□ 0.03
PTPRS-206ENST00000588552 HSPB3Q12988 150 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 TIMM50Q3ZCQ8 353 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 EOGTQ5NDL2 527 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 BROXQ5VW32 411 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 NEK10Q6ZWH5 1172 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 ZNF248Q8NDW4 579 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 LPGAT1Q92604 370 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 OTUB2Q96DC9 234 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 LRRC14BA6NHZ5 514 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 KERAO60938 352 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 TSPAN14Q8NG11 270 aa15.26■□□□□ 0.03
PTPRS-206ENST00000588552 MYH3P11055 1940 aa15.25■□□□□ 0.03
PTPRS-206ENST00000588552 HAS3O00219 553 aa15.25■□□□□ 0.03
PTPRS-206ENST00000588552 HOXB2P14652 356 aa15.25■□□□□ 0.03
PTPRS-206ENST00000588552 RPL26P61254 145 aaKnown RBP15.25■□□□□ 0.03
PTPRS-206ENST00000588552 DGUOKQ16854 277 aa15.25■□□□□ 0.03
PTPRS-206ENST00000588552 CDK15Q96Q40 435 aa15.25■□□□□ 0.03
PTPRS-206ENST00000588552 ALG2Q9H553 416 aa15.25■□□□□ 0.03
PTPRS-206ENST00000588552 HLA-EP13747 358 aa15.25■□□□□ 0.03
PTPRS-206ENST00000588552 GNSP15586 552 aa15.25■□□□□ 0.03
PTPRS-206ENST00000588552 FOXN2P32314 431 aa15.25■□□□□ 0.03
PTPRS-206ENST00000588552 TRAF3Q13114 568 aa15.25■□□□□ 0.03
PTPRS-206ENST00000588552 PIM3Q86V86 326 aa15.25■□□□□ 0.03
PTPRS-206ENST00000588552 KBTBD7Q8WVZ9 684 aa15.25■□□□□ 0.03
PTPRS-206ENST00000588552 USP29Q9HBJ7 922 aa15.25■□□□□ 0.03
PTPRS-206ENST00000588552 S100A14Q9HCY8 104 aa15.25■□□□□ 0.03
PTPRS-206ENST00000588552 ITM2CQ9NQX7 267 aa15.25■□□□□ 0.03
PTPRS-206ENST00000588552 MBLAC1A4D2B0 266 aaPredicted RBP15.25■□□□□ 0.03
PTPRS-206ENST00000588552 SIX3O95343 332 aaPredicted RBP15.25■□□□□ 0.03
PTPRS-206ENST00000588552 ITGA1P56199 1179 aa15.25■□□□□ 0.03
PTPRS-206ENST00000588552 WDR4P57081 412 aaKnown RBP15.25■□□□□ 0.03
PTPRS-206ENST00000588552 NFKB2Q00653 900 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms