RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 TCTN3Q6NUS6 607 aa16.5■□□□□ 0.23
TMED1-203ENST00000588259 RANBP10Q6VN20 620 aa16.5■□□□□ 0.23
TMED1-203ENST00000588259 NXPE1Q8N323 547 aa16.5■□□□□ 0.23
TMED1-203ENST00000588259 D2HGDHQ8N465 521 aa16.5■□□□□ 0.23
TMED1-203ENST00000588259 LILRA3Q8N6C8 439 aaPredicted RBP16.5■□□□□ 0.23
TMED1-203ENST00000588259 HM13Q8TCT9 377 aa16.5■□□□□ 0.23
TMED1-203ENST00000588259 LCN9Q8WX39 176 aa16.5■□□□□ 0.23
TMED1-203ENST00000588259 SEC14L1Q92503 715 aa16.5■□□□□ 0.23
TMED1-203ENST00000588259 PPM1MQ96MI6 270 aa16.5■□□□□ 0.23
TMED1-203ENST00000588259 SPATA13Q96N96 652 aa16.5■□□□□ 0.23
TMED1-203ENST00000588259 FERD3LQ96RJ6 166 aa16.5■□□□□ 0.23
TMED1-203ENST00000588259 COPS8Q99627 209 aa16.5■□□□□ 0.23
TMED1-203ENST00000588259 TBL1YQ9BQ87 522 aa16.5■□□□□ 0.23
TMED1-203ENST00000588259 SRMSQ9H3Y6 488 aa16.5■□□□□ 0.23
TMED1-203ENST00000588259 AKIRIN1Q9H9L7 192 aaPredicted RBP16.5■□□□□ 0.23
TMED1-203ENST00000588259 PIKFYVEQ9Y2I7 2098 aa16.5■□□□□ 0.23
TMED1-203ENST00000588259 CCDC66A2RUB6 948 aa16.49■□□□□ 0.23
TMED1-203ENST00000588259 LCA5LO95447 670 aa16.49■□□□□ 0.23
TMED1-203ENST00000588259 ADRA1AP35348 466 aa16.49■□□□□ 0.23
TMED1-203ENST00000588259 PRLHRP49683 370 aa16.49■□□□□ 0.23
TMED1-203ENST00000588259 ZNF140P52738 457 aaPredicted RBP16.49■□□□□ 0.23
TMED1-203ENST00000588259 CHAF1BQ13112 559 aa16.49■□□□□ 0.23
TMED1-203ENST00000588259 ZRANB3Q5FWF4 1079 aa16.49■□□□□ 0.23
TMED1-203ENST00000588259 ATCAYQ86WG3 371 aa16.49■□□□□ 0.23
TMED1-203ENST00000588259 ZFPM2Q8WW38 1151 aa16.49■□□□□ 0.23
TMED1-203ENST00000588259 PPP1R2P1Q96PQ5 205 aa16.49■□□□□ 0.23
TMED1-203ENST00000588259 CCM2Q9BSQ5 444 aa16.49■□□□□ 0.23
TMED1-203ENST00000588259 GPR87Q9BY21 358 aa16.49■□□□□ 0.23
TMED1-203ENST00000588259 VPS37BQ9H9H4 285 aa16.49■□□□□ 0.23
TMED1-203ENST00000588259 KCND1Q9NSA2 647 aa16.49■□□□□ 0.23
TMED1-203ENST00000588259 PCDHA3Q9Y5H8 950 aa16.49■□□□□ 0.23
TMED1-203ENST00000588259 SLC9B1P1A6NJY1 282 aa16.48■□□□□ 0.23
TMED1-203ENST00000588259 IFRD1O00458 451 aaPredicted RBP16.48■□□□□ 0.23
TMED1-203ENST00000588259 MAP3K7O43318 606 aa16.48■□□□□ 0.23
TMED1-203ENST00000588259 TJP3O95049 919 aa16.48■□□□□ 0.23
TMED1-203ENST00000588259 KLK3P07288 261 aaPredicted RBP16.48■□□□□ 0.23
TMED1-203ENST00000588259 ATP1B2P14415 290 aaPredicted RBP16.48■□□□□ 0.23
TMED1-203ENST00000588259 MC4RP32245 332 aa16.48■□□□□ 0.23
TMED1-203ENST00000588259 HADHAP40939 763 aa16.48■□□□□ 0.23
TMED1-203ENST00000588259 PGDP52209 483 aa16.48■□□□□ 0.23
TMED1-203ENST00000588259 MLLT10P55197 1068 aa16.48■□□□□ 0.23
TMED1-203ENST00000588259 RWDD2BP57060 319 aa16.48■□□□□ 0.23
TMED1-203ENST00000588259 XIAPP98170 497 aa16.48■□□□□ 0.23
TMED1-203ENST00000588259 GPS2Q13227 327 aa16.48■□□□□ 0.23
TMED1-203ENST00000588259 UBAP2LQ14157 1087 aaKnown RBP16.48■□□□□ 0.23
TMED1-203ENST00000588259 UGT8Q16880 541 aa16.48■□□□□ 0.23
TMED1-203ENST00000588259 CPZQ66K79 652 aa16.48■□□□□ 0.23
TMED1-203ENST00000588259 ZNF449Q6P9G9 518 aa16.48■□□□□ 0.23
TMED1-203ENST00000588259 ARHGEF18Q6ZSZ5 1173 aa16.48■□□□□ 0.23
TMED1-203ENST00000588259 TAS2R42Q7RTR8 314 aa16.48■□□□□ 0.23
TMED1-203ENST00000588259 SNX20Q7Z614 316 aa16.48■□□□□ 0.23
TMED1-203ENST00000588259 SYVN1Q86TM6 617 aa16.48■□□□□ 0.23
TMED1-203ENST00000588259 ACVR1CQ8NER5 493 aa16.48■□□□□ 0.23
TMED1-203ENST00000588259 OR8K5Q8NH50 307 aa16.48■□□□□ 0.23
TMED1-203ENST00000588259 CLIP3Q96DZ5 547 aa16.48■□□□□ 0.23
TMED1-203ENST00000588259 TRIM55Q9BYV6 548 aa16.48■□□□□ 0.23
TMED1-203ENST00000588259 SLC7A5P2Q9GIP4 190 aa16.48■□□□□ 0.23
TMED1-203ENST00000588259 CHST8Q9H2A9 424 aa16.48■□□□□ 0.23
TMED1-203ENST00000588259 ACSS2Q9NR19 701 aa16.48■□□□□ 0.23
TMED1-203ENST00000588259 ANKMY1Q9P2S6 941 aa16.48■□□□□ 0.23
TMED1-203ENST00000588259 POMT2Q9UKY4 750 aa16.48■□□□□ 0.23
TMED1-203ENST00000588259 MED13Q9UHV7 2174 aa16.47■□□□□ 0.23
TMED1-203ENST00000588259 SOWAHDA6NJG2 315 aa16.47■□□□□ 0.23
TMED1-203ENST00000588259 ARGFXA6NJG6 315 aa16.47■□□□□ 0.23
TMED1-203ENST00000588259 TMEM150CB9EJG8 249 aa16.47■□□□□ 0.23
TMED1-203ENST00000588259 SGTAO43765 313 aa16.47■□□□□ 0.23
TMED1-203ENST00000588259 CYP2A7P20853 494 aa16.47■□□□□ 0.23
TMED1-203ENST00000588259 PREPP48147 710 aa16.47■□□□□ 0.23
TMED1-203ENST00000588259 SEMA5AQ13591 1074 aa16.47■□□□□ 0.23
TMED1-203ENST00000588259 IL10RAQ13651 578 aa16.47■□□□□ 0.23
TMED1-203ENST00000588259 PRAMEF17Q5VTA0 474 aa16.47■□□□□ 0.23
TMED1-203ENST00000588259 CAPRIN2Q6IMN6 1127 aaKnown RBP16.47■□□□□ 0.23
TMED1-203ENST00000588259 AADACL2Q6P093 401 aa16.47■□□□□ 0.23
TMED1-203ENST00000588259 SARM1Q6SZW1 724 aa16.47■□□□□ 0.23
TMED1-203ENST00000588259 CARFQ8N187 725 aa16.47■□□□□ 0.23
TMED1-203ENST00000588259 HEXDCQ8WVB3 486 aa16.47■□□□□ 0.23
TMED1-203ENST00000588259 THAP4Q8WY91 577 aa16.47■□□□□ 0.23
TMED1-203ENST00000588259 CPT1BQ92523 772 aa16.47■□□□□ 0.23
TMED1-203ENST00000588259 ZNF501Q96CX3 271 aaPredicted RBP16.47■□□□□ 0.23
TMED1-203ENST00000588259 DNAJC1Q96KC8 554 aaKnown RBP16.47■□□□□ 0.23
TMED1-203ENST00000588259 LINC00615Q96LM1 132 aaPredicted RBP16.47■□□□□ 0.23
TMED1-203ENST00000588259 HGH1Q9BTY7 390 aa16.47■□□□□ 0.23
TMED1-203ENST00000588259 SLC25A23Q9BV35 468 aa16.47■□□□□ 0.23
TMED1-203ENST00000588259 KLHL25Q9H0H3 589 aa16.47■□□□□ 0.23
TMED1-203ENST00000588259 COG4Q9H9E3 785 aa16.47■□□□□ 0.23
TMED1-203ENST00000588259 SNX7Q9UNH6 387 aa16.47■□□□□ 0.23
TMED1-203ENST00000588259 FARSAQ9Y285 508 aaKnown RBP16.47■□□□□ 0.23
TMED1-203ENST00000588259 BTRCQ9Y297 605 aa16.47■□□□□ 0.23
TMED1-203ENST00000588259 EFR3BQ9Y2G0 817 aa16.47■□□□□ 0.23
TMED1-203ENST00000588259 RCCD1A6NED2 376 aa16.46■□□□□ 0.23
TMED1-203ENST00000588259 MATN2O00339 956 aa16.46■□□□□ 0.23
TMED1-203ENST00000588259 RECKO95980 971 aa16.46■□□□□ 0.23
TMED1-203ENST00000588259 ATXN8OSP0DMR3 200 aa16.46■□□□□ 0.23
TMED1-203ENST00000588259 PTPN7P35236 360 aa16.46■□□□□ 0.23
TMED1-203ENST00000588259 CCL11P51671 97 aa16.46■□□□□ 0.23
TMED1-203ENST00000588259 GSDMDP57764 484 aa16.46■□□□□ 0.23
TMED1-203ENST00000588259 MICALCLQ6ZW33 695 aa16.46■□□□□ 0.23
TMED1-203ENST00000588259 HOOK3Q86VS8 718 aa16.46■□□□□ 0.23
TMED1-203ENST00000588259 APLFQ8IW19 511 aaPredicted RBP16.46■□□□□ 0.23
TMED1-203ENST00000588259 TAB3Q8N5C8 712 aaPredicted RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms