RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 MAP9Q49MG5 647 aa10.47□□□□□ -0.73
SMARCA4-213ENST00000587988 SYTL3Q4VX76 610 aa10.47□□□□□ -0.73
SMARCA4-213ENST00000587988 PLEKHS1Q5SXH7 462 aa10.47□□□□□ -0.73
SMARCA4-213ENST00000587988 MROH9Q5TGP6 573 aa10.47□□□□□ -0.73
SMARCA4-213ENST00000587988 AGAP9Q5VTM2 703 aa10.47□□□□□ -0.73
SMARCA4-213ENST00000587988 DUS1LQ6P1R4 473 aaKnown RBP10.47□□□□□ -0.73
SMARCA4-213ENST00000587988 PAQR3Q6TCH7 311 aa10.47□□□□□ -0.73
SMARCA4-213ENST00000587988 TMEM207Q6UWW9 146 aa10.47□□□□□ -0.73
SMARCA4-213ENST00000587988 PIP4P1Q86T03 277 aa10.47□□□□□ -0.73
SMARCA4-213ENST00000587988 SLC22A15Q8IZD6 547 aa10.47□□□□□ -0.73
SMARCA4-213ENST00000587988 SFRP1Q8N474 314 aa10.47□□□□□ -0.73
SMARCA4-213ENST00000587988 ARL14Q8N4G2 192 aa10.47□□□□□ -0.73
SMARCA4-213ENST00000587988 MREGQ8N565 214 aa10.47□□□□□ -0.73
SMARCA4-213ENST00000587988 ARL10Q8N8L6 244 aa10.47□□□□□ -0.73
SMARCA4-213ENST00000587988 BAHD1Q8TBE0 780 aaPredicted RBP10.47□□□□□ -0.73
SMARCA4-213ENST00000587988 SLC37A2Q8TED4 501 aa10.47□□□□□ -0.73
SMARCA4-213ENST00000587988 INPP5DQ92835 1189 aa10.47□□□□□ -0.73
SMARCA4-213ENST00000587988 DHRS4Q9BTZ2 278 aa10.47□□□□□ -0.73
SMARCA4-213ENST00000587988 TAS2R13Q9NYV9 303 aa10.47□□□□□ -0.73
SMARCA4-213ENST00000587988 TRMT6Q9UJA5 497 aaKnown RBP10.47□□□□□ -0.73
SMARCA4-213ENST00000587988 SLC39A10Q9ULF5 831 aa10.47□□□□□ -0.73
SMARCA4-213ENST00000587988 CCDC151A5D8V7 595 aa10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 KPNA5O15131 536 aa10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 CASC3O15234 703 aaKnown RBP10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 PPM1DO15297 605 aa10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 PHGDHO43175 533 aaKnown RBP10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 WISP3O95389 354 aaPredicted RBP10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 LDOC1O95751 146 aaPredicted RBP10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 SLC35G4P0C7Q5 338 aa10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 XRCC1P18887 633 aaPredicted RBP10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 UBE2IP63279 158 aaKnown RBP10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 POU4F1Q01851 419 aa10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 ABRQ12979 859 aa10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 DNAJC3Q13217 504 aa10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 PDAP1Q13442 181 aaKnown RBP10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 USP10Q14694 798 aaKnown RBP10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 TMED2Q15363 201 aa10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 NR0B2Q15466 257 aa10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 INAVAQ3KP66 663 aa10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 C14orf28Q4W4Y0 310 aa10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 BEND6Q5SZJ8 279 aaPredicted RBP10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 UGT3A1Q6NUS8 523 aa10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 ADGRD1Q6QNK2 874 aa10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 CYHR1Q6ZMK1 362 aa10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 CMC1Q7Z7K0 106 aa10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 PDZD3Q86UT5 571 aa10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 CPNE9Q8IYJ1 553 aa10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 PHC3Q8NDX5 983 aa10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 DEFB124Q8NES8 71 aa10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 MAPK15Q8TD08 544 aa10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 EEF1AKMT1Q8WVE0 214 aa10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 GLMNQ92990 594 aa10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 CNDP2Q96KP4 475 aaKnown RBP10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 C12orf66Q96MD2 445 aa10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 KLHL42Q9P2K6 505 aa10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 CPNE7Q9UBL6 633 aa10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 CTNNAL1Q9UBT7 734 aa10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 ZNF180Q9UJW8 692 aa10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 RUVBL2Q9Y230 463 aaKnown RBP10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 NFS1Q9Y697 457 aa10.46□□□□□ -0.73
SMARCA4-213ENST00000587988 COL5A1P20908 1838 aaPredicted RBP10.46□□□□□ -0.74
SMARCA4-213ENST00000587988 PTPRZ1P23471 2315 aaPredicted RBP10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 KIR2DS5A0A0G2JLQ3 304 aa10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 A0A0G2JNG1 304 aa10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 CPED1A4D0V7 1026 aa10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 SMIM23A6NLE4 172 aa10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 OR5K4A6NMS3 321 aa10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 KIR2DS3K7RE56 304 aa10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 SLC30A4O14863 429 aa10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 ERLIN1O75477 346 aa10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 TSPAN12O95859 305 aa10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 NUDT17P0C025 328 aa10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 MTHFD1P11586 935 aaKnown RBP10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 SKIV2L2P42285 1042 aaKnown RBP10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 HALP42357 657 aa10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 SLCO1A2P46721 670 aa10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 SERPINB9P50453 376 aa10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 PLOD1Q02809 727 aaPredicted RBP10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 KIR2DS5Q14953 304 aa10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 ZKSCAN8Q15776 578 aaPredicted RBP10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 RSPO4Q2I0M5 234 aaPredicted RBP10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 PERM1Q5SV97 790 aa10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 GUSBP11Q6P575 273 aa10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 PIWIL4Q7Z3Z4 852 aaKnown RBP10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 ZNF761Q86XN6 746 aaPredicted RBP10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 CFAP61Q8NHU2 1237 aa10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 EPS8L3Q8TE67 593 aaKnown RBP10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 ANKRD49Q8WVL7 239 aa10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 TFGQ92734 400 aaPredicted RBP10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 NRTNQ99748 197 aa10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 CCDC77Q9BR77 488 aa10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 IMP3Q9NV31 184 aaKnown RBP10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 FTSJ1Q9UET6 329 aa10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 FETUBQ9UGM5 382 aa10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 SLC24A2Q9UI40 661 aa10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 PADI4Q9UM07 663 aa10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 PLAAQ9Y263 795 aa10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 IKBKGQ9Y6K9 419 aa10.45□□□□□ -0.74
SMARCA4-213ENST00000587988 RNF215Q9Y6U7 377 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms