RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 SEPT6Q14141 434 aa13.97□□□□□ -0.17
VMP1-206ENST00000587945 PARP6Q2NL67 630 aa13.97□□□□□ -0.17
VMP1-206ENST00000587945 ZRANB3Q5FWF4 1079 aa13.97□□□□□ -0.17
VMP1-206ENST00000587945 PRAMEF17Q5VTA0 474 aa13.97□□□□□ -0.17
VMP1-206ENST00000587945 KCTD11Q693B1 232 aa13.97□□□□□ -0.17
VMP1-206ENST00000587945 ARHGEF18Q6ZSZ5 1173 aa13.97□□□□□ -0.17
VMP1-206ENST00000587945 PEX26Q7Z412 305 aa13.97□□□□□ -0.17
VMP1-206ENST00000587945 SERPINA9Q86WD7 417 aa13.97□□□□□ -0.17
VMP1-206ENST00000587945 KLHDC8BQ8IXV7 354 aa13.97□□□□□ -0.17
VMP1-206ENST00000587945 D2HGDHQ8N465 521 aa13.97□□□□□ -0.17
VMP1-206ENST00000587945 ZFPM2Q8WW38 1151 aa13.97□□□□□ -0.17
VMP1-206ENST00000587945 DESI2Q9BSY9 194 aa13.97□□□□□ -0.17
VMP1-206ENST00000587945 TWSG1Q9GZX9 223 aa13.97□□□□□ -0.17
VMP1-206ENST00000587945 ZDHHC3Q9NYG2 299 aa13.97□□□□□ -0.17
VMP1-206ENST00000587945 KCND3Q9UK17 655 aa13.97□□□□□ -0.17
VMP1-206ENST00000587945 COLEC10Q9Y6Z7 277 aa13.97□□□□□ -0.17
VMP1-206ENST00000587945 CCDC78A2IDD5 438 aa13.96□□□□□ -0.17
VMP1-206ENST00000587945 KLHL33A6NCF5 533 aa13.96□□□□□ -0.17
VMP1-206ENST00000587945 CFAP99D6REC4 459 aa13.96□□□□□ -0.17
VMP1-206ENST00000587945 CREG1O75629 220 aa13.96□□□□□ -0.17
VMP1-206ENST00000587945 ZBTB11O95625 1053 aaPredicted RBP13.96□□□□□ -0.17
VMP1-206ENST00000587945 MT-ND3P03897 115 aa13.96□□□□□ -0.17
VMP1-206ENST00000587945 PDHA2P29803 388 aa13.96□□□□□ -0.17
VMP1-206ENST00000587945 RPS18P62269 152 aaKnown RBP13.96□□□□□ -0.17
VMP1-206ENST00000587945 POU6F1Q14863 301 aa13.96□□□□□ -0.17
VMP1-206ENST00000587945 LACTB2Q53H82 288 aaPredicted RBP13.96□□□□□ -0.17
VMP1-206ENST00000587945 CYB5D1Q6P9G0 228 aa13.96□□□□□ -0.17
VMP1-206ENST00000587945 TAS2R42Q7RTR8 314 aa13.96□□□□□ -0.17
VMP1-206ENST00000587945 KMT5CQ86Y97 462 aa13.96□□□□□ -0.17
VMP1-206ENST00000587945 PIANPQ8IYJ0 282 aa13.96□□□□□ -0.17
VMP1-206ENST00000587945 CLDN19Q8N6F1 224 aa13.96□□□□□ -0.17
VMP1-206ENST00000587945 PHC3Q8NDX5 983 aa13.96□□□□□ -0.17
VMP1-206ENST00000587945 PPP1R2P1Q96PQ5 205 aa13.96□□□□□ -0.17
VMP1-206ENST00000587945 FERD3LQ96RJ6 166 aa13.96□□□□□ -0.17
VMP1-206ENST00000587945 BAG1Q99933 345 aaPredicted RBP13.96□□□□□ -0.17
VMP1-206ENST00000587945 CCM2Q9BSQ5 444 aa13.96□□□□□ -0.17
VMP1-206ENST00000587945 TLR10Q9BXR5 811 aa13.96□□□□□ -0.17
VMP1-206ENST00000587945 OR52A5Q9H2C5 316 aa13.96□□□□□ -0.17
VMP1-206ENST00000587945 ACTL8Q9H568 366 aa13.96□□□□□ -0.17
VMP1-206ENST00000587945 COG4Q9H9E3 785 aa13.96□□□□□ -0.17
VMP1-206ENST00000587945 SOHLH2Q9NX45 425 aa13.96□□□□□ -0.17
VMP1-206ENST00000587945 FEZ2Q9UHY8 353 aaPredicted RBP13.96□□□□□ -0.17
VMP1-206ENST00000587945 POLHQ9Y253 713 aa13.96□□□□□ -0.17
VMP1-206ENST00000587945 TP53TG5Q9Y2B4 290 aa13.96□□□□□ -0.17
VMP1-206ENST00000587945 PCDHGA6Q9Y5G7 932 aa13.96□□□□□ -0.17
VMP1-206ENST00000587945 MYO18BQ8IUG5 2567 aa13.96□□□□□ -0.17
VMP1-206ENST00000587945 IGLV3-16A0A075B6K0 115 aa13.95□□□□□ -0.18
VMP1-206ENST00000587945 TRBV5-4A0A0C4DH59 114 aa13.95□□□□□ -0.18
VMP1-206ENST00000587945 GOLGA6L9A6NEM1 432 aa13.95□□□□□ -0.18
VMP1-206ENST00000587945 SLC9B1P1A6NJY1 282 aa13.95□□□□□ -0.18
VMP1-206ENST00000587945 ARHGAP6O43182 974 aa13.95□□□□□ -0.18
VMP1-206ENST00000587945 ACRV1P26436 265 aa13.95□□□□□ -0.18
VMP1-206ENST00000587945 NDUFS1P28331 727 aa13.95□□□□□ -0.18
VMP1-206ENST00000587945 PREPP48147 710 aa13.95□□□□□ -0.18
VMP1-206ENST00000587945 TUBB4BP68371 445 aa13.95□□□□□ -0.18
VMP1-206ENST00000587945 KLF1Q13351 362 aaPredicted RBP13.95□□□□□ -0.18
VMP1-206ENST00000587945 TUBB2AQ13885 445 aa13.95□□□□□ -0.18
VMP1-206ENST00000587945 IGFBP7Q16270 282 aa13.95□□□□□ -0.18
VMP1-206ENST00000587945 GPR33Q49SQ1 333 aa13.95□□□□□ -0.18
VMP1-206ENST00000587945 ZNF658BQ4V348 819 aaPredicted RBP13.95□□□□□ -0.18
VMP1-206ENST00000587945 GAS2L3Q86XJ1 694 aa13.95□□□□□ -0.18
VMP1-206ENST00000587945 TMEM126BQ8IUX1 230 aa13.95□□□□□ -0.18
VMP1-206ENST00000587945 TMEM139Q8IV31 216 aa13.95□□□□□ -0.18
VMP1-206ENST00000587945 UBL4BQ8N7F7 174 aa13.95□□□□□ -0.18
VMP1-206ENST00000587945 SLC38A9Q8NBW4 561 aa13.95□□□□□ -0.18
VMP1-206ENST00000587945 ACVR1CQ8NER5 493 aa13.95□□□□□ -0.18
VMP1-206ENST00000587945 HEXDCQ8WVB3 486 aa13.95□□□□□ -0.18
VMP1-206ENST00000587945 LCN9Q8WX39 176 aa13.95□□□□□ -0.18
VMP1-206ENST00000587945 LRRC45Q96CN5 670 aa13.95□□□□□ -0.18
VMP1-206ENST00000587945 ZNF501Q96CX3 271 aaPredicted RBP13.95□□□□□ -0.18
VMP1-206ENST00000587945 FCRL4Q96PJ5 515 aa13.95□□□□□ -0.18
VMP1-206ENST00000587945 TMEM121Q9BTD3 319 aa13.95□□□□□ -0.18
VMP1-206ENST00000587945 TUBB2BQ9BVA1 445 aa13.95□□□□□ -0.18
VMP1-206ENST00000587945 SRMSQ9H3Y6 488 aa13.95□□□□□ -0.18
VMP1-206ENST00000587945 LRRC40Q9H9A6 602 aa13.95□□□□□ -0.18
VMP1-206ENST00000587945 KCND1Q9NSA2 647 aa13.95□□□□□ -0.18
VMP1-206ENST00000587945 NLE1Q9NVX2 485 aaPredicted RBP13.95□□□□□ -0.18
VMP1-206ENST00000587945 POMT2Q9UKY4 750 aa13.95□□□□□ -0.18
VMP1-206ENST00000587945 HEBP2Q9Y5Z4 205 aa13.95□□□□□ -0.18
VMP1-206ENST00000587945 C17orf113A0A1B0GUU1 675 aa13.94□□□□□ -0.18
VMP1-206ENST00000587945 GSAPA4D1B5 854 aa13.94□□□□□ -0.18
VMP1-206ENST00000587945 OR51F1A6NGY5 319 aa13.94□□□□□ -0.18
VMP1-206ENST00000587945 CYSRT1A8MQ03 144 aa13.94□□□□□ -0.18
VMP1-206ENST00000587945 C21orf140B9A014 251 aa13.94□□□□□ -0.18
VMP1-206ENST00000587945 BTN3A3O00478 584 aa13.94□□□□□ -0.18
VMP1-206ENST00000587945 SCRG1O75711 98 aa13.94□□□□□ -0.18
VMP1-206ENST00000587945 DNAJB5O75953 348 aa13.94□□□□□ -0.18
VMP1-206ENST00000587945 CDH3P22223 829 aa13.94□□□□□ -0.18
VMP1-206ENST00000587945 CASRP41180 1078 aa13.94□□□□□ -0.18
VMP1-206ENST00000587945 PRKAA1Q13131 559 aa13.94□□□□□ -0.18
VMP1-206ENST00000587945 GPS2Q13227 327 aa13.94□□□□□ -0.18
VMP1-206ENST00000587945 PRKG2Q13237 762 aa13.94□□□□□ -0.18
VMP1-206ENST00000587945 DBN1Q16643 649 aa13.94□□□□□ -0.18
VMP1-206ENST00000587945 CCDC38Q502W7 563 aa13.94□□□□□ -0.18
VMP1-206ENST00000587945 TMTC4Q5T4D3 741 aa13.94□□□□□ -0.18
VMP1-206ENST00000587945 LCN10Q6JVE6 187 aa13.94□□□□□ -0.18
VMP1-206ENST00000587945 BPHLQ86WA6 291 aaPredicted RBP13.94□□□□□ -0.18
VMP1-206ENST00000587945 TTC13Q8NBP0 860 aa13.94□□□□□ -0.18
VMP1-206ENST00000587945 SLC35B2Q8TB61 432 aa13.94□□□□□ -0.18
VMP1-206ENST00000587945 ATG4AQ8WYN0 398 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms