RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 PPM1EQ8WY54 764 aa19.45■□□□□ 0.7
TRIM47-204ENST00000587339 C19orf60Q96EN9 201 aa19.45■□□□□ 0.7
TRIM47-204ENST00000587339 LRCH3Q96II8 777 aa19.45■□□□□ 0.7
TRIM47-204ENST00000587339 HIC2Q96JB3 615 aa19.45■□□□□ 0.7
TRIM47-204ENST00000587339 ZNF514Q96K75 400 aaPredicted RBP19.45■□□□□ 0.7
TRIM47-204ENST00000587339 HIST1H2AHQ96KK5 128 aa19.45■□□□□ 0.7
TRIM47-204ENST00000587339 KCNA7Q96RP8 456 aa19.45■□□□□ 0.7
TRIM47-204ENST00000587339 HIST1H2AJQ99878 128 aa19.45■□□□□ 0.7
TRIM47-204ENST00000587339 H2AFJQ9BTM1 129 aa19.45■□□□□ 0.7
TRIM47-204ENST00000587339 CD244Q9BZW8 370 aa19.45■□□□□ 0.7
TRIM47-204ENST00000587339 SLC6A17Q9H1V8 727 aa19.45■□□□□ 0.7
TRIM47-204ENST00000587339 ATXN10Q9UBB4 475 aa19.45■□□□□ 0.7
TRIM47-204ENST00000587339 ATG2BQ96BY7 2078 aa19.45■□□□□ 0.7
TRIM47-204ENST00000587339 GFYI3L273 518 aa19.45■□□□□ 0.7
TRIM47-204ENST00000587339 SLC16A5O15375 505 aa19.45■□□□□ 0.7
TRIM47-204ENST00000587339 PCCBP05166 539 aa19.45■□□□□ 0.7
TRIM47-204ENST00000587339 GLULP15104 373 aa19.45■□□□□ 0.7
TRIM47-204ENST00000587339 NQO1P15559 274 aaKnown RBP19.45■□□□□ 0.7
TRIM47-204ENST00000587339 PRDX3P30048 256 aaKnown RBP19.45■□□□□ 0.7
TRIM47-204ENST00000587339 GTF2H2Q13888 395 aa19.45■□□□□ 0.7
TRIM47-204ENST00000587339 WSCD2Q2TBF2 565 aa19.45■□□□□ 0.7
TRIM47-204ENST00000587339 BCL7AQ4VC05 210 aa19.45■□□□□ 0.7
TRIM47-204ENST00000587339 CDKL4Q5MAI5 379 aa19.45■□□□□ 0.7
TRIM47-204ENST00000587339 GTF2H2CQ6P1K8 395 aa19.45■□□□□ 0.7
TRIM47-204ENST00000587339 ADAMTSL4Q6UY14 1074 aa19.45■□□□□ 0.7
TRIM47-204ENST00000587339 SYVN1Q86TM6 617 aa19.45■□□□□ 0.7
TRIM47-204ENST00000587339 OR14C36Q8NHC7 312 aa19.45■□□□□ 0.7
TRIM47-204ENST00000587339 ACTRT2Q8TDY3 377 aa19.45■□□□□ 0.7
TRIM47-204ENST00000587339 TWIST2Q8WVJ9 160 aa19.45■□□□□ 0.7
TRIM47-204ENST00000587339 GLMNQ92990 594 aa19.45■□□□□ 0.7
TRIM47-204ENST00000587339 ZNF382Q96SR6 550 aa19.45■□□□□ 0.7
TRIM47-204ENST00000587339 NOL11Q9H8H0 719 aaKnown RBP19.45■□□□□ 0.7
TRIM47-204ENST00000587339 ANKRD12Q6UB98 2062 aa19.44■□□□□ 0.7
TRIM47-204ENST00000587339 NARSO43776 548 aaKnown RBP19.44■□□□□ 0.7
TRIM47-204ENST00000587339 VEGFDO43915 354 aa19.44■□□□□ 0.7
TRIM47-204ENST00000587339 CCNT2O60583 730 aaKnown RBP19.44■□□□□ 0.7
TRIM47-204ENST00000587339 CYP2A7P20853 494 aa19.44■□□□□ 0.7
TRIM47-204ENST00000587339 PBLDP30039 288 aaPredicted RBP19.44■□□□□ 0.7
TRIM47-204ENST00000587339 AGERQ15109 404 aa19.44■□□□□ 0.7
TRIM47-204ENST00000587339 FAM219BQ5XKK7 198 aa19.44■□□□□ 0.7
TRIM47-204ENST00000587339 TMEM198Q66K66 360 aa19.44■□□□□ 0.7
TRIM47-204ENST00000587339 MBOAT1Q6ZNC8 495 aa19.44■□□□□ 0.7
TRIM47-204ENST00000587339 GPRIN3Q6ZVF9 776 aa19.44■□□□□ 0.7
TRIM47-204ENST00000587339 GOLGA7Q7Z5G4 137 aa19.44■□□□□ 0.7
TRIM47-204ENST00000587339 HEATR4Q86WZ0 1026 aa19.44■□□□□ 0.7
TRIM47-204ENST00000587339 TEX9Q8N6V9 391 aa19.44■□□□□ 0.7
TRIM47-204ENST00000587339 OR52B6Q8NGF0 335 aa19.44■□□□□ 0.7
TRIM47-204ENST00000587339 TMEM79Q9BSE2 394 aa19.44■□□□□ 0.7
TRIM47-204ENST00000587339 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.44■□□□□ 0.7
TRIM47-204ENST00000587339 OPTCQ9UBM4 332 aa19.44■□□□□ 0.7
TRIM47-204ENST00000587339 ZNF225Q9UK10 706 aa19.44■□□□□ 0.7
TRIM47-204ENST00000587339 G3BP2Q9UN86 482 aaKnown RBP19.44■□□□□ 0.7
TRIM47-204ENST00000587339 SLC5A10A0PJK1 596 aa19.43■□□□□ 0.7
TRIM47-204ENST00000587339 PLRG1O43660 514 aaKnown RBP19.43■□□□□ 0.7
TRIM47-204ENST00000587339 ARL1P40616 181 aaPredicted RBP19.43■□□□□ 0.7
TRIM47-204ENST00000587339 GDF5P43026 501 aa19.43■□□□□ 0.7
TRIM47-204ENST00000587339 CPA2P48052 419 aa19.43■□□□□ 0.7
TRIM47-204ENST00000587339 PREPP48147 710 aa19.43■□□□□ 0.7
TRIM47-204ENST00000587339 PKNOX1P55347 436 aa19.43■□□□□ 0.7
TRIM47-204ENST00000587339 RPS21P63220 83 aaKnown RBP19.43■□□□□ 0.7
TRIM47-204ENST00000587339 CDKL1Q00532 357 aa19.43■□□□□ 0.7
TRIM47-204ENST00000587339 TTC31Q49AM3 519 aaPredicted RBP19.43■□□□□ 0.7
TRIM47-204ENST00000587339 METTL2BQ6P1Q9 378 aaKnown RBP19.43■□□□□ 0.7
TRIM47-204ENST00000587339 RPLP0P6Q8NHW5 317 aa19.43■□□□□ 0.7
TRIM47-204ENST00000587339 MCOLN3Q8TDD5 553 aa19.43■□□□□ 0.7
TRIM47-204ENST00000587339 UBTD2Q8WUN7 234 aa19.43■□□□□ 0.7
TRIM47-204ENST00000587339 ATP6V1E2Q96A05 226 aa19.43■□□□□ 0.7
TRIM47-204ENST00000587339 FAM131CQ96AQ9 280 aa19.43■□□□□ 0.7
TRIM47-204ENST00000587339 COX14Q96I36 57 aa19.43■□□□□ 0.7
TRIM47-204ENST00000587339 CATSPER2Q96P56 530 aa19.43■□□□□ 0.7
TRIM47-204ENST00000587339 BTBD10Q9BSF8 475 aa19.43■□□□□ 0.7
TRIM47-204ENST00000587339 IPPKQ9H8X2 491 aa19.43■□□□□ 0.7
TRIM47-204ENST00000587339 SCML1Q9UN30 329 aa19.43■□□□□ 0.7
TRIM47-204ENST00000587339 GPR34Q9UPC5 381 aa19.43■□□□□ 0.7
TRIM47-204ENST00000587339 ZFR2Q9UPR6 939 aaKnown RBP19.43■□□□□ 0.7
TRIM47-204ENST00000587339 ANGPTL3Q9Y5C1 460 aa19.43■□□□□ 0.7
TRIM47-204ENST00000587339 ATP6AP2A0A1C7CYW4 349 aa19.43■□□□□ 0.7
TRIM47-204ENST00000587339 PRR23AA6NEV1 266 aa19.43■□□□□ 0.7
TRIM47-204ENST00000587339 PIP5K1BO14986 540 aa19.43■□□□□ 0.7
TRIM47-204ENST00000587339 LILRB5O75023 590 aa19.43■□□□□ 0.7
TRIM47-204ENST00000587339 ATP6AP2O75787 350 aa19.43■□□□□ 0.7
TRIM47-204ENST00000587339 MATN4O95460 622 aa19.43■□□□□ 0.7
TRIM47-204ENST00000587339 PAK4O96013 591 aaPredicted RBP19.43■□□□□ 0.7
TRIM47-204ENST00000587339 UROSP10746 265 aa19.43■□□□□ 0.7
TRIM47-204ENST00000587339 ZNF8P17098 575 aaPredicted RBP19.43■□□□□ 0.7
TRIM47-204ENST00000587339 FBXO43Q4G163 708 aa19.43■□□□□ 0.7
TRIM47-204ENST00000587339 DDIASQ8IXT1 998 aa19.43■□□□□ 0.7
TRIM47-204ENST00000587339 LILRA3Q8N6C8 439 aaPredicted RBP19.43■□□□□ 0.7
TRIM47-204ENST00000587339 FAM3CQ92520 227 aa19.43■□□□□ 0.7
TRIM47-204ENST00000587339 CMTM5Q96DZ9 223 aa19.43■□□□□ 0.7
TRIM47-204ENST00000587339 SIPA1Q96FS4 1042 aa19.43■□□□□ 0.7
TRIM47-204ENST00000587339 TBC1D10AQ9BXI6 508 aa19.43■□□□□ 0.7
TRIM47-204ENST00000587339 CD248Q9HCU0 757 aa19.43■□□□□ 0.7
TRIM47-204ENST00000587339 STK38LQ9Y2H1 464 aa19.43■□□□□ 0.7
TRIM47-204ENST00000587339 TIMM22Q9Y584 194 aa19.43■□□□□ 0.7
TRIM47-204ENST00000587339 K7EPI3 171 aa19.42■□□□□ 0.7
TRIM47-204ENST00000587339 GYG2O15488 501 aa19.42■□□□□ 0.7
TRIM47-204ENST00000587339 OR4F21O95013 312 aa19.42■□□□□ 0.7
TRIM47-204ENST00000587339 CHEK2O96017 543 aa19.42■□□□□ 0.7
TRIM47-204ENST00000587339 OTCP00480 354 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms