RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 MBD3O95983 291 aa11.54□□□□□ -0.56
BRCA1-225ENST00000586385 KRT1P04264 644 aa11.54□□□□□ -0.56
BRCA1-225ENST00000586385 TMEM253P0C7T8 217 aa11.54□□□□□ -0.56
BRCA1-225ENST00000586385 MSL3P1P0C860 447 aa11.54□□□□□ -0.56
BRCA1-225ENST00000586385 PVRP15151 417 aa11.54□□□□□ -0.56
BRCA1-225ENST00000586385 HLA-DPA1P20036 260 aa11.54□□□□□ -0.56
BRCA1-225ENST00000586385 LMAN1P49257 510 aa11.54□□□□□ -0.56
BRCA1-225ENST00000586385 MSLNQ13421 630 aaPredicted RBP11.54□□□□□ -0.56
BRCA1-225ENST00000586385 LLGL1Q15334 1064 aa11.54□□□□□ -0.56
BRCA1-225ENST00000586385 SLC18A3Q16572 532 aa11.54□□□□□ -0.56
BRCA1-225ENST00000586385 BCL7AQ4VC05 210 aa11.54□□□□□ -0.56
BRCA1-225ENST00000586385 VWA5B1Q5TIE3 1220 aa11.54□□□□□ -0.56
BRCA1-225ENST00000586385 ZDHHC20Q5W0Z9 365 aa11.54□□□□□ -0.56
BRCA1-225ENST00000586385 CCDC70Q6NSX1 233 aa11.54□□□□□ -0.56
BRCA1-225ENST00000586385 MED25Q71SY5 747 aa11.54□□□□□ -0.56
BRCA1-225ENST00000586385 MRGPREQ86SM8 312 aa11.54□□□□□ -0.56
BRCA1-225ENST00000586385 LUZP1Q86V48 1076 aa11.54□□□□□ -0.56
BRCA1-225ENST00000586385 TICAM1Q8IUC6 712 aa11.54□□□□□ -0.56
BRCA1-225ENST00000586385 ZNF567Q8N184 647 aa11.54□□□□□ -0.56
BRCA1-225ENST00000586385 CISD2Q8N5K1 135 aaKnown RBP11.54□□□□□ -0.56
BRCA1-225ENST00000586385 TMEM102Q8N9M5 508 aaPredicted RBP11.54□□□□□ -0.56
BRCA1-225ENST00000586385 SLC35G2Q8TBE7 412 aa11.54□□□□□ -0.56
BRCA1-225ENST00000586385 ZNF398Q8TD17 642 aa11.54□□□□□ -0.56
BRCA1-225ENST00000586385 BLOC1S5Q8TDH9 187 aa11.54□□□□□ -0.56
BRCA1-225ENST00000586385 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.54□□□□□ -0.56
BRCA1-225ENST00000586385 CTNNBL1Q8WYA6 563 aaPredicted RBP11.54□□□□□ -0.56
BRCA1-225ENST00000586385 CLIP3Q96DZ5 547 aa11.54□□□□□ -0.56
BRCA1-225ENST00000586385 LINC00615Q96LM1 132 aaPredicted RBP11.54□□□□□ -0.56
BRCA1-225ENST00000586385 GBP4Q96PP9 640 aa11.54□□□□□ -0.56
BRCA1-225ENST00000586385 FCRL5Q96RD9 977 aa11.54□□□□□ -0.56
BRCA1-225ENST00000586385 KLHL25Q9H0H3 589 aa11.54□□□□□ -0.56
BRCA1-225ENST00000586385 ACTR5Q9H9F9 607 aaPredicted RBP11.54□□□□□ -0.56
BRCA1-225ENST00000586385 C1GALT1Q9NS00 363 aa11.54□□□□□ -0.56
BRCA1-225ENST00000586385 LUC7L2Q9Y383 392 aaKnown RBP11.54□□□□□ -0.56
BRCA1-225ENST00000586385 HYOU1Q9Y4L1 999 aa11.54□□□□□ -0.56
BRCA1-225ENST00000586385 ARL5AQ9Y689 179 aa11.54□□□□□ -0.56
BRCA1-225ENST00000586385 SEC16AO15027 2179 aa11.54□□□□□ -0.56
BRCA1-225ENST00000586385 PRAMEF1O95521 474 aa11.53□□□□□ -0.56
BRCA1-225ENST00000586385 POLBP06746 335 aa11.53□□□□□ -0.56
BRCA1-225ENST00000586385 CTSBP07858 339 aa11.53□□□□□ -0.56
BRCA1-225ENST00000586385 CDH3P22223 829 aa11.53□□□□□ -0.56
BRCA1-225ENST00000586385 PRDX3P30048 256 aaKnown RBP11.53□□□□□ -0.56
BRCA1-225ENST00000586385 AKT1P31749 480 aa11.53□□□□□ -0.56
BRCA1-225ENST00000586385 CDKN2BP42772 138 aa11.53□□□□□ -0.56
BRCA1-225ENST00000586385 PREPP48147 710 aa11.53□□□□□ -0.56
BRCA1-225ENST00000586385 GABRA4P48169 554 aa11.53□□□□□ -0.56
BRCA1-225ENST00000586385 XIAPP98170 497 aa11.53□□□□□ -0.56
BRCA1-225ENST00000586385 OLIG2Q13516 323 aa11.53□□□□□ -0.56
BRCA1-225ENST00000586385 ITGA9Q13797 1035 aa11.53□□□□□ -0.56
BRCA1-225ENST00000586385 ZIC1Q15915 447 aa11.53□□□□□ -0.56
BRCA1-225ENST00000586385 LONRF2Q1L5Z9 754 aa11.53□□□□□ -0.56
BRCA1-225ENST00000586385 TMTC4Q5T4D3 741 aa11.53□□□□□ -0.56
BRCA1-225ENST00000586385 LRRC38Q5VT99 294 aa11.53□□□□□ -0.56
BRCA1-225ENST00000586385 ARMC6Q6NXE6 501 aa11.53□□□□□ -0.56
BRCA1-225ENST00000586385 CDHR3Q6ZTQ4 885 aa11.53□□□□□ -0.56
BRCA1-225ENST00000586385 GLT6D1Q7Z4J2 308 aa11.53□□□□□ -0.56
BRCA1-225ENST00000586385 HPS6Q86YV9 775 aa11.53□□□□□ -0.56
BRCA1-225ENST00000586385 IPMKQ8NFU5 416 aa11.53□□□□□ -0.56
BRCA1-225ENST00000586385 TRAPPC9Q96Q05 1148 aa11.53□□□□□ -0.56
BRCA1-225ENST00000586385 SLC29A3Q9BZD2 475 aa11.53□□□□□ -0.56
BRCA1-225ENST00000586385 ZBTB20Q9HC78 741 aaPredicted RBP11.53□□□□□ -0.56
BRCA1-225ENST00000586385 FAM60AQ9NP50 221 aa11.53□□□□□ -0.56
BRCA1-225ENST00000586385 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.53□□□□□ -0.56
BRCA1-225ENST00000586385 HACD3Q9P035 362 aa11.53□□□□□ -0.56
BRCA1-225ENST00000586385 MAP10Q9P2G4 905 aa11.53□□□□□ -0.56
BRCA1-225ENST00000586385 ACSL5Q9ULC5 683 aa11.53□□□□□ -0.56
BRCA1-225ENST00000586385 POLEQ07864 2286 aa11.53□□□□□ -0.56
BRCA1-225ENST00000586385 LRBAP50851 2863 aa11.53□□□□□ -0.56
BRCA1-225ENST00000586385 TEP1Q99973 2627 aaKnown RBP11.53□□□□□ -0.56
BRCA1-225ENST00000586385 ENO4A6NNW6 628 aa11.52□□□□□ -0.57
BRCA1-225ENST00000586385 AGAP14A8MT82 685 aa11.52□□□□□ -0.57
BRCA1-225ENST00000586385 ZNF749O43361 778 aa11.52□□□□□ -0.57
BRCA1-225ENST00000586385 AGTP01019 485 aa11.52□□□□□ -0.57
BRCA1-225ENST00000586385 SLC35G4P0C7Q5 338 aa11.52□□□□□ -0.57
BRCA1-225ENST00000586385 CBSLP0DN79 551 aa11.52□□□□□ -0.57
BRCA1-225ENST00000586385 ZFXP17010 805 aaPredicted RBP11.52□□□□□ -0.57
BRCA1-225ENST00000586385 MSH3P20585 1137 aa11.52□□□□□ -0.57
BRCA1-225ENST00000586385 CYP2A7P20853 494 aa11.52□□□□□ -0.57
BRCA1-225ENST00000586385 CBSP35520 551 aa11.52□□□□□ -0.57
BRCA1-225ENST00000586385 UBASH3AP57075 661 aa11.52□□□□□ -0.57
BRCA1-225ENST00000586385 C1QL3Q5VWW1 255 aa11.52□□□□□ -0.57
BRCA1-225ENST00000586385 CRYBG3Q68DQ2 2970 aa11.52□□□□□ -0.57
BRCA1-225ENST00000586385 IGFL3Q6UXB1 125 aa11.52□□□□□ -0.57
BRCA1-225ENST00000586385 CFAP206Q8IYR0 622 aa11.52□□□□□ -0.57
BRCA1-225ENST00000586385 ADGRF3Q8IZF5 1079 aa11.52□□□□□ -0.57
BRCA1-225ENST00000586385 ACVR1CQ8NER5 493 aa11.52□□□□□ -0.57
BRCA1-225ENST00000586385 OR4K2Q8NGD2 314 aa11.52□□□□□ -0.57
BRCA1-225ENST00000586385 TFB1MQ8WVM0 346 aaKnown RBP11.52□□□□□ -0.57
BRCA1-225ENST00000586385 MAK16Q9BXY0 300 aaKnown RBP11.52□□□□□ -0.57
BRCA1-225ENST00000586385 OR52A5Q9H2C5 316 aa11.52□□□□□ -0.57
BRCA1-225ENST00000586385 ZNF552Q9H707 407 aaPredicted RBP11.52□□□□□ -0.57
BRCA1-225ENST00000586385 C10orf88Q9H8K7 445 aa11.52□□□□□ -0.57
BRCA1-225ENST00000586385 C5AR2Q9P296 337 aa11.52□□□□□ -0.57
BRCA1-225ENST00000586385 LCMT1Q9UIC8 334 aa11.52□□□□□ -0.57
BRCA1-225ENST00000586385 FKBPLQ9UIM3 349 aa11.52□□□□□ -0.57
BRCA1-225ENST00000586385 B3GNT3Q9Y2A9 372 aa11.52□□□□□ -0.57
BRCA1-225ENST00000586385 CSAG2Q9Y5P2 127 aa11.52□□□□□ -0.57
BRCA1-225ENST00000586385 GSAPA4D1B5 854 aa11.51□□□□□ -0.57
BRCA1-225ENST00000586385 STX7O15400 261 aaKnown RBP11.51□□□□□ -0.57
BRCA1-225ENST00000586385 CST8O60676 142 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms