RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 MID2Q9UJV3 735 aa15.81■□□□□ 0.12
SS18-226ENST00000585241 PILRBQ9UKJ0 227 aa15.81■□□□□ 0.12
SS18-226ENST00000585241 A0A1B0GTW7 788 aa15.8■□□□□ 0.12
SS18-226ENST00000585241 GFYI3L273 518 aa15.8■□□□□ 0.12
SS18-226ENST00000585241 TK2O00142 265 aa15.8■□□□□ 0.12
SS18-226ENST00000585241 SLC16A5O15375 505 aa15.8■□□□□ 0.12
SS18-226ENST00000585241 TNFP01375 233 aa15.8■□□□□ 0.12
SS18-226ENST00000585241 CHN1P15882 459 aa15.8■□□□□ 0.12
SS18-226ENST00000585241 ACADLP28330 430 aa15.8■□□□□ 0.12
SS18-226ENST00000585241 PDHA2P29803 388 aa15.8■□□□□ 0.12
SS18-226ENST00000585241 PREPP48147 710 aa15.8■□□□□ 0.12
SS18-226ENST00000585241 GLRBP48167 497 aa15.8■□□□□ 0.12
SS18-226ENST00000585241 BLKP51451 505 aa15.8■□□□□ 0.12
SS18-226ENST00000585241 OR4D1Q15615 310 aa15.8■□□□□ 0.12
SS18-226ENST00000585241 PPP1R3AQ16821 1122 aa15.8■□□□□ 0.12
SS18-226ENST00000585241 SBSNQ6UWP8 590 aa15.8■□□□□ 0.12
SS18-226ENST00000585241 LAYNQ6UX15 382 aa15.8■□□□□ 0.12
SS18-226ENST00000585241 CEP68Q76N32 757 aa15.8■□□□□ 0.12
SS18-226ENST00000585241 CHST15Q7LFX5 561 aaPredicted RBP15.8■□□□□ 0.12
SS18-226ENST00000585241 PHACTR4Q8IZ21 702 aa15.8■□□□□ 0.12
SS18-226ENST00000585241 ARMC2Q8NEN0 867 aa15.8■□□□□ 0.12
SS18-226ENST00000585241 STAG3L4Q8TBR4 150 aa15.8■□□□□ 0.12
SS18-226ENST00000585241 MDM1Q8TC05 714 aa15.8■□□□□ 0.12
SS18-226ENST00000585241 ASB11Q8WXH4 323 aa15.8■□□□□ 0.12
SS18-226ENST00000585241 SKA1Q96BD8 255 aa15.8■□□□□ 0.12
SS18-226ENST00000585241 UNKQ9C0B0 810 aaKnown RBP15.8■□□□□ 0.12
SS18-226ENST00000585241 ALG9Q9H6U8 611 aa15.8■□□□□ 0.12
SS18-226ENST00000585241 KLC4Q9NSK0 619 aa15.8■□□□□ 0.12
SS18-226ENST00000585241 MOSPD1Q9UJG1 213 aa15.8■□□□□ 0.12
SS18-226ENST00000585241 ACSL5Q9ULC5 683 aa15.8■□□□□ 0.12
SS18-226ENST00000585241 GPSM3Q9Y4H4 160 aa15.8■□□□□ 0.12
SS18-226ENST00000585241 ST14Q9Y5Y6 855 aa15.8■□□□□ 0.12
SS18-226ENST00000585241 CACNA1EQ15878 2313 aa15.8■□□□□ 0.12
SS18-226ENST00000585241 NPEPPSL1A6NEC2 478 aa15.79■□□□□ 0.12
SS18-226ENST00000585241 H3BM21 787 aa15.79■□□□□ 0.12
SS18-226ENST00000585241 CDC7O00311 574 aa15.79■□□□□ 0.12
SS18-226ENST00000585241 BTN3A1O00481 513 aa15.79■□□□□ 0.12
SS18-226ENST00000585241 PSIP1O75475 530 aaKnown RBP15.79■□□□□ 0.12
SS18-226ENST00000585241 CSF2P04141 144 aa15.79■□□□□ 0.12
SS18-226ENST00000585241 C8GP07360 202 aa15.79■□□□□ 0.12
SS18-226ENST00000585241 NME1P15531 152 aaKnown RBP15.79■□□□□ 0.12
SS18-226ENST00000585241 GNSP15586 552 aa15.79■□□□□ 0.12
SS18-226ENST00000585241 KCNC1P48547 511 aa15.79■□□□□ 0.12
SS18-226ENST00000585241 CTBSQ01459 385 aa15.79■□□□□ 0.12
SS18-226ENST00000585241 TEAD4Q15561 434 aa15.79■□□□□ 0.12
SS18-226ENST00000585241 TSNQ15631 228 aaKnown RBP15.79■□□□□ 0.12
SS18-226ENST00000585241 WASH2PQ6VEQ5 465 aa15.79■□□□□ 0.12
SS18-226ENST00000585241 ZYG11AQ6WRX3 759 aa15.79■□□□□ 0.12
SS18-226ENST00000585241 PDZD3Q86UT5 571 aa15.79■□□□□ 0.12
SS18-226ENST00000585241 SYT12Q8IV01 421 aa15.79■□□□□ 0.12
SS18-226ENST00000585241 HID1Q8IV36 788 aa15.79■□□□□ 0.12
SS18-226ENST00000585241 FBXO15Q8NCQ5 510 aaPredicted RBP15.79■□□□□ 0.12
SS18-226ENST00000585241 GPBAR1Q8TDU6 330 aa15.79■□□□□ 0.12
SS18-226ENST00000585241 SCYL1Q96KG9 808 aa15.79■□□□□ 0.12
SS18-226ENST00000585241 SLC12A9Q9BXP2 914 aa15.79■□□□□ 0.12
SS18-226ENST00000585241 ERVMER34-1Q9H9K5 563 aa15.79■□□□□ 0.12
SS18-226ENST00000585241 RDH14Q9HBH5 336 aa15.79■□□□□ 0.12
SS18-226ENST00000585241 WASH6PQ9NQA3 447 aa15.79■□□□□ 0.12
SS18-226ENST00000585241 COPG2Q9UBF2 871 aa15.79■□□□□ 0.12
SS18-226ENST00000585241 KLF15Q9UIH9 416 aa15.79■□□□□ 0.12
SS18-226ENST00000585241 PCOLCE2Q9UKZ9 415 aa15.79■□□□□ 0.12
SS18-226ENST00000585241 DNAJC16Q9Y2G8 782 aa15.79■□□□□ 0.12
SS18-226ENST00000585241 PLEKHM1Q9Y4G2 1056 aa15.79■□□□□ 0.12
SS18-226ENST00000585241 G3V2L1 256 aa15.78■□□□□ 0.12
SS18-226ENST00000585241 BIRC5O15392 142 aa15.78■□□□□ 0.12
SS18-226ENST00000585241 KLK8O60259 260 aa15.78■□□□□ 0.12
SS18-226ENST00000585241 ENO2P09104 434 aaPredicted RBP15.78■□□□□ 0.12
SS18-226ENST00000585241 MTHFD2P13995 350 aa15.78■□□□□ 0.12
SS18-226ENST00000585241 SERPINB4P48594 390 aa15.78■□□□□ 0.12
SS18-226ENST00000585241 ATP1A2P50993 1020 aa15.78■□□□□ 0.12
SS18-226ENST00000585241 NFKB2Q00653 900 aa15.78■□□□□ 0.12
SS18-226ENST00000585241 SIM2Q14190 667 aaPredicted RBP15.78■□□□□ 0.12
SS18-226ENST00000585241 PCLAFQ15004 111 aa15.78■□□□□ 0.12
SS18-226ENST00000585241 SEPT7Q16181 437 aaKnown RBP15.78■□□□□ 0.12
SS18-226ENST00000585241 CAPRIN2Q6IMN6 1127 aaKnown RBP15.78■□□□□ 0.12
SS18-226ENST00000585241 NRROSQ86YC3 692 aa15.78■□□□□ 0.12
SS18-226ENST00000585241 DLG3Q92796 817 aa15.78■□□□□ 0.12
SS18-226ENST00000585241 RMDN2Q96LZ7 410 aa15.78■□□□□ 0.12
SS18-226ENST00000585241 TMEM168Q9H0V1 697 aa15.78■□□□□ 0.12
SS18-226ENST00000585241 TMEM74BQ9NUR3 256 aa15.78■□□□□ 0.12
SS18-226ENST00000585241 INTS9Q9NV88 658 aaKnown RBP15.78■□□□□ 0.12
SS18-226ENST00000585241 FAM8A1Q9UBU6 413 aa15.78■□□□□ 0.12
SS18-226ENST00000585241 ADAMTS6Q9UKP5 1117 aa15.78■□□□□ 0.12
SS18-226ENST00000585241 KCNK6Q9Y257 313 aa15.78■□□□□ 0.12
SS18-226ENST00000585241 OARD1Q9Y530 152 aa15.78■□□□□ 0.12
SS18-226ENST00000585241 ZFC3H1O60293 1989 aaKnown RBP15.78■□□□□ 0.12
SS18-226ENST00000585241 KNL1Q8NG31 2342 aa15.78■□□□□ 0.12
SS18-226ENST00000585241 ATXN2Q99700 1313 aaKnown RBP15.77■□□□□ 0.12
SS18-226ENST00000585241 A6NCN8 305 aa15.77■□□□□ 0.12
SS18-226ENST00000585241 SYCE1LA8MT33 242 aa15.77■□□□□ 0.12
SS18-226ENST00000585241 BPGMP07738 259 aa15.77■□□□□ 0.12
SS18-226ENST00000585241 CPA3P15088 417 aa15.77■□□□□ 0.12
SS18-226ENST00000585241 IDSP22304 550 aa15.77■□□□□ 0.12
SS18-226ENST00000585241 CTSKP43235 329 aa15.77■□□□□ 0.12
SS18-226ENST00000585241 CSNK1EP49674 416 aaKnown RBP15.77■□□□□ 0.12
SS18-226ENST00000585241 C21orf59P57076 290 aa15.77■□□□□ 0.12
SS18-226ENST00000585241 CDKL1Q00532 357 aa15.77■□□□□ 0.12
SS18-226ENST00000585241 ILF3Q12906 894 aaKnown RBP eCLIP15.77■□□□□ 0.12
SS18-226ENST00000585241 CDKL4Q5MAI5 379 aa15.77■□□□□ 0.12
SS18-226ENST00000585241 HHATQ5VTY9 493 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms