RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 HIBCHQ6NVY1 386 aaPredicted RBP15.86■□□□□ 0.13
ERBB2-222ENST00000584908 SDCCAG8Q86SQ7 713 aaPredicted RBP15.86■□□□□ 0.13
ERBB2-222ENST00000584908 LDB1Q86U70 411 aaPredicted RBP15.86■□□□□ 0.13
ERBB2-222ENST00000584908 AGBL5Q8NDL9 886 aa15.86■□□□□ 0.13
ERBB2-222ENST00000584908 RCBTB1Q8NDN9 531 aa15.86■□□□□ 0.13
ERBB2-222ENST00000584908 RSC1A1Q92681 617 aa15.86■□□□□ 0.13
ERBB2-222ENST00000584908 TRIM51Q9BSJ1 452 aa15.86■□□□□ 0.13
ERBB2-222ENST00000584908 AKAP7Q9P0M2 348 aaPredicted RBP15.86■□□□□ 0.13
ERBB2-222ENST00000584908 SLC24A2Q9UI40 661 aa15.86■□□□□ 0.13
ERBB2-222ENST00000584908 RPS6KL1Q9Y6S9 549 aa15.86■□□□□ 0.13
ERBB2-222ENST00000584908 COLEC10Q9Y6Z7 277 aa15.86■□□□□ 0.13
ERBB2-222ENST00000584908 ADAMTS20P59510 1910 aa15.85■□□□□ 0.13
ERBB2-222ENST00000584908 IFRD1O00458 451 aaPredicted RBP15.85■□□□□ 0.13
ERBB2-222ENST00000584908 NVLO15381 856 aaKnown RBP15.85■□□□□ 0.13
ERBB2-222ENST00000584908 GPC4O75487 556 aa15.85■□□□□ 0.13
ERBB2-222ENST00000584908 NDUFS3O75489 264 aa15.85■□□□□ 0.13
ERBB2-222ENST00000584908 SEC31AO94979 1220 aaKnown RBP15.85■□□□□ 0.13
ERBB2-222ENST00000584908 JMJD7P0C870 316 aa15.85■□□□□ 0.13
ERBB2-222ENST00000584908 HGFP14210 728 aa15.85■□□□□ 0.13
ERBB2-222ENST00000584908 AMD1P17707 334 aa15.85■□□□□ 0.13
ERBB2-222ENST00000584908 ACADLP28330 430 aa15.85■□□□□ 0.13
ERBB2-222ENST00000584908 CCR7P32248 378 aa15.85■□□□□ 0.13
ERBB2-222ENST00000584908 EIF2S3P41091 472 aaKnown RBP15.85■□□□□ 0.13
ERBB2-222ENST00000584908 MAPK9P45984 424 aa15.85■□□□□ 0.13
ERBB2-222ENST00000584908 PREPP48147 710 aa15.85■□□□□ 0.13
ERBB2-222ENST00000584908 BOP1Q14137 746 aaKnown RBP15.85■□□□□ 0.13
ERBB2-222ENST00000584908 NEPROQ6NW34 567 aa15.85■□□□□ 0.13
ERBB2-222ENST00000584908 DUS1LQ6P1R4 473 aaKnown RBP15.85■□□□□ 0.13
ERBB2-222ENST00000584908 KLHL35Q6PF15 583 aa15.85■□□□□ 0.13
ERBB2-222ENST00000584908 CILP2Q8IUL8 1156 aa15.85■□□□□ 0.13
ERBB2-222ENST00000584908 LMNTD2Q8IXW0 634 aa15.85■□□□□ 0.13
ERBB2-222ENST00000584908 ELMO1Q92556 727 aa15.85■□□□□ 0.13
ERBB2-222ENST00000584908 LPGAT1Q92604 370 aa15.85■□□□□ 0.13
ERBB2-222ENST00000584908 ZNF669Q96BR6 464 aaPredicted RBP15.85■□□□□ 0.13
ERBB2-222ENST00000584908 STAMBPL1Q96FJ0 436 aa15.85■□□□□ 0.13
ERBB2-222ENST00000584908 SNF8Q96H20 258 aa15.85■□□□□ 0.13
ERBB2-222ENST00000584908 BIRC8Q96P09 236 aa15.85■□□□□ 0.13
ERBB2-222ENST00000584908 KRT12Q99456 494 aa15.85■□□□□ 0.13
ERBB2-222ENST00000584908 NAT9Q9BTE0 207 aa15.85■□□□□ 0.13
ERBB2-222ENST00000584908 TSSK1BQ9BXA7 367 aa15.85■□□□□ 0.13
ERBB2-222ENST00000584908 MVB12BQ9H7P6 319 aa15.85■□□□□ 0.13
ERBB2-222ENST00000584908 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.85■□□□□ 0.13
ERBB2-222ENST00000584908 SEMA5BQ9P283 1151 aa15.85■□□□□ 0.13
ERBB2-222ENST00000584908 GNPTGQ9UJJ9 305 aa15.85■□□□□ 0.13
ERBB2-222ENST00000584908 CDYLQ9Y232 598 aa15.85■□□□□ 0.13
ERBB2-222ENST00000584908 FAM169AQ9Y6X4 670 aa15.85■□□□□ 0.13
ERBB2-222ENST00000584908 B4E171 279 aa15.84■□□□□ 0.13
ERBB2-222ENST00000584908 BHMG1C9JSJ3 638 aaPredicted RBP15.84■□□□□ 0.13
ERBB2-222ENST00000584908 GOLGA8KD6RF30 607 aa15.84■□□□□ 0.13
ERBB2-222ENST00000584908 GOLGA8TH3BQL2 631 aa15.84■□□□□ 0.13
ERBB2-222ENST00000584908 PFDN6O15212 129 aa15.84■□□□□ 0.13
ERBB2-222ENST00000584908 CAPN5O15484 640 aaPredicted RBP15.84■□□□□ 0.13
ERBB2-222ENST00000584908 TTC4O95801 387 aa15.84■□□□□ 0.13
ERBB2-222ENST00000584908 TYRP1P17643 537 aa15.84■□□□□ 0.13
ERBB2-222ENST00000584908 PGAM1P18669 254 aa15.84■□□□□ 0.13
ERBB2-222ENST00000584908 MPSTP25325 297 aa15.84■□□□□ 0.13
ERBB2-222ENST00000584908 AOAHP28039 575 aa15.84■□□□□ 0.13
ERBB2-222ENST00000584908 CSTF2P33240 577 aaKnown RBP eCLIP15.84■□□□□ 0.13
ERBB2-222ENST00000584908 ETV5P41161 510 aa15.84■□□□□ 0.13
ERBB2-222ENST00000584908 TSPAN7P41732 249 aa15.84■□□□□ 0.13
ERBB2-222ENST00000584908 GFERP55789 205 aa15.84■□□□□ 0.13
ERBB2-222ENST00000584908 PCBP4P57723 403 aaKnown RBP15.84■□□□□ 0.13
ERBB2-222ENST00000584908 MSS51Q4VC12 460 aa15.84■□□□□ 0.13
ERBB2-222ENST00000584908 DNAJC21Q5F1R6 531 aaKnown RBP15.84■□□□□ 0.13
ERBB2-222ENST00000584908 FOXR1Q6PIV2 292 aa15.84■□□□□ 0.13
ERBB2-222ENST00000584908 CENPUQ71F23 418 aa15.84■□□□□ 0.13
ERBB2-222ENST00000584908 PRSS42Q7Z5A4 293 aa15.84■□□□□ 0.13
ERBB2-222ENST00000584908 SLC22A15Q8IZD6 547 aa15.84■□□□□ 0.13
ERBB2-222ENST00000584908 BMPERQ8N8U9 685 aa15.84■□□□□ 0.13
ERBB2-222ENST00000584908 ACVR1CQ8NER5 493 aa15.84■□□□□ 0.13
ERBB2-222ENST00000584908 LKAAEAR1Q8TD35 194 aa15.84■□□□□ 0.13
ERBB2-222ENST00000584908 ASZ1Q8WWH4 475 aa15.84■□□□□ 0.13
ERBB2-222ENST00000584908 TFGQ92734 400 aaPredicted RBP15.84■□□□□ 0.13
ERBB2-222ENST00000584908 C9orf72Q96LT7 481 aa15.84■□□□□ 0.13
ERBB2-222ENST00000584908 EBNA1BP2Q99848 306 aaKnown RBP15.84■□□□□ 0.13
ERBB2-222ENST00000584908 TFB2MQ9H5Q4 396 aaKnown RBP15.84■□□□□ 0.13
ERBB2-222ENST00000584908 INTS10Q9NVR2 710 aaKnown RBP15.84■□□□□ 0.13
ERBB2-222ENST00000584908 PISDQ9UG56 409 aa15.84■□□□□ 0.13
ERBB2-222ENST00000584908 VPS9D1Q9Y2B5 631 aa15.84■□□□□ 0.13
ERBB2-222ENST00000584908 MAD1L1Q9Y6D9 718 aa15.84■□□□□ 0.13
ERBB2-222ENST00000584908 PTPRQQ9UMZ3 2332 aa15.83■□□□□ 0.12
ERBB2-222ENST00000584908 OR5K3A6NET4 321 aa15.83■□□□□ 0.12
ERBB2-222ENST00000584908 FAM187AA6NFU0 413 aa15.83■□□□□ 0.12
ERBB2-222ENST00000584908 EFCAB8A8MWE9 144 aa15.83■□□□□ 0.12
ERBB2-222ENST00000584908 NDC80O14777 642 aa15.83■□□□□ 0.12
ERBB2-222ENST00000584908 SLCO2B1O94956 709 aa15.83■□□□□ 0.12
ERBB2-222ENST00000584908 ESR1P03372 595 aa15.83■□□□□ 0.12
ERBB2-222ENST00000584908 FGF3P11487 239 aaPredicted RBP15.83■□□□□ 0.12
ERBB2-222ENST00000584908 CCL4P13236 92 aa15.83■□□□□ 0.12
ERBB2-222ENST00000584908 ITIH1P19827 911 aa15.83■□□□□ 0.12
ERBB2-222ENST00000584908 ITGA8P53708 1063 aa15.83■□□□□ 0.12
ERBB2-222ENST00000584908 DHX9Q08211 1270 aaKnown RBP15.83■□□□□ 0.12
ERBB2-222ENST00000584908 LONRF1Q17RB8 773 aa15.83■□□□□ 0.12
ERBB2-222ENST00000584908 CTSL3PQ5NE16 218 aa15.83■□□□□ 0.12
ERBB2-222ENST00000584908 MAATS1Q7Z4T9 603 aa15.83■□□□□ 0.12
ERBB2-222ENST00000584908 PDIK1LQ8N165 341 aa15.83■□□□□ 0.12
ERBB2-222ENST00000584908 ZNF248Q8NDW4 579 aa15.83■□□□□ 0.12
ERBB2-222ENST00000584908 LRRC39Q96DD0 335 aa15.83■□□□□ 0.12
ERBB2-222ENST00000584908 ZDHHC12Q96GR4 267 aa15.83■□□□□ 0.12
ERBB2-222ENST00000584908 C16orf45Q96MC5 204 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms