RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 RBM12BQ8IXT5 1001 aaKnown RBP20.27■□□□□ 0.84
TOP3A-218ENST00000584669 C17orf53Q8N3J3 647 aaPredicted RBP20.27■□□□□ 0.84
TOP3A-218ENST00000584669 MPP5Q8N3R9 675 aa20.27■□□□□ 0.84
TOP3A-218ENST00000584669 GRK7Q8WTQ7 553 aa20.27■□□□□ 0.84
TOP3A-218ENST00000584669 RSC1A1Q92681 617 aa20.27■□□□□ 0.84
TOP3A-218ENST00000584669 MARCH4Q9P2E8 410 aaPredicted RBP20.27■□□□□ 0.84
TOP3A-218ENST00000584669 GOLGA8MH3BSY2 632 aa20.26■□□□□ 0.83
TOP3A-218ENST00000584669 AP2A2O94973 939 aa20.26■□□□□ 0.83
TOP3A-218ENST00000584669 FGF3P11487 239 aaPredicted RBP20.26■□□□□ 0.83
TOP3A-218ENST00000584669 CSTF2P33240 577 aaKnown RBP eCLIP20.26■□□□□ 0.83
TOP3A-218ENST00000584669 FASTKD1Q53R41 847 aaKnown RBP20.26■□□□□ 0.83
TOP3A-218ENST00000584669 LYPLAL1Q5VWZ2 237 aa20.26■□□□□ 0.83
TOP3A-218ENST00000584669 CAPRIN2Q6IMN6 1127 aaKnown RBP20.26■□□□□ 0.83
TOP3A-218ENST00000584669 CAND1Q86VP6 1230 aaKnown RBP20.26■□□□□ 0.83
TOP3A-218ENST00000584669 CREG2Q8IUH2 290 aa20.26■□□□□ 0.83
TOP3A-218ENST00000584669 MFSD3Q96ES6 412 aa20.26■□□□□ 0.83
TOP3A-218ENST00000584669 MED8Q96G25 268 aa20.26■□□□□ 0.83
TOP3A-218ENST00000584669 SGSM3Q96HU1 749 aa20.26■□□□□ 0.83
TOP3A-218ENST00000584669 KIFC1Q9BW19 673 aa20.26■□□□□ 0.83
TOP3A-218ENST00000584669 VPS37BQ9H9H4 285 aa20.26■□□□□ 0.83
TOP3A-218ENST00000584669 CATSPERZQ9NTU4 200 aa20.26■□□□□ 0.83
TOP3A-218ENST00000584669 OCIAD1Q9NX40 245 aa20.26■□□□□ 0.83
TOP3A-218ENST00000584669 MN1Q10571 1320 aaPredicted RBP20.26■□□□□ 0.83
TOP3A-218ENST00000584669 CD82P27701 267 aa20.25■□□□□ 0.83
TOP3A-218ENST00000584669 PDHA2P29803 388 aa20.25■□□□□ 0.83
TOP3A-218ENST00000584669 PREPP48147 710 aa20.25■□□□□ 0.83
TOP3A-218ENST00000584669 LEPRP48357 1165 aaKnown RBP20.25■□□□□ 0.83
TOP3A-218ENST00000584669 SARNPP82979 210 aaKnown RBP20.25■□□□□ 0.83
TOP3A-218ENST00000584669 PPP1R7Q15435 360 aa20.25■□□□□ 0.83
TOP3A-218ENST00000584669 NAPRTQ6XQN6 538 aa20.25■□□□□ 0.83
TOP3A-218ENST00000584669 CERS6Q6ZMG9 384 aa20.25■□□□□ 0.83
TOP3A-218ENST00000584669 ARHGAP22Q7Z5H3 698 aa20.25■□□□□ 0.83
TOP3A-218ENST00000584669 FAM129CQ86XR2 697 aa20.25■□□□□ 0.83
TOP3A-218ENST00000584669 PLXDC1Q8IUK5 500 aa20.25■□□□□ 0.83
TOP3A-218ENST00000584669 ZSCAN1Q8NBB4 408 aa20.25■□□□□ 0.83
TOP3A-218ENST00000584669 AGBL5Q8NDL9 886 aa20.25■□□□□ 0.83
TOP3A-218ENST00000584669 ART4Q93070 314 aa20.25■□□□□ 0.83
TOP3A-218ENST00000584669 PMEPA1Q969W9 287 aa20.25■□□□□ 0.83
TOP3A-218ENST00000584669 TGM7Q96PF1 710 aa20.25■□□□□ 0.83
TOP3A-218ENST00000584669 TAAR9Q96RI9 348 aa20.25■□□□□ 0.83
TOP3A-218ENST00000584669 ARHGAP9Q9BRR9 750 aa20.25■□□□□ 0.83
TOP3A-218ENST00000584669 TRIM56Q9BRZ2 755 aaKnown RBP20.25■□□□□ 0.83
TOP3A-218ENST00000584669 OR52A5Q9H2C5 316 aa20.25■□□□□ 0.83
TOP3A-218ENST00000584669 MRM3Q9HC36 420 aaKnown RBP20.25■□□□□ 0.83
TOP3A-218ENST00000584669 SOX13Q9UN79 622 aa20.25■□□□□ 0.83
TOP3A-218ENST00000584669 PCDHGA4Q9Y5G9 962 aa20.25■□□□□ 0.83
TOP3A-218ENST00000584669 SAR1BQ9Y6B6 198 aa20.25■□□□□ 0.83
TOP3A-218ENST00000584669 SPTA1P02549 2419 aa20.25■□□□□ 0.83
TOP3A-218ENST00000584669 ATMQ13315 3056 aa20.24■□□□□ 0.83
TOP3A-218ENST00000584669 CTAGE9A4FU28 777 aa20.24■□□□□ 0.83
TOP3A-218ENST00000584669 CD3EAPO15446 510 aaKnown RBP20.24■□□□□ 0.83
TOP3A-218ENST00000584669 C9P02748 559 aa20.24■□□□□ 0.83
TOP3A-218ENST00000584669 ARNTP27540 789 aa20.24■□□□□ 0.83
TOP3A-218ENST00000584669 BRD3Q15059 726 aa20.24■□□□□ 0.83
TOP3A-218ENST00000584669 MCUQ8NE86 351 aa20.24■□□□□ 0.83
TOP3A-218ENST00000584669 EXTL1Q92935 676 aa20.24■□□□□ 0.83
TOP3A-218ENST00000584669 TTC1Q99614 292 aa20.24■□□□□ 0.83
TOP3A-218ENST00000584669 SLC39A1Q9NY26 324 aa20.24■□□□□ 0.83
TOP3A-218ENST00000584669 ANAPC5Q9UJX4 755 aa20.24■□□□□ 0.83
TOP3A-218ENST00000584669 SNRNP200O75643 2136 aaKnown RBP20.24■□□□□ 0.83
TOP3A-218ENST00000584669 EFCAB7A8K855 629 aa20.23■□□□□ 0.83
TOP3A-218ENST00000584669 STMND1H3BQB6 276 aa20.23■□□□□ 0.83
TOP3A-218ENST00000584669 CAPN5O15484 640 aaPredicted RBP20.23■□□□□ 0.83
TOP3A-218ENST00000584669 FTH1P02794 183 aa20.23■□□□□ 0.83
TOP3A-218ENST00000584669 ITGB6P18564 788 aa20.23■□□□□ 0.83
TOP3A-218ENST00000584669 PTGIRP43119 386 aa20.23■□□□□ 0.83
TOP3A-218ENST00000584669 CAPZBP47756 277 aa20.23■□□□□ 0.83
TOP3A-218ENST00000584669 ATP1A2P50993 1020 aa20.23■□□□□ 0.83
TOP3A-218ENST00000584669 PPP1CAP62136 330 aa20.23■□□□□ 0.83
TOP3A-218ENST00000584669 PLCL1Q15111 1095 aa20.23■□□□□ 0.83
TOP3A-218ENST00000584669 CASC4Q6P4E1 433 aa20.23■□□□□ 0.83
TOP3A-218ENST00000584669 NAT8LQ8N9F0 302 aa20.23■□□□□ 0.83
TOP3A-218ENST00000584669 ELMO1Q92556 727 aa20.23■□□□□ 0.83
TOP3A-218ENST00000584669 C9orf72Q96LT7 481 aa20.23■□□□□ 0.83
TOP3A-218ENST00000584669 SERPINB12Q96P63 405 aa20.23■□□□□ 0.83
TOP3A-218ENST00000584669 PCYOX1Q9UHG3 505 aa20.23■□□□□ 0.83
TOP3A-218ENST00000584669 SLC24A2Q9UI40 661 aa20.23■□□□□ 0.83
TOP3A-218ENST00000584669 GOLGA8KD6RF30 607 aa20.22■□□□□ 0.83
TOP3A-218ENST00000584669 GOLGA8TH3BQL2 631 aa20.22■□□□□ 0.83
TOP3A-218ENST00000584669 J3QKU1 62 aa20.22■□□□□ 0.83
TOP3A-218ENST00000584669 KIF1CO43896 1103 aaKnown RBP20.22■□□□□ 0.83
TOP3A-218ENST00000584669 VAPBO95292 243 aa20.22■□□□□ 0.83
TOP3A-218ENST00000584669 GSTM1P09488 218 aa20.22■□□□□ 0.83
TOP3A-218ENST00000584669 OR56A5P0C7T3 313 aa20.22■□□□□ 0.83
TOP3A-218ENST00000584669 WT1P19544 449 aaPredicted RBP20.22■□□□□ 0.83
TOP3A-218ENST00000584669 GSTM4Q03013 218 aa20.22■□□□□ 0.83
TOP3A-218ENST00000584669 IRGCQ6NXR0 463 aa20.22■□□□□ 0.83
TOP3A-218ENST00000584669 DTX1Q86Y01 620 aa20.22■□□□□ 0.83
TOP3A-218ENST00000584669 KLHL7Q8IXQ5 586 aa20.22■□□□□ 0.83
TOP3A-218ENST00000584669 AGGF1Q8N302 714 aaeCLIP20.22■□□□□ 0.83
TOP3A-218ENST00000584669 BMPERQ8N8U9 685 aa20.22■□□□□ 0.83
TOP3A-218ENST00000584669 PHC3Q8NDX5 983 aa20.22■□□□□ 0.83
TOP3A-218ENST00000584669 LKAAEAR1Q8TD35 194 aa20.22■□□□□ 0.83
TOP3A-218ENST00000584669 FERD3LQ96RJ6 166 aa20.22■□□□□ 0.83
TOP3A-218ENST00000584669 B3GNT4Q9C0J1 378 aa20.22■□□□□ 0.83
TOP3A-218ENST00000584669 KIR3DX1Q9H7L2 352 aa20.22■□□□□ 0.83
TOP3A-218ENST00000584669 XAB2Q9HCS7 855 aaKnown RBP20.22■□□□□ 0.83
TOP3A-218ENST00000584669 ASIC3Q9UHC3 531 aa20.22■□□□□ 0.83
TOP3A-218ENST00000584669 B3GALT1Q9Y5Z6 326 aa20.22■□□□□ 0.83
TOP3A-218ENST00000584669 IQCF5A8MTL0 148 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms