RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 QSOX2Q6ZRP7 698 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 CDADC1Q9BWV3 514 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 SLC6A15Q9H2J7 730 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 TFB2MQ9H5Q4 396 aaKnown RBP12.87□□□□□ -0.35
RNF43-208ENST00000584437 OAZ3Q9UMX2 235 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 GABRDO14764 452 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 SNAPC5O75971 98 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 SLC2A2P11168 524 aaPredicted RBP12.87□□□□□ -0.35
RNF43-208ENST00000584437 CKMT2P17540 419 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 SLC15A1P46059 708 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 PAMR1Q6UXH9 720 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 NAT8LQ8N9F0 302 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 SPPL2BQ8TCT7 592 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 DCAKDQ8WVC6 231 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 STON2Q8WXE9 905 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 COPS5Q92905 334 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 KCTD7Q96MP8 289 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 RC3H2Q9HBD1 1191 aaKnown RBP12.87□□□□□ -0.35
RNF43-208ENST00000584437 ASAH2Q9NR71 780 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 COMMD3Q9UBI1 195 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 PMM2O15305 246 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 SCGNO76038 276 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 XRCC1P18887 633 aaPredicted RBP12.87□□□□□ -0.35
RNF43-208ENST00000584437 PTGER3P43115 390 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 GNA12Q03113 381 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 SPATS1Q496A3 300 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 PITRM1Q5JRX3 1037 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 FAM91A1Q658Y4 838 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 ACOT12Q8WYK0 555 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 GPER1Q99527 375 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 FTHL17Q9BXU8 183 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 ERCC6L2Q5T890 1561 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 DNAJA1P31689 397 aaKnown RBP12.87□□□□□ -0.35
RNF43-208ENST00000584437 TPRG1LQ5T0D9 272 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 GPR153Q6NV75 609 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 RANBP3LQ86VV4 465 aaPredicted RBP12.87□□□□□ -0.35
RNF43-208ENST00000584437 ZNF420Q8TAQ5 688 aaPredicted RBP12.87□□□□□ -0.35
RNF43-208ENST00000584437 CANT1Q8WVQ1 401 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 FATE1Q969F0 183 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 CLIP3Q96DZ5 547 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 PIWIL1Q96J94 861 aaKnown RBP12.87□□□□□ -0.35
RNF43-208ENST00000584437 ITPAQ9BY32 194 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 IKZF4Q9H2S9 585 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 DMAC2Q9NW81 257 aa12.87□□□□□ -0.35
RNF43-208ENST00000584437 SLC15A5A6NIM6 579 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 GIMD1P0DJR0 217 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 IMPDH1P20839 514 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 HTR1BP28222 390 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 GLUD2P49448 558 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 NDST2P52849 883 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 NAE1Q13564 534 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 HNRNPDQ14103 355 aaKnown RBP12.86□□□□□ -0.35
RNF43-208ENST00000584437 ZNF234Q14588 700 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 SERPINA13PQ6UXR4 307 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 ENDOVQ8N8Q3 282 aaKnown RBP12.86□□□□□ -0.35
RNF43-208ENST00000584437 TMIEQ8NEW7 156 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 ZNF563Q8TA94 476 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 SLC35B2Q8TB61 432 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 C15orf40Q8WUR7 153 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 AKT1S1Q96B36 256 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 ZC3H10Q96K80 434 aaKnown RBP12.86□□□□□ -0.35
RNF43-208ENST00000584437 COMMD4Q9H0A8 199 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 PREBQ9HCU5 417 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 EIF2B4Q9UI10 523 aaKnown RBP12.86□□□□□ -0.35
RNF43-208ENST00000584437 OR6C70A6NIJ9 312 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 ARPC2O15144 300 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 CLPXO76031 633 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 FMO3P31513 532 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 RBM34P42696 430 aaKnown RBP12.86□□□□□ -0.35
RNF43-208ENST00000584437 DNASE1L1P49184 302 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 MTPNP58546 118 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 TRMT10BQ6PF06 316 aaKnown RBP12.86□□□□□ -0.35
RNF43-208ENST00000584437 ZNF517Q6ZMY9 492 aaPredicted RBP12.86□□□□□ -0.35
RNF43-208ENST00000584437 NEK7Q8TDX7 302 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 DNAJA4Q8WW22 397 aaPredicted RBP12.86□□□□□ -0.35
RNF43-208ENST00000584437 PIGKQ92643 395 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 ABCG2Q9UNQ0 655 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 CNTNAP1P78357 1384 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 TMEM63AO94886 807 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 GOT2P00505 430 aaKnown RBP12.86□□□□□ -0.35
RNF43-208ENST00000584437 CST3P01034 146 aaPredicted RBP12.86□□□□□ -0.35
RNF43-208ENST00000584437 C8GP07360 202 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 SNHG28P0DPA3 235 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 UNGP13051 313 aaPredicted RBP12.86□□□□□ -0.35
RNF43-208ENST00000584437 EPHX2P34913 555 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 ADAM8P78325 824 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 CHIT1Q13231 466 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 ATP13A5Q4VNC0 1218 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 IDNKQ5T6J7 187 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 PLCZ1Q86YW0 608 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 ZNF558Q96NG5 402 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 TUBA1CQ9BQE3 449 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 ACAT2Q9BWD1 397 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 MEMO1Q9Y316 297 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 NOTOA8MTQ0 251 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 GATBO75879 557 aaKnown RBP12.86□□□□□ -0.35
RNF43-208ENST00000584437 ARCN1P48444 511 aaKnown RBP12.86□□□□□ -0.35
RNF43-208ENST00000584437 MAPK12P53778 367 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 HERVK_113P63132 956 aa12.86□□□□□ -0.35
RNF43-208ENST00000584437 DSC2Q02487 901 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms