RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	UGT8	Q16880	541 aa		11.32	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	BCL7A	Q4VC05	210 aa		11.32	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	TMTC4	Q5T4D3	741 aa		11.32	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	DARS2	Q6PI48	645 aa	Known RBP	11.32	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	RANBP10	Q6VN20	620 aa		11.32	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	KMT5C	Q86Y97	462 aa		11.32	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	CDKL3	Q8IVW4	592 aa	Predicted RBP	11.32	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	ZNF501	Q96CX3	271 aa	Predicted RBP	11.32	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	FCRL4	Q96PJ5	515 aa		11.32	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	FERD3L	Q96RJ6	166 aa		11.32	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	TBL1Y	Q9BQ87	522 aa		11.32	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	CHST8	Q9H2A9	424 aa		11.32	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	KCND1	Q9NSA2	647 aa		11.32	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	FARSA	Q9Y285	508 aa	Known RBP	11.32	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	COLEC10	Q9Y6Z7	277 aa		11.32	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	RCCD1	A6NED2	376 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	TMEM150C	B9EJG8	249 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	PJA2	O43164	708 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	RBP3	P10745	1247 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	RALB	P11234	206 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	ATP1B2	P14415	290 aa	Predicted RBP	11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	PVR	P15151	417 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	ITGAL	P20701	1170 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	PTGIR	P43119	386 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	UQCRFS1	P47985	274 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	LMAN1	P49257	510 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	PRLHR	P49683	370 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	ZNF140	P52738	457 aa	Predicted RBP	11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	PRKAA1	Q13131	559 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	PRKG2	Q13237	762 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	LAMB3	Q13751	1172 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	NADK2	Q4G0N4	442 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	ZRANB3	Q5FWF4	1079 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	CAPRIN2	Q6IMN6	1127 aa	Known RBP	11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	SYVN1	Q86TM6	617 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	BPHL	Q86WA6	291 aa	Predicted RBP	11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	NXPE1	Q8N323	547 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	ENDOV	Q8N8Q3	282 aa	Known RBP	11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	PHC3	Q8NDX5	983 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	HM13	Q8TCT9	377 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	LCN9	Q8WX39	176 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	CLIP3	Q96DZ5	547 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	DNAJC1	Q96KC8	554 aa	Known RBP	11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	COPS8	Q99627	209 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	HGH1	Q9BTY7	390 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	SLC25A23	Q9BV35	468 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	GPR87	Q9BY21	358 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	OSBPL8	Q9BZF1	889 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	TRIM5	Q9C035	493 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	ING2	Q9H160	280 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	SRMS	Q9H3Y6	488 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	XKR8	Q9H6D3	395 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	FANCE	Q9HB96	536 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	ACSS2	Q9NR19	701 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	PIH1D1	Q9NWS0	290 aa	Known RBP	11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	LUZP4	Q9P127	313 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	POMT2	Q9UKY4	750 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	SNX7	Q9UNH6	387 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	AAR2	Q9Y312	384 aa	Known RBP	11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	DUSP10	Q9Y6W6	482 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	NAV2	Q8IVL1	2488 aa		11.31	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	SPTB	P11277	2137 aa		11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	CCDC78	A2IDD5	438 aa		11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	BLACE	A4D250	179 aa		11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	SOWAHD	A6NJG2	315 aa		11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	TTLL8	A6PVC2	850 aa		11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	CFAP99	D6REC4	459 aa		11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	MEN1	O00255	615 aa		11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	BTN3A3	O00478	584 aa		11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	BTN3A1	O00481	513 aa		11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	STK10	O94804	968 aa	Known RBP	11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	CRTAM	O95727	393 aa		11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	KLK3	P07288	261 aa	Predicted RBP	11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	ST6GAL1	P15907	406 aa		11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	TPH1	P17752	444 aa		11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	CYP2A7	P20853	494 aa		11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	NDUFS1	P28331	727 aa		11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	PDHA2	P29803	388 aa		11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	MC4R	P32245	332 aa		11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	CTNNA1	P35221	906 aa	Known RBP	11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	PREP	P48147	710 aa		11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	PGD	P52209	483 aa		11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	MSLN	Q13421	630 aa	Predicted RBP	11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	SKOR2	Q2VWA4	1001 aa	Predicted RBP	11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	PTCHD3	Q3KNS1	767 aa		11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	PLEKHS1	Q5SXH7	462 aa		11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	DENND5A	Q6IQ26	1287 aa		11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	TAS2R42	Q7RTR8	314 aa		11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	SNX20	Q7Z614	316 aa		11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	ATCAY	Q86WG3	371 aa		11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	APLF	Q8IW19	511 aa	Predicted RBP	11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	FAM26E	Q8N5C1	309 aa		11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	TAB3	Q8N5C8	712 aa	Predicted RBP	11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	ACVR1C	Q8NER5	493 aa		11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	OR1L3	Q8NH93	324 aa		11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	ZFPM2	Q8WW38	1151 aa		11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	THAP4	Q8WY91	577 aa		11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	ULK4	Q96C45	1275 aa		11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	LINC00615	Q96LM1	132 aa	Predicted RBP	11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	SPATA13	Q96N96	652 aa		11.3	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms