RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 NHLH1Q02575 133 aa13.99□□□□□ -0.17
SKA2-205ENST00000580541 ZNF844Q08AG5 666 aa13.99□□□□□ -0.17
SKA2-205ENST00000580541 BNIP3Q12983 259 aa13.99□□□□□ -0.17
SKA2-205ENST00000580541 BIRC2Q13490 618 aa13.99□□□□□ -0.17
SKA2-205ENST00000580541 ZKSCAN8Q15776 578 aaPredicted RBP13.99□□□□□ -0.17
SKA2-205ENST00000580541 FAM83EQ2M2I3 478 aa13.99□□□□□ -0.17
SKA2-205ENST00000580541 KLC3Q6P597 504 aa13.99□□□□□ -0.17
SKA2-205ENST00000580541 PAQR3Q6TCH7 311 aa13.99□□□□□ -0.17
SKA2-205ENST00000580541 SLC22A15Q8IZD6 547 aa13.99□□□□□ -0.17
SKA2-205ENST00000580541 CD200R1Q8TD46 325 aa13.99□□□□□ -0.17
SKA2-205ENST00000580541 SAP25Q8TEE9 199 aa13.99□□□□□ -0.17
SKA2-205ENST00000580541 ZFPM2Q8WW38 1151 aa13.99□□□□□ -0.17
SKA2-205ENST00000580541 FAM136AQ96C01 138 aa13.99□□□□□ -0.17
SKA2-205ENST00000580541 TRIM54Q9BYV2 358 aa13.99□□□□□ -0.17
SKA2-205ENST00000580541 NMRAL1Q9HBL8 299 aa13.99□□□□□ -0.17
SKA2-205ENST00000580541 SNX15Q9NRS6 342 aa13.99□□□□□ -0.17
SKA2-205ENST00000580541 LGALS13Q9UHV8 139 aa13.99□□□□□ -0.17
SKA2-205ENST00000580541 ZFC3H1O60293 1989 aaKnown RBP13.99□□□□□ -0.17
SKA2-205ENST00000580541 A0A096LPK6 155 aa13.98□□□□□ -0.17
SKA2-205ENST00000580541 ZBTB14O43829 449 aa13.98□□□□□ -0.17
SKA2-205ENST00000580541 SDC3O75056 442 aa13.98□□□□□ -0.17
SKA2-205ENST00000580541 F7P08709 466 aaPredicted RBP13.98□□□□□ -0.17
SKA2-205ENST00000580541 RPL10P27635 214 aaKnown RBP13.98□□□□□ -0.17
SKA2-205ENST00000580541 CCNFP41002 786 aa13.98□□□□□ -0.17
SKA2-205ENST00000580541 CCT5P48643 541 aa13.98□□□□□ -0.17
SKA2-205ENST00000580541 ATP6V0D1P61421 351 aa13.98□□□□□ -0.17
SKA2-205ENST00000580541 BMPR2Q13873 1038 aa13.98□□□□□ -0.17
SKA2-205ENST00000580541 KCTD16Q68DU8 428 aa13.98□□□□□ -0.17
SKA2-205ENST00000580541 IYDQ6PHW0 289 aa13.98□□□□□ -0.17
SKA2-205ENST00000580541 UNC5DQ6UXZ4 953 aa13.98□□□□□ -0.17
SKA2-205ENST00000580541 PRR23CQ6ZRP0 262 aa13.98□□□□□ -0.17
SKA2-205ENST00000580541 SLC9B2Q86UD5 537 aa13.98□□□□□ -0.17
SKA2-205ENST00000580541 NRROSQ86YC3 692 aa13.98□□□□□ -0.17
SKA2-205ENST00000580541 TRIM48Q8IWZ4 208 aa13.98□□□□□ -0.17
SKA2-205ENST00000580541 RBM12BQ8IXT5 1001 aaKnown RBP13.98□□□□□ -0.17
SKA2-205ENST00000580541 OR6C4Q8NGE1 309 aa13.98□□□□□ -0.17
SKA2-205ENST00000580541 ZDHHC1Q8WTX9 485 aa13.98□□□□□ -0.17
SKA2-205ENST00000580541 NAT14Q8WUY8 206 aa13.98□□□□□ -0.17
SKA2-205ENST00000580541 TFGQ92734 400 aaPredicted RBP13.98□□□□□ -0.17
SKA2-205ENST00000580541 ISL2Q96A47 359 aa13.98□□□□□ -0.17
SKA2-205ENST00000580541 SH3KBP1Q96B97 665 aa13.98□□□□□ -0.17
SKA2-205ENST00000580541 PGM2Q96G03 612 aa13.98□□□□□ -0.17
SKA2-205ENST00000580541 OLFM1Q99784 485 aa13.98□□□□□ -0.17
SKA2-205ENST00000580541 EDEM2Q9BV94 578 aa13.98□□□□□ -0.17
SKA2-205ENST00000580541 CENPHQ9H3R5 247 aa13.98□□□□□ -0.17
SKA2-205ENST00000580541 SMOC1Q9H4F8 434 aa13.98□□□□□ -0.17
SKA2-205ENST00000580541 CAB39LQ9H9S4 337 aa13.98□□□□□ -0.17
SKA2-205ENST00000580541 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.98□□□□□ -0.17
SKA2-205ENST00000580541 GULP1Q9UBP9 304 aa13.98□□□□□ -0.17
SKA2-205ENST00000580541 TBC1D29Q9UFV1 150 aa13.98□□□□□ -0.17
SKA2-205ENST00000580541 DCDC2Q9UHG0 476 aa13.98□□□□□ -0.17
SKA2-205ENST00000580541 POLG2Q9UHN1 485 aa13.98□□□□□ -0.17
SKA2-205ENST00000580541 MED16Q9Y2X0 877 aa13.98□□□□□ -0.17
SKA2-205ENST00000580541 PLEKHM1Q9Y4G2 1056 aa13.98□□□□□ -0.17
SKA2-205ENST00000580541 PCYT1BQ9Y5K3 369 aaPredicted RBP13.98□□□□□ -0.17
SKA2-205ENST00000580541 ARHGEF17Q96PE2 2063 aaPredicted RBP13.98□□□□□ -0.17
SKA2-205ENST00000580541 TP53BP1Q12888 1972 aaPredicted RBP13.98□□□□□ -0.17
SKA2-205ENST00000580541 LRP4O75096 1905 aa13.98□□□□□ -0.17
SKA2-205ENST00000580541 ADAMTS9Q9P2N4 1935 aa13.98□□□□□ -0.17
SKA2-205ENST00000580541 HMX2A2RU54 273 aa13.97□□□□□ -0.17
SKA2-205ENST00000580541 PRR19A6NJB7 356 aa13.97□□□□□ -0.17
SKA2-205ENST00000580541 SLC16A5O15375 505 aa13.97□□□□□ -0.17
SKA2-205ENST00000580541 FLRT2O43155 660 aa13.97□□□□□ -0.17
SKA2-205ENST00000580541 ALDOAP04075 364 aaKnown RBP13.97□□□□□ -0.17
SKA2-205ENST00000580541 C2P06681 752 aa13.97□□□□□ -0.17
SKA2-205ENST00000580541 C8GP07360 202 aa13.97□□□□□ -0.17
SKA2-205ENST00000580541 LTA4HP09960 611 aaKnown RBP13.97□□□□□ -0.17
SKA2-205ENST00000580541 HIST1H2AGP0C0S8 130 aaPredicted RBP13.97□□□□□ -0.17
SKA2-205ENST00000580541 CCDC166P0CW27 439 aa13.97□□□□□ -0.17
SKA2-205ENST00000580541 ZNF37AP17032 561 aaPredicted RBP13.97□□□□□ -0.17
SKA2-205ENST00000580541 XRCC1P18887 633 aaPredicted RBP13.97□□□□□ -0.17
SKA2-205ENST00000580541 HIST1H2ADP20671 130 aa13.97□□□□□ -0.17
SKA2-205ENST00000580541 MAP4P27816 1152 aaKnown RBP13.97□□□□□ -0.17
SKA2-205ENST00000580541 GRK6P43250 576 aa13.97□□□□□ -0.17
SKA2-205ENST00000580541 GPS2Q13227 327 aa13.97□□□□□ -0.17
SKA2-205ENST00000580541 GBX1Q14549 363 aa13.97□□□□□ -0.17
SKA2-205ENST00000580541 SF3A2Q15428 464 aaKnown RBP13.97□□□□□ -0.17
SKA2-205ENST00000580541 SHBQ15464 509 aa13.97□□□□□ -0.17
SKA2-205ENST00000580541 TSNAXIP1Q2TAA8 658 aa13.97□□□□□ -0.17
SKA2-205ENST00000580541 ZNF658BQ4V348 819 aaPredicted RBP13.97□□□□□ -0.17
SKA2-205ENST00000580541 ACSBG2Q5FVE4 666 aa13.97□□□□□ -0.17
SKA2-205ENST00000580541 C6orf132Q5T0Z8 1188 aa13.97□□□□□ -0.17
SKA2-205ENST00000580541 CAPRIN2Q6IMN6 1127 aaKnown RBP13.97□□□□□ -0.17
SKA2-205ENST00000580541 TCEAL6Q6IPX3 200 aa13.97□□□□□ -0.17
SKA2-205ENST00000580541 ZCCHC8Q6NZY4 707 aaKnown RBP13.97□□□□□ -0.17
SKA2-205ENST00000580541 OGFOD3Q6PK18 319 aa13.97□□□□□ -0.17
SKA2-205ENST00000580541 PDZD3Q86UT5 571 aa13.97□□□□□ -0.17
SKA2-205ENST00000580541 CEP97Q8IW35 865 aa13.97□□□□□ -0.17
SKA2-205ENST00000580541 CPNE9Q8IYJ1 553 aa13.97□□□□□ -0.17
SKA2-205ENST00000580541 SLC25A45Q8N413 288 aa13.97□□□□□ -0.17
SKA2-205ENST00000580541 RAB42Q8N4Z0 105 aa13.97□□□□□ -0.17
SKA2-205ENST00000580541 PHC3Q8NDX5 983 aa13.97□□□□□ -0.17
SKA2-205ENST00000580541 CCL4L1Q8NHW4 92 aa13.97□□□□□ -0.17
SKA2-205ENST00000580541 MAPK15Q8TD08 544 aa13.97□□□□□ -0.17
SKA2-205ENST00000580541 LKAAEAR1Q8TD35 194 aa13.97□□□□□ -0.17
SKA2-205ENST00000580541 EEF1AKMT1Q8WVE0 214 aa13.97□□□□□ -0.17
SKA2-205ENST00000580541 TCEAL3Q969E4 200 aa13.97□□□□□ -0.17
SKA2-205ENST00000580541 ALKBH8Q96BT7 664 aaKnown RBP13.97□□□□□ -0.17
SKA2-205ENST00000580541 CXorf40BQ96DE9 158 aa13.97□□□□□ -0.17
SKA2-205ENST00000580541 LINGO1Q96FE5 620 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms