RNA–Protein interactions for RNA: ENST00000579969.1

SNORD53-201, Transcript of small nucleolar RNA, C/D box 53, humanhuman

BASIC

Gene SNORD53, Length 78 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD53-201ENST00000579969 SRGAP2O75044 1071 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 DNAJC6O75061 913 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 PMPCBO75439 489 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 KLHL18O94889 574 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 TOXO94900 526 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 RHOBTB3O94955 611 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 ATE1O95260 518 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 RASAL1O95294 804 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 VIPP01282 170 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 JCHAINP01591 159 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 RAF1P04049 648 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 EBLN1P0CF75 366 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 PNMA6AP0CW24 399 aaPredicted RBP2.36□□□□□ -2.03
SNORD53-201ENST00000579969 PYGMP11217 842 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 ALOX15P16050 662 aaPredicted RBP2.36□□□□□ -2.03
SNORD53-201ENST00000579969 XRCC1P18887 633 aaPredicted RBP2.36□□□□□ -2.03
SNORD53-201ENST00000579969 KRT4P19013 534 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 ENPP1P22413 925 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 GRK2P25098 689 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 MSX1P28360 303 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 HNRNPH1P31943 449 aaKnown RBP2.36□□□□□ -2.03
SNORD53-201ENST00000579969 ACVRL1P37023 503 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 CETN2P41208 172 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 ARHGAP25P42331 645 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 GCLMP48507 274 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 LMAN1P49257 510 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 ARL4DP49703 201 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 MXI1P50539 228 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 CLCN2P51788 898 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 GEMIN4P57678 1058 aaKnown RBP2.36□□□□□ -2.03
SNORD53-201ENST00000579969 ETF1P62495 437 aaKnown RBP2.36□□□□□ -2.03
SNORD53-201ENST00000579969 YWHAZP63104 245 aaKnown RBP2.36□□□□□ -2.03
SNORD53-201ENST00000579969 CCZ1BP86790 482 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 CCZ1P86791 482 aaPredicted RBP2.36□□□□□ -2.03
SNORD53-201ENST00000579969 CDK3Q00526 305 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 PLIN5Q00G26 463 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 AMPD3Q01432 767 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 GNA12Q03113 381 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 TFF3Q07654 80 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 PPIDQ08752 370 aaKnown RBP2.36□□□□□ -2.03
SNORD53-201ENST00000579969 IFFO1Q0D2I5 559 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 FAPQ12884 760 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 BNIP1Q12981 228 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 LRP8Q14114 963 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 ACOX1Q15067 660 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 NCF4Q15080 339 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 PLCL1Q15111 1095 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 PPP1R7Q15435 360 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 TAF5Q15542 800 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 CNGA2Q16280 664 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 CYP2A13Q16696 494 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 KNOP1Q1ED39 458 aaKnown RBP2.36□□□□□ -2.03
SNORD53-201ENST00000579969 ERCC6LQ2NKX8 1250 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 PLA2G4EQ3MJ16 856 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 TUBB8Q3ZCM7 444 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 CCDC153Q494R4 210 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 CCDC14Q49A88 953 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 CCDC40Q4G0X9 1142 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 PYCR3Q53H96 274 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 KRTCAP3Q53RY4 240 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 ZC3H12BQ5HYM0 836 aaKnown RBP2.36□□□□□ -2.03
SNORD53-201ENST00000579969 CEP78Q5JTW2 689 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 CFAP157Q5JU67 520 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 C1orf220Q5T0J3 134 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 GKAP1Q5VSY0 366 aaPredicted RBP2.36□□□□□ -2.03
SNORD53-201ENST00000579969 MLIPQ5VWP3 458 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 ARMC3Q5W041 872 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 AFMIDQ63HM1 303 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 TUBA3EQ6PEY2 450 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 DOK6Q6PKX4 331 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 ANGPTL8Q6UXH0 198 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 CCBE1Q6UXH8 406 aaPredicted RBP2.36□□□□□ -2.03
SNORD53-201ENST00000579969 ISLR2Q6UXK2 745 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 CERS6Q6ZMG9 384 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 ZNF783Q6ZMS7 281 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 Q6ZPB1 254 aaPredicted RBP2.36□□□□□ -2.03
SNORD53-201ENST00000579969 MARK2Q7KZI7 788 aaKnown RBP2.36□□□□□ -2.03
SNORD53-201ENST00000579969 EPM2AIP1Q7L775 607 aaPredicted RBP2.36□□□□□ -2.03
SNORD53-201ENST00000579969 PRSS42Q7Z5A4 293 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 MRGPREQ86SM8 312 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 PHLDB2Q86SQ0 1253 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 ZNF354CQ86Y25 554 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 DOLPP1Q86YN1 238 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 KRTAP1-3Q8IUG1 177 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 C12orf56Q8IXR9 622 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 SYTL1Q8IYJ3 562 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 SLC7A5P1Q8MH63 180 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 CLYBLQ8N0X4 340 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 LZTR1Q8N653 840 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 TEX9Q8N6V9 391 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 TRIML2Q8N7C3 387 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 ZBTB8BQ8NAP8 495 aaPredicted RBP2.36□□□□□ -2.03
SNORD53-201ENST00000579969 NETO2Q8NC67 525 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 KIAA0895Q8NCT3 520 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 NEK11Q8NG66 645 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 PPP1R14CQ8TAE6 165 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 AGAP11Q8TF27 550 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 PHF10Q8WUB8 498 aaKnown RBP2.36□□□□□ -2.03
SNORD53-201ENST00000579969 CPLX3Q8WVH0 158 aa2.36□□□□□ -2.03
SNORD53-201ENST00000579969 ASB5Q8WWX0 329 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms