RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 NSUN5Q96P11 429 aaKnown RBP10.92□□□□□ -0.66
SKA2-204ENST00000578519 ZBTB18Q99592 522 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 TACO1Q9BSH4 297 aaKnown RBP10.92□□□□□ -0.66
SKA2-204ENST00000578519 TMEM245Q9H330 911 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 WDR41Q9HAD4 459 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 HPS4Q9NQG7 708 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 ZIM2Q9NZV7 527 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 STX18Q9P2W9 335 aaKnown RBP10.92□□□□□ -0.66
SKA2-204ENST00000578519 SLC7A8Q9UHI5 535 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 CD84Q9UIB8 345 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 CROTQ9UKG9 612 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 SNX6Q9UNH7 406 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 EIF3LQ9Y262 564 aaKnown RBP10.92□□□□□ -0.66
SKA2-204ENST00000578519 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.92□□□□□ -0.66
SKA2-204ENST00000578519 NUP210Q8TEM1 1887 aaPredicted RBP10.91□□□□□ -0.66
SKA2-204ENST00000578519 C17orf113A0A1B0GUU1 675 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 GRXCR2A6NFK2 248 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 LRRC14BA6NHZ5 514 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 MEI4A8MW99 385 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 TRIM38O00635 465 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 MRASO14807 208 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 LIN7AO14910 233 aaPredicted RBP10.91□□□□□ -0.66
SKA2-204ENST00000578519 CFLARO15519 480 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 TSPAN6O43657 245 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 AP1G1O43747 822 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 ULK1O75385 1050 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 OR4F21O95013 312 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 CLDN9O95484 217 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 ANP32DO95626 131 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 ADH1BP00325 375 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 NPPAP01160 153 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 EPHX1P07099 455 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 ADRB3P13945 408 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 MAPK1P28482 360 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 GJA4P35212 333 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 HSPA7P48741 367 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 AGTR2P50052 363 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 SEMG2Q02383 582 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 CREB5Q02930 508 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 EMX2Q04743 252 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 DPTQ07507 201 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 FOXM1Q08050 763 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 RALGDSQ12967 914 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 ADAM15Q13444 863 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 BOP1Q14137 746 aaKnown RBP10.91□□□□□ -0.66
SKA2-204ENST00000578519 PTK2BQ14289 1009 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 IMPG1Q17R60 797 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 BCL7AQ4VC05 210 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 KHDC1Q4VXA5 237 aaKnown RBP10.91□□□□□ -0.66
SKA2-204ENST00000578519 PDCD4Q53EL6 469 aaKnown RBP10.91□□□□□ -0.66
SKA2-204ENST00000578519 IL27RAQ6UWB1 636 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 PRR23BQ6ZRT6 265 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 RIPOR1Q6ZS17 1223 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 RPS27LQ71UM5 84 aaKnown RBP10.91□□□□□ -0.66
SKA2-204ENST00000578519 DET1Q7L5Y6 550 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 TRMT11Q7Z4G4 463 aaKnown RBP10.91□□□□□ -0.66
SKA2-204ENST00000578519 CDYL2Q8N8U2 506 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 LKAAEAR1Q8TD35 194 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 KCNV2Q8TDN2 545 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 DLG3Q92796 817 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 SCAMP4Q969E2 229 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 NXPE3Q969Y0 559 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 VOPP1Q96AW1 172 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 FBXL8Q96CD0 374 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 ZFYVE19Q96K21 471 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 CCDC138Q96M89 665 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 CDRT15Q96T59 188 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 CCDC167Q9P0B6 97 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 IKZF3Q9UKT9 509 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 DNMT3AQ9Y6K1 912 aaPredicted RBP10.91□□□□□ -0.66
SKA2-204ENST00000578519 ALPK3Q96L96 1907 aa10.91□□□□□ -0.66
SKA2-204ENST00000578519 C15orf38-AP3S2A0A0A6YYH1 394 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 GFYI3L273 518 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 AREL1O15033 823 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 GPR39O43194 453 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 UGDHO60701 494 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 ENTPD5O75356 428 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 SLCO2B1O94956 709 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 JUNP05412 331 aaKnown RBP10.9□□□□□ -0.66
SKA2-204ENST00000578519 CAPN1P07384 714 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 LAMP2P13473 410 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 GPX3P22352 226 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 FCARP24071 287 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 GDI1P31150 447 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 VHLP40337 213 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 PRLHRP49683 370 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 PNLIPRP1P54315 467 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 ERVPABLB-1P60509 514 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 PSME3P61289 254 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 B4GALNT1Q00973 533 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 HYAL1Q12794 435 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 TRAP1Q12931 704 aaKnown RBP10.9□□□□□ -0.66
SKA2-204ENST00000578519 MAP7Q14244 749 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 RCN1Q15293 331 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 XKR7Q5GH72 579 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 SAMD4BQ5PRF9 694 aaKnown RBP10.9□□□□□ -0.66
SKA2-204ENST00000578519 CACHD1Q5VU97 1274 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 RAET1GQ6H3X3 334 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 SYCE2Q6PIF2 218 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 TMEM220Q6QAJ8 160 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms