RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 TIAL1Q01085 375 aaKnown RBP eCLIP13.57□□□□□ -0.24
LINC01543-201ENST00000578367 IL9RQ01113 521 aa13.57□□□□□ -0.24
LINC01543-201ENST00000578367 IFFO1Q0D2I5 559 aa13.57□□□□□ -0.24
LINC01543-201ENST00000578367 BOP1Q14137 746 aaKnown RBP13.57□□□□□ -0.24
LINC01543-201ENST00000578367 EFTUD2Q15029 972 aaKnown RBP eCLIP13.57□□□□□ -0.24
LINC01543-201ENST00000578367 DEFB133Q30KQ1 61 aa13.57□□□□□ -0.24
LINC01543-201ENST00000578367 C14orf28Q4W4Y0 310 aa13.57□□□□□ -0.24
LINC01543-201ENST00000578367 UBAP2Q5T6F2 1119 aaKnown RBP13.57□□□□□ -0.24
LINC01543-201ENST00000578367 XKR5Q6UX68 686 aa13.57□□□□□ -0.24
LINC01543-201ENST00000578367 FAM83HQ6ZRV2 1179 aaPredicted RBP13.57□□□□□ -0.24
LINC01543-201ENST00000578367 PIP4P1Q86T03 277 aa13.57□□□□□ -0.24
LINC01543-201ENST00000578367 LCA5Q86VQ0 697 aa13.57□□□□□ -0.24
LINC01543-201ENST00000578367 GATAD2AQ86YP4 633 aa13.57□□□□□ -0.24
LINC01543-201ENST00000578367 IQCKQ8N0W5 287 aa13.57□□□□□ -0.24
LINC01543-201ENST00000578367 KRT222Q8N1A0 295 aa13.57□□□□□ -0.24
LINC01543-201ENST00000578367 PHC3Q8NDX5 983 aa13.57□□□□□ -0.24
LINC01543-201ENST00000578367 MAPK15Q8TD08 544 aa13.57□□□□□ -0.24
LINC01543-201ENST00000578367 LKAAEAR1Q8TD35 194 aa13.57□□□□□ -0.24
LINC01543-201ENST00000578367 MAGEC3Q8TD91 643 aa13.57□□□□□ -0.24
LINC01543-201ENST00000578367 NAT6Q93015 286 aa13.57□□□□□ -0.24
LINC01543-201ENST00000578367 CABS1Q96KC9 395 aa13.57□□□□□ -0.24
LINC01543-201ENST00000578367 NDNQ99608 321 aa13.57□□□□□ -0.24
LINC01543-201ENST00000578367 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.57□□□□□ -0.24
LINC01543-201ENST00000578367 MVB12BQ9H7P6 319 aa13.57□□□□□ -0.24
LINC01543-201ENST00000578367 PRDM8Q9NQV8 689 aa13.57□□□□□ -0.24
LINC01543-201ENST00000578367 POLG2Q9UHN1 485 aa13.57□□□□□ -0.24
LINC01543-201ENST00000578367 RAPGEFL1Q9UHV5 662 aa13.57□□□□□ -0.24
LINC01543-201ENST00000578367 SLC39A10Q9ULF5 831 aa13.57□□□□□ -0.24
LINC01543-201ENST00000578367 PLEKHM1Q9Y4G2 1056 aa13.57□□□□□ -0.24
LINC01543-201ENST00000578367 RIF1Q5UIP0 2472 aaKnown RBP13.57□□□□□ -0.24
LINC01543-201ENST00000578367 TRIM38O00635 465 aa13.56□□□□□ -0.24
LINC01543-201ENST00000578367 RASGRF2O14827 1237 aa13.56□□□□□ -0.24
LINC01543-201ENST00000578367 SLC16A5O15375 505 aa13.56□□□□□ -0.24
LINC01543-201ENST00000578367 NUDT21O43809 227 aaKnown RBP13.56□□□□□ -0.24
LINC01543-201ENST00000578367 NOBOXO60393 691 aa13.56□□□□□ -0.24
LINC01543-201ENST00000578367 SNX2O60749 519 aa13.56□□□□□ -0.24
LINC01543-201ENST00000578367 PIAS1O75925 651 aa13.56□□□□□ -0.24
LINC01543-201ENST00000578367 FAM155BO75949 473 aa13.56□□□□□ -0.24
LINC01543-201ENST00000578367 CELA2BP08218 269 aaPredicted RBP13.56□□□□□ -0.24
LINC01543-201ENST00000578367 CDK4P11802 303 aa13.56□□□□□ -0.24
LINC01543-201ENST00000578367 CKMT1AP12532 417 aa13.56□□□□□ -0.24
LINC01543-201ENST00000578367 BRAFP15056 766 aa13.56□□□□□ -0.24
LINC01543-201ENST00000578367 CSRP1P21291 193 aaKnown RBP13.56□□□□□ -0.24
LINC01543-201ENST00000578367 GCAP28676 217 aa13.56□□□□□ -0.24
LINC01543-201ENST00000578367 GPR3P46089 330 aa13.56□□□□□ -0.24
LINC01543-201ENST00000578367 CSRP3P50461 194 aa13.56□□□□□ -0.24
LINC01543-201ENST00000578367 UBE2IP63279 158 aaKnown RBP13.56□□□□□ -0.24
LINC01543-201ENST00000578367 SP140Q13342 867 aa13.56□□□□□ -0.24
LINC01543-201ENST00000578367 NR0B2Q15466 257 aa13.56□□□□□ -0.24
LINC01543-201ENST00000578367 RPE65Q16518 533 aa13.56□□□□□ -0.24
LINC01543-201ENST00000578367 NAXDQ8IW45 347 aa13.56□□□□□ -0.24
LINC01543-201ENST00000578367 NAGSQ8N159 534 aa13.56□□□□□ -0.24
LINC01543-201ENST00000578367 SIDT2Q8NBJ9 832 aaKnown RBP13.56□□□□□ -0.24
LINC01543-201ENST00000578367 FBXO15Q8NCQ5 510 aaPredicted RBP13.56□□□□□ -0.24
LINC01543-201ENST00000578367 OR2I1PQ8NGU4 316 aa13.56□□□□□ -0.24
LINC01543-201ENST00000578367 UHMK1Q8TAS1 419 aaKnown RBP13.56□□□□□ -0.24
LINC01543-201ENST00000578367 ACMSDQ8TDX5 336 aa13.56□□□□□ -0.24
LINC01543-201ENST00000578367 RHBDD1Q8TEB9 315 aa13.56□□□□□ -0.24
LINC01543-201ENST00000578367 TFGQ92734 400 aaPredicted RBP13.56□□□□□ -0.24
LINC01543-201ENST00000578367 FAM122AQ96E09 287 aa13.56□□□□□ -0.24
LINC01543-201ENST00000578367 OLFM1Q99784 485 aa13.56□□□□□ -0.24
LINC01543-201ENST00000578367 EPB41L1Q9H4G0 881 aa13.56□□□□□ -0.24
LINC01543-201ENST00000578367 SLC32A1Q9H598 525 aa13.56□□□□□ -0.24
LINC01543-201ENST00000578367 GPAMQ9HCL2 828 aa13.56□□□□□ -0.24
LINC01543-201ENST00000578367 RXFP3Q9NSD7 469 aa13.56□□□□□ -0.24
LINC01543-201ENST00000578367 PLXNB3Q9ULL4 1909 aa13.56□□□□□ -0.24
LINC01543-201ENST00000578367 A0A087X1B8 175 aa13.55□□□□□ -0.24
LINC01543-201ENST00000578367 HMX2A2RU54 273 aa13.55□□□□□ -0.24
LINC01543-201ENST00000578367 EME2A4GXA9 379 aaPredicted RBP13.55□□□□□ -0.24
LINC01543-201ENST00000578367 FFAR2O15552 330 aa13.55□□□□□ -0.24
LINC01543-201ENST00000578367 SIGLEC6O43699 453 aa13.55□□□□□ -0.24
LINC01543-201ENST00000578367 CBFA2T3O75081 653 aa13.55□□□□□ -0.24
LINC01543-201ENST00000578367 WISP3O95389 354 aaPredicted RBP13.55□□□□□ -0.24
LINC01543-201ENST00000578367 MATN4O95460 622 aa13.55□□□□□ -0.24
LINC01543-201ENST00000578367 LDOC1O95751 146 aaPredicted RBP13.55□□□□□ -0.24
LINC01543-201ENST00000578367 SHBGP04278 402 aa13.55□□□□□ -0.24
LINC01543-201ENST00000578367 MPOP05164 745 aa13.55□□□□□ -0.24
LINC01543-201ENST00000578367 GP1BAP07359 652 aa13.55□□□□□ -0.24
LINC01543-201ENST00000578367 MTHFD1P11586 935 aaKnown RBP13.55□□□□□ -0.24
LINC01543-201ENST00000578367 COL6A2P12110 1019 aa13.55□□□□□ -0.24
LINC01543-201ENST00000578367 GLB1P16278 677 aa13.55□□□□□ -0.24
LINC01543-201ENST00000578367 ZNF37AP17032 561 aaPredicted RBP13.55□□□□□ -0.24
LINC01543-201ENST00000578367 CKMT2P17540 419 aa13.55□□□□□ -0.24
LINC01543-201ENST00000578367 ITGB6P18564 788 aa13.55□□□□□ -0.24
LINC01543-201ENST00000578367 RPL10P27635 214 aaKnown RBP13.55□□□□□ -0.24
LINC01543-201ENST00000578367 PLA2G5P39877 138 aa13.55□□□□□ -0.24
LINC01543-201ENST00000578367 MAGEA12P43365 314 aa13.55□□□□□ -0.24
LINC01543-201ENST00000578367 ATP6V0D1P61421 351 aa13.55□□□□□ -0.24
LINC01543-201ENST00000578367 ILKQ13418 452 aa13.55□□□□□ -0.24
LINC01543-201ENST00000578367 NR1D2Q14995 579 aa13.55□□□□□ -0.24
LINC01543-201ENST00000578367 CLPPQ16740 277 aaPredicted RBP13.55□□□□□ -0.24
LINC01543-201ENST00000578367 PROX2Q3B8N5 592 aa13.55□□□□□ -0.24
LINC01543-201ENST00000578367 TAF1BQ53T94 588 aaPredicted RBP13.55□□□□□ -0.24
LINC01543-201ENST00000578367 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.55□□□□□ -0.24
LINC01543-201ENST00000578367 MROH9Q5TGP6 573 aa13.55□□□□□ -0.24
LINC01543-201ENST00000578367 TTC23LQ6PF05 361 aa13.55□□□□□ -0.24
LINC01543-201ENST00000578367 PAQR3Q6TCH7 311 aa13.55□□□□□ -0.24
LINC01543-201ENST00000578367 ZNF438Q7Z4V0 828 aa13.55□□□□□ -0.24
LINC01543-201ENST00000578367 GLRX5Q86SX6 157 aa13.55□□□□□ -0.24
LINC01543-201ENST00000578367 TRIM48Q8IWZ4 208 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms