RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 GPATCH11Q8N954 259 aa12.43□□□□□ -0.42
MKS1-206ENST00000577824 AVL9Q8NBF6 648 aa12.43□□□□□ -0.42
MKS1-206ENST00000577824 SIDT2Q8NBJ9 832 aaKnown RBP12.43□□□□□ -0.42
MKS1-206ENST00000577824 FAM46DQ8NEK8 389 aa12.43□□□□□ -0.42
MKS1-206ENST00000577824 UHMK1Q8TAS1 419 aaKnown RBP12.43□□□□□ -0.42
MKS1-206ENST00000577824 ZDHHC1Q8WTX9 485 aa12.43□□□□□ -0.42
MKS1-206ENST00000577824 TMEM159Q96B96 161 aa12.43□□□□□ -0.42
MKS1-206ENST00000577824 RMDN2Q96LZ7 410 aa12.43□□□□□ -0.42
MKS1-206ENST00000577824 GPR21Q99679 349 aa12.43□□□□□ -0.42
MKS1-206ENST00000577824 PRDM8Q9NQV8 689 aa12.43□□□□□ -0.42
MKS1-206ENST00000577824 POT1Q9NUX5 634 aa12.43□□□□□ -0.42
MKS1-206ENST00000577824 GALPQ9UBC7 116 aa12.43□□□□□ -0.42
MKS1-206ENST00000577824 DOLKQ9UPQ8 538 aa12.43□□□□□ -0.42
MKS1-206ENST00000577824 WDR37Q9Y2I8 494 aa12.43□□□□□ -0.42
MKS1-206ENST00000577824 PIEZO1Q92508 2521 aa12.43□□□□□ -0.42
MKS1-206ENST00000577824 TM4SF5O14894 197 aa12.42□□□□□ -0.42
MKS1-206ENST00000577824 FFAR2O15552 330 aa12.42□□□□□ -0.42
MKS1-206ENST00000577824 SIGLEC6O43699 453 aa12.42□□□□□ -0.42
MKS1-206ENST00000577824 TSPAN12O95859 305 aa12.42□□□□□ -0.42
MKS1-206ENST00000577824 ITGB6P18564 788 aa12.42□□□□□ -0.42
MKS1-206ENST00000577824 XRCC1P18887 633 aaPredicted RBP12.42□□□□□ -0.42
MKS1-206ENST00000577824 PDHA2P29803 388 aa12.42□□□□□ -0.42
MKS1-206ENST00000577824 MSH2P43246 934 aa12.42□□□□□ -0.42
MKS1-206ENST00000577824 PREPP48147 710 aa12.42□□□□□ -0.42
MKS1-206ENST00000577824 TAS2R39P59534 338 aa12.42□□□□□ -0.42
MKS1-206ENST00000577824 DNAJC3Q13217 504 aa12.42□□□□□ -0.42
MKS1-206ENST00000577824 NR1D2Q14995 579 aa12.42□□□□□ -0.42
MKS1-206ENST00000577824 CLCA4Q14CN2 919 aa12.42□□□□□ -0.42
MKS1-206ENST00000577824 TCEA2Q15560 299 aa12.42□□□□□ -0.42
MKS1-206ENST00000577824 C14orf28Q4W4Y0 310 aa12.42□□□□□ -0.42
MKS1-206ENST00000577824 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.42□□□□□ -0.42
MKS1-206ENST00000577824 TAOK1Q7L7X3 1001 aa12.42□□□□□ -0.42
MKS1-206ENST00000577824 ZNF438Q7Z4V0 828 aa12.42□□□□□ -0.42
MKS1-206ENST00000577824 CCDC91Q7Z6B0 441 aa12.42□□□□□ -0.42
MKS1-206ENST00000577824 VRK3Q8IV63 474 aa12.42□□□□□ -0.42
MKS1-206ENST00000577824 RIBC1Q8N443 379 aaPredicted RBP12.42□□□□□ -0.42
MKS1-206ENST00000577824 KYQ8NBH2 561 aa12.42□□□□□ -0.42
MKS1-206ENST00000577824 SLC37A2Q8TED4 501 aa12.42□□□□□ -0.42
MKS1-206ENST00000577824 INPP5DQ92835 1189 aa12.42□□□□□ -0.42
MKS1-206ENST00000577824 TSPAN17Q96FV3 270 aa12.42□□□□□ -0.42
MKS1-206ENST00000577824 ATXN7L3BQ96GX2 97 aa12.42□□□□□ -0.42
MKS1-206ENST00000577824 ELMO2Q96JJ3 720 aa12.42□□□□□ -0.42
MKS1-206ENST00000577824 CCDC77Q9BR77 488 aa12.42□□□□□ -0.42
MKS1-206ENST00000577824 TMEM109Q9BVC6 243 aa12.42□□□□□ -0.42
MKS1-206ENST00000577824 UCK1Q9HA47 277 aa12.42□□□□□ -0.42
MKS1-206ENST00000577824 SARS2Q9NP81 518 aaKnown RBP12.42□□□□□ -0.42
MKS1-206ENST00000577824 SCHIP1Q9P0W5 487 aaPredicted RBP12.42□□□□□ -0.42
MKS1-206ENST00000577824 PSMC3IPQ9P2W1 217 aaPredicted RBP12.42□□□□□ -0.42
MKS1-206ENST00000577824 TRMT6Q9UJA5 497 aaKnown RBP12.42□□□□□ -0.42
MKS1-206ENST00000577824 MTO1Q9Y2Z2 717 aaKnown RBP12.42□□□□□ -0.42
MKS1-206ENST00000577824 NFS1Q9Y697 457 aa12.42□□□□□ -0.42
MKS1-206ENST00000577824 CABIN1Q9Y6J0 2220 aa12.41□□□□□ -0.42
MKS1-206ENST00000577824 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.41□□□□□ -0.42
MKS1-206ENST00000577824 PDZK1P1A8MUH7 402 aa12.41□□□□□ -0.42
MKS1-206ENST00000577824 B4DGG1 531 aa12.41□□□□□ -0.42
MKS1-206ENST00000577824 NUDT21O43809 227 aaKnown RBP12.41□□□□□ -0.42
MKS1-206ENST00000577824 KRT38O76015 456 aa12.41□□□□□ -0.42
MKS1-206ENST00000577824 MATN4O95460 622 aa12.41□□□□□ -0.42
MKS1-206ENST00000577824 ALDOAP04075 364 aaKnown RBP12.41□□□□□ -0.42
MKS1-206ENST00000577824 MPC1LP0DKB6 136 aa12.41□□□□□ -0.42
MKS1-206ENST00000577824 MTHFD1P11586 935 aaKnown RBP12.41□□□□□ -0.42
MKS1-206ENST00000577824 CKMT1AP12532 417 aa12.41□□□□□ -0.42
MKS1-206ENST00000577824 RPL10P27635 214 aaKnown RBP12.41□□□□□ -0.42
MKS1-206ENST00000577824 SLC26A3P40879 764 aa12.41□□□□□ -0.42
MKS1-206ENST00000577824 HALP42357 657 aa12.41□□□□□ -0.42
MKS1-206ENST00000577824 MAPK9P45984 424 aa12.41□□□□□ -0.42
MKS1-206ENST00000577824 RAB10P61026 200 aa12.41□□□□□ -0.42
MKS1-206ENST00000577824 HSPA14Q0VDF9 509 aa12.41□□□□□ -0.42
MKS1-206ENST00000577824 SEPT7Q16181 437 aaKnown RBP12.41□□□□□ -0.42
MKS1-206ENST00000577824 UNC5DQ6UXZ4 953 aa12.41□□□□□ -0.42
MKS1-206ENST00000577824 GLRX5Q86SX6 157 aa12.41□□□□□ -0.42
MKS1-206ENST00000577824 CEP97Q8IW35 865 aa12.41□□□□□ -0.42
MKS1-206ENST00000577824 RBM12BQ8IXT5 1001 aaKnown RBP12.41□□□□□ -0.42
MKS1-206ENST00000577824 KIAA2013Q8IYS2 634 aa12.41□□□□□ -0.42
MKS1-206ENST00000577824 IQCKQ8N0W5 287 aa12.41□□□□□ -0.42
MKS1-206ENST00000577824 EID2Q8N6I1 236 aa12.41□□□□□ -0.42
MKS1-206ENST00000577824 OR6C4Q8NGE1 309 aa12.41□□□□□ -0.42
MKS1-206ENST00000577824 MAPK15Q8TD08 544 aa12.41□□□□□ -0.42
MKS1-206ENST00000577824 MZB1Q8WU39 189 aa12.41□□□□□ -0.42
MKS1-206ENST00000577824 PATE1Q8WXA2 126 aa12.41□□□□□ -0.42
MKS1-206ENST00000577824 ANKRD7Q92527 254 aa12.41□□□□□ -0.42
MKS1-206ENST00000577824 MTBPQ96DY7 904 aa12.41□□□□□ -0.42
MKS1-206ENST00000577824 PDLIM5Q96HC4 596 aaKnown RBP12.41□□□□□ -0.42
MKS1-206ENST00000577824 APOLD1Q96LR9 279 aa12.41□□□□□ -0.42
MKS1-206ENST00000577824 WWP1Q9H0M0 922 aa12.41□□□□□ -0.42
MKS1-206ENST00000577824 ZNF624Q9P2J8 865 aaPredicted RBP12.41□□□□□ -0.42
MKS1-206ENST00000577824 HEBP2Q9Y5Z4 205 aa12.41□□□□□ -0.42
MKS1-206ENST00000577824 IKBKGQ9Y6K9 419 aa12.41□□□□□ -0.42
MKS1-206ENST00000577824 ARID1BQ8NFD5 2236 aaPredicted RBP12.41□□□□□ -0.42
MKS1-206ENST00000577824 EME2A4GXA9 379 aaPredicted RBP12.4□□□□□ -0.42
MKS1-206ENST00000577824 OR52A4PA6NMU1 304 aa12.4□□□□□ -0.42
MKS1-206ENST00000577824 POC1B-GALNT4F8VUJ3 575 aa12.4□□□□□ -0.42
MKS1-206ENST00000577824 IFRD1O00458 451 aaPredicted RBP12.4□□□□□ -0.42
MKS1-206ENST00000577824 SLC30A4O14863 429 aa12.4□□□□□ -0.42
MKS1-206ENST00000577824 SH3BP5O60239 455 aa12.4□□□□□ -0.42
MKS1-206ENST00000577824 SNX2O60749 519 aa12.4□□□□□ -0.42
MKS1-206ENST00000577824 CDH16O75309 829 aa12.4□□□□□ -0.42
MKS1-206ENST00000577824 KRT37O76014 449 aa12.4□□□□□ -0.42
MKS1-206ENST00000577824 SLC35E2BP0CK96 405 aa12.4□□□□□ -0.42
MKS1-206ENST00000577824 PNLIPP16233 465 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms