RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 SNX24Q9Y343 169 aa9.31□□□□□ -0.92
NPLOC4-219ENST00000576713 MRFAP1Q9Y605 127 aa9.31□□□□□ -0.92
NPLOC4-219ENST00000576713 CNOT1A5YKK6 2376 aaKnown RBP9.31□□□□□ -0.92
NPLOC4-219ENST00000576713 ZCWPW2A0A1B0GU75 182 aa9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 NEMP2A6NFY4 417 aa9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 PCNX2A6NKB5 2137 aa9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 F8W735 103 aaPredicted RBP9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 HYAL3O43820 417 aaPredicted RBP9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 VEGFDO43915 354 aa9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 SEC31AO94979 1220 aaKnown RBP9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 BRAFP15056 766 aa9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 CKMT2P17540 419 aa9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 ACP1P24666 158 aa9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 ACRV1P26436 265 aa9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 HADHAP40939 763 aa9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 ARCN1P48444 511 aaKnown RBP9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 NPY2RP49146 381 aa9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 ITGA8P53708 1063 aa9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 PDE1BQ01064 536 aa9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 ITGA9Q13797 1035 aa9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 HLTFQ14527 1009 aaKnown RBP eCLIP9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 EXOSC6Q5RKV6 272 aaKnown RBP9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 HP1BP3Q5SSJ5 553 aaPredicted RBP9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 ZDHHC20Q5W0Z9 365 aa9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 HIBCHQ6NVY1 386 aaPredicted RBP9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 TMEM220Q6QAJ8 160 aa9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 EFL1Q7Z2Z2 1120 aaKnown RBP9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 SNX20Q7Z614 316 aa9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 CHCHD4Q8N4Q1 142 aa9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 PPHLN1Q8NEY8 458 aaKnown RBP9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 LKAAEAR1Q8TD35 194 aa9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 TRIM44Q96DX7 344 aaPredicted RBP9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 RHOVQ96L33 236 aa9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 C19orf43Q9BQ61 176 aa9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 TMPRSS13Q9BYE2 586 aa9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 IL22Q9GZX6 179 aa9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 DPH5Q9H2P9 285 aa9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 DPEP2Q9H4A9 486 aa9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 PRDM8Q9NQV8 689 aa9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 KLC4Q9NSK0 619 aa9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 GRHL1Q9NZI5 618 aa9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 CRLS1Q9UJA2 301 aa9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 KLK13Q9UKR3 277 aa9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 RIMKLBQ9ULI2 386 aa9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 DNAJC16Q9Y2G8 782 aa9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 WDR37Q9Y2I8 494 aa9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 RNF215Q9Y6U7 377 aa9.3□□□□□ -0.92
NPLOC4-219ENST00000576713 CPED1A4D0V7 1026 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 EME2A4GXA9 379 aaPredicted RBP9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 FAM149AA5PLN7 773 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 MEGF11A6BM72 1044 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 PPM1DO15297 605 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 VAPBO95292 243 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 ALPPL2P10696 532 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 MLNP12872 115 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 ZNF7P17097 686 aaPredicted RBP9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 ITGALP20701 1170 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 PBLDP30039 288 aaPredicted RBP9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 AKT1P31749 480 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 DRG2P55039 364 aaKnown RBP9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 SLC7A5Q01650 507 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 CACNG1Q06432 222 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 ILF3Q12906 894 aaKnown RBP eCLIP9.29□□□□□ -0.921e-7■□□□□ 10.2
NPLOC4-219ENST00000576713 DHX34Q14147 1143 aaKnown RBP9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 NFE2L1Q14494 772 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 FASTKD3Q14CZ7 662 aaKnown RBP9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 NR0B2Q15466 257 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 SEPT7Q16181 437 aaKnown RBP9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 SKIDA1Q1XH10 827 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 INAVAQ3KP66 663 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 GPR33Q49SQ1 333 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 ZNF789Q5FWF6 425 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 LDLRAP1Q5SW96 308 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 DUPD1Q68J44 220 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 LVRNQ6Q4G3 990 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 ZDHHC24Q6UX98 284 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 NAPRTQ6XQN6 538 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 TAS2R42Q7RTR8 314 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 TMPRSS9Q7Z410 1059 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 LRRTM4Q86VH4 590 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 ZNF761Q86XN6 746 aaPredicted RBP9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 GKN2Q86XP6 184 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 TRAPPC5Q8IUR0 188 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 ARL10Q8N8L6 244 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 OR6P1Q8NGX9 317 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 OR4L1Q8NH43 312 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 IFI44Q8TCB0 444 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 SLC37A2Q8TED4 501 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 LRRC45Q96CN5 670 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 NRTNQ99748 197 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 LRRC1Q9BTT6 524 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 GSDMCQ9BYG8 508 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 RMI1Q9H9A7 625 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 SLC17A6Q9P2U8 582 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 ANGPTL2Q9UKU9 493 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 SLC30A1Q9Y6M5 507 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 CHD8Q9HCK8 2581 aa9.29□□□□□ -0.92
NPLOC4-219ENST00000576713 ITPR1Q14643 2758 aa9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 ESYT3A0FGR9 886 aa9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 PMS2P1A4D2B8 440 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms