RNA–Protein interactions for RNA: ENST00000576582.5

CALCOCO2-228, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-228ENST00000576582 SPATA16Q9BXB7 569 aa10.49□□□□□ -0.73
CALCOCO2-228ENST00000576582 AKIRIN1Q9H9L7 192 aaPredicted RBP10.49□□□□□ -0.73
CALCOCO2-228ENST00000576582 TMBIM4Q9HC24 238 aa10.49□□□□□ -0.73
CALCOCO2-228ENST00000576582 LUC7LQ9NQ29 371 aaKnown RBP10.49□□□□□ -0.73
CALCOCO2-228ENST00000576582 IP6K2Q9UHH9 426 aa10.49□□□□□ -0.73
CALCOCO2-228ENST00000576582 IGHV5-51A0A0C4DH38 117 aa10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 GMNCA6NCL1 334 aa10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 BHMG1C9JSJ3 638 aaPredicted RBP10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 CPNE3O75131 537 aaKnown RBP10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 CDK14O94921 469 aa10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 TIAF1O95411 115 aa10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 LDLRP01130 860 aa10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 HLA-DQB2P05538 268 aa10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 KLK3P07288 261 aaPredicted RBP10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 MMP2P08253 660 aa10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 CD48P09326 243 aa10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 RAB40ALP0C0E4 278 aa10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 BRAFP15056 766 aa10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 ARL4DP49703 201 aa10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 CLNS1AP54105 237 aaKnown RBP10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 HSD11B2P80365 405 aa10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 NIPAL4Q0D2K0 466 aa10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 MRPL49Q13405 166 aaKnown RBP10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 DPYSL3Q14195 570 aa10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 KRT81Q14533 505 aa10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 QPCTQ16769 361 aa10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 CCDC38Q502W7 563 aa10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 CPZQ66K79 652 aa10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 HGSNATQ68CP4 663 aa10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 FAM199XQ6PEV8 388 aaPredicted RBP10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 CRTC3Q6UUV7 619 aa10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 MED25Q71SY5 747 aa10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 CROCCP2Q86T23 111 aa10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 TRAM1L1Q8N609 369 aa10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 TMEM102Q8N9M5 508 aaPredicted RBP10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 ARMC2Q8NEN0 867 aa10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 GLYATL1Q969I3 302 aa10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 FAF2Q96CS3 445 aa10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 ZNF514Q96K75 400 aaPredicted RBP10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 LRFN5Q96NI6 719 aa10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 CD180Q99467 661 aa10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 SH3GL3Q99963 347 aa10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 ZNF670Q9BS34 389 aa10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 NHEJ1Q9H9Q4 299 aaPredicted RBP10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 ZFYVE1Q9HBF4 777 aa10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 FGF21Q9NSA1 209 aa10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 SLC5A6Q9Y289 635 aa10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 DNAJC16Q9Y2G8 782 aa10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 TTLL3Q9Y4R7 772 aa10.48□□□□□ -0.73
CALCOCO2-228ENST00000576582 POLQO75417 2590 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 GOLGA6L10A0A0M3HER8 536 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 OR52A4PA6NMU1 304 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 CLDN1O95832 211 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 CYP1A2P05177 515 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 MX2P20592 715 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 RPL10P27635 214 aaKnown RBP10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 COL8A1P27658 744 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 HALP42357 657 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 RRADP55042 308 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 RPS18P62269 152 aaKnown RBP10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 CHAF1BQ13112 559 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 MMRN1Q13201 1228 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 IL10RAQ13651 578 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 ITIH4Q14624 930 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 PDK2Q15119 407 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 SEPT7Q16181 437 aaKnown RBP10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 HADHQ16836 314 aaKnown RBP10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 ZNF648Q5T619 568 aaPredicted RBP10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 RNF187Q5TA31 235 aaPredicted RBP10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 SLC6A19Q695T7 634 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 TMC3Q7Z5M5 1100 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 ZNF547Q8IVP9 402 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 SLC34A3Q8N130 599 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 CARFQ8N187 725 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 D2HGDHQ8N465 521 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 Q8NA96 180 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 GLIS1Q8NBF1 620 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 GPR26Q8NDV2 337 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 BRSK1Q8TDC3 778 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 ADAMTS17Q8TE56 1095 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 MR1Q95460 341 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 EID2BQ96D98 161 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 HDAC11Q96DB2 347 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 CAPZA3Q96KX2 299 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 C5orf34Q96MH7 638 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 LRRC1Q9BTT6 524 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 NUP85Q9BW27 656 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 THAP2Q9H0W7 228 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 MAGEE1Q9HCI5 957 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 C5AR2Q9P296 337 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 MAP10Q9P2G4 905 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 DMGDHQ9UI17 866 aaKnown RBP10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 ERRFI1Q9UJM3 462 aaPredicted RBP10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 ANAPC7Q9UJX3 599 aa10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 BZW2Q9Y6E2 419 aaKnown RBP10.47□□□□□ -0.73
CALCOCO2-228ENST00000576582 TNRC6AQ8NDV7 1962 aaKnown RBP10.46□□□□□ -0.73
CALCOCO2-228ENST00000576582 POLEQ07864 2286 aa10.46□□□□□ -0.73
CALCOCO2-228ENST00000576582 SCRG1O75711 98 aa10.46□□□□□ -0.73
CALCOCO2-228ENST00000576582 TMEM63AO94886 807 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms