RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 SLC46A1Q96NT5 459 aa12.96□□□□□ -0.33
RPAIN-216ENST00000575599 INSM2Q96T92 566 aaPredicted RBP12.96□□□□□ -0.33
RPAIN-216ENST00000575599 KIFC1Q9BW19 673 aa12.96□□□□□ -0.33
RPAIN-216ENST00000575599 EPB41L1Q9H4G0 881 aa12.96□□□□□ -0.33
RPAIN-216ENST00000575599 MRM3Q9HC36 420 aaKnown RBP12.96□□□□□ -0.33
RPAIN-216ENST00000575599 MARCH4Q9P2E8 410 aaPredicted RBP12.96□□□□□ -0.33
RPAIN-216ENST00000575599 DMGDHQ9UI17 866 aaKnown RBP12.96□□□□□ -0.33
RPAIN-216ENST00000575599 SOX13Q9UN79 622 aa12.96□□□□□ -0.33
RPAIN-216ENST00000575599 APC2O95996 2303 aa12.96□□□□□ -0.33
RPAIN-216ENST00000575599 USP24Q9UPU5 2620 aa12.96□□□□□ -0.34
RPAIN-216ENST00000575599 C17orf113A0A1B0GUU1 675 aa12.95□□□□□ -0.34
RPAIN-216ENST00000575599 QSOX1O00391 747 aa12.95□□□□□ -0.34
RPAIN-216ENST00000575599 HGSO14964 777 aaPredicted RBP12.95□□□□□ -0.34
RPAIN-216ENST00000575599 CD3EAPO15446 510 aaKnown RBP12.95□□□□□ -0.34
RPAIN-216ENST00000575599 FTH1P02794 183 aa12.95□□□□□ -0.34
RPAIN-216ENST00000575599 ITGA2BP08514 1039 aa12.95□□□□□ -0.34
RPAIN-216ENST00000575599 OR56A5P0C7T3 313 aa12.95□□□□□ -0.34
RPAIN-216ENST00000575599 ITGB6P18564 788 aa12.95□□□□□ -0.34
RPAIN-216ENST00000575599 PPARGP37231 505 aaPredicted RBP12.95□□□□□ -0.34
RPAIN-216ENST00000575599 PREPP48147 710 aa12.95□□□□□ -0.34
RPAIN-216ENST00000575599 MAPK10P53779 464 aa12.95□□□□□ -0.34
RPAIN-216ENST00000575599 GFERP55789 205 aa12.95□□□□□ -0.34
RPAIN-216ENST00000575599 PCBP4P57723 403 aaKnown RBP12.95□□□□□ -0.34
RPAIN-216ENST00000575599 ERVPABLB-1P60509 514 aa12.95□□□□□ -0.34
RPAIN-216ENST00000575599 TRA2AQ13595 282 aaKnown RBP eCLIP12.95□□□□□ -0.34
RPAIN-216ENST00000575599 CUL1Q13616 776 aa12.95□□□□□ -0.34
RPAIN-216ENST00000575599 BOP1Q14137 746 aaKnown RBP12.95□□□□□ -0.34
RPAIN-216ENST00000575599 KRT33BQ14525 404 aa12.95□□□□□ -0.34
RPAIN-216ENST00000575599 BRD3Q15059 726 aa12.95□□□□□ -0.34
RPAIN-216ENST00000575599 IZUMO3Q5VZ72 239 aa12.95□□□□□ -0.34
RPAIN-216ENST00000575599 DUPD1Q68J44 220 aa12.95□□□□□ -0.34
RPAIN-216ENST00000575599 WDR74Q6RFH5 385 aaPredicted RBP12.95□□□□□ -0.34
RPAIN-216ENST00000575599 CERS6Q6ZMG9 384 aa12.95□□□□□ -0.34
RPAIN-216ENST00000575599 PPIL6Q8IXY8 311 aa12.95□□□□□ -0.34
RPAIN-216ENST00000575599 NAT8LQ8N9F0 302 aa12.95□□□□□ -0.34
RPAIN-216ENST00000575599 MCUQ8NE86 351 aa12.95□□□□□ -0.34
RPAIN-216ENST00000575599 SNIP1Q8TAD8 396 aaKnown RBP12.95□□□□□ -0.34
RPAIN-216ENST00000575599 ELMO1Q92556 727 aa12.95□□□□□ -0.34
RPAIN-216ENST00000575599 RSC1A1Q92681 617 aa12.95□□□□□ -0.34
RPAIN-216ENST00000575599 TMEM159Q96B96 161 aa12.95□□□□□ -0.34
RPAIN-216ENST00000575599 SERPINB12Q96P63 405 aa12.95□□□□□ -0.34
RPAIN-216ENST00000575599 TRIM56Q9BRZ2 755 aaKnown RBP12.95□□□□□ -0.34
RPAIN-216ENST00000575599 ANKZF1Q9H8Y5 726 aa12.95□□□□□ -0.34
RPAIN-216ENST00000575599 XAB2Q9HCS7 855 aaKnown RBP12.95□□□□□ -0.34
RPAIN-216ENST00000575599 OGFRQ9NZT2 677 aa12.95□□□□□ -0.34
RPAIN-216ENST00000575599 SAMD15Q9P1V8 674 aa12.95□□□□□ -0.34
RPAIN-216ENST00000575599 ACACAQ13085 2346 aa12.95□□□□□ -0.34
RPAIN-216ENST00000575599 PIKFYVEQ9Y2I7 2098 aa12.95□□□□□ -0.34
RPAIN-216ENST00000575599 EPG5Q9HCE0 2579 aa12.95□□□□□ -0.34
RPAIN-216ENST00000575599 ESYT3A0FGR9 886 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 CDRT15L2A8MXV6 281 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 GOLGA8KD6RF30 607 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 GOLGA8TH3BQL2 631 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 IFRD1O00458 451 aaPredicted RBP12.94□□□□□ -0.34
RPAIN-216ENST00000575599 RRP8O43159 456 aaKnown RBP12.94□□□□□ -0.34
RPAIN-216ENST00000575599 CTIFO43310 598 aaKnown RBP12.94□□□□□ -0.34
RPAIN-216ENST00000575599 VAPBO95292 243 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 MLNP12872 115 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 CCL4P13236 92 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 CSTF2P33240 577 aaKnown RBP eCLIP12.94□□□□□ -0.34
RPAIN-216ENST00000575599 EIF2S3P41091 472 aaKnown RBP12.94□□□□□ -0.34
RPAIN-216ENST00000575599 ETV5P41161 510 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 CAPZBP47756 277 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 CAV1Q03135 178 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 SYTL3Q4VX76 610 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 ZNF449Q6P9G9 518 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 IGF2-ASQ6U949 168 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 NAPRTQ6XQN6 538 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 FAM129CQ86XR2 697 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 PLXDC1Q8IUK5 500 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 AGBL5Q8NDL9 886 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 HNRNPLLQ8WVV9 542 aaKnown RBP12.94□□□□□ -0.34
RPAIN-216ENST00000575599 ZNF669Q96BR6 464 aaPredicted RBP12.94□□□□□ -0.34
RPAIN-216ENST00000575599 SGSM3Q96HU1 749 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 TGM7Q96PF1 710 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 WHRNQ9P202 907 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 MTRF1LQ9UGC7 380 aaKnown RBP12.94□□□□□ -0.34
RPAIN-216ENST00000575599 MAD1L1Q9Y6D9 718 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 MN1Q10571 1320 aaPredicted RBP12.94□□□□□ -0.34
RPAIN-216ENST00000575599 DMXL2Q8TDJ6 3036 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 SDR42E2A6NKP2 422 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 F8W8V4 182 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 DNALI1O14645 258 aaPredicted RBP12.94□□□□□ -0.34
RPAIN-216ENST00000575599 CAPN5O15484 640 aaPredicted RBP12.94□□□□□ -0.34
RPAIN-216ENST00000575599 ERLIN1O75477 346 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 KRT37O76014 449 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 GSTM1P09488 218 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 PAMP19021 973 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 ARNTP27540 789 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 PDHA2P29803 388 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 SLC5A2P31639 672 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 MLLT3P42568 568 aaPredicted RBP12.94□□□□□ -0.34
RPAIN-216ENST00000575599 RPL21P46778 160 aaKnown RBP12.94□□□□□ -0.34
RPAIN-216ENST00000575599 TTPAP49638 278 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 PLTPP55058 493 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 CSE1LP55060 971 aaKnown RBP12.94□□□□□ -0.34
RPAIN-216ENST00000575599 GSTM4Q03013 218 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 NAA30Q147X3 362 aaPredicted RBP12.94□□□□□ -0.34
RPAIN-216ENST00000575599 ZNF658BQ4V348 819 aaPredicted RBP12.94□□□□□ -0.34
RPAIN-216ENST00000575599 RNASEH2BQ5TBB1 312 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms