RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 B3GNTL1Q67FW5 361 aaPredicted RBP8.74□□□□□ -1.01
SMG6-218ENST00000575454 FAM83HQ6ZRV2 1179 aaPredicted RBP8.74□□□□□ -1.01
SMG6-218ENST00000575454 B4GALNT4Q76KP1 1039 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 CUZD1Q86UP6 607 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 ZC3H18Q86VM9 953 aaKnown RBP8.74□□□□□ -1.01
SMG6-218ENST00000575454 KCNMB4Q86W47 210 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 RASGEF1AQ8N9B8 481 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 ACVR1CQ8NER5 493 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 OR4E2Q8NGC2 313 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 OR2Y1Q8NGV0 311 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 OR2L2Q8NH16 312 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 PROKR1Q8TCW9 393 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 PPP4R1Q8TF05 950 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 LCN9Q8WX39 176 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 TADA1Q96BN2 335 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 PTERQ96BW5 349 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 FAF2Q96CS3 445 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 INSM2Q96T92 566 aaPredicted RBP8.74□□□□□ -1.01
SMG6-218ENST00000575454 CCM2Q9BSQ5 444 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 AP1M1Q9BXS5 423 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 PITPNM3Q9BZ71 974 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 WWP1Q9H0M0 922 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 SRMSQ9H3Y6 488 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 BPIFA1Q9NP55 256 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 P4HTMQ9NXG6 502 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 CHMP5Q9NZZ3 219 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 HACD3Q9P035 362 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 COPG2Q9UBF2 871 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 NDOR1Q9UHB4 597 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 KLF2Q9Y5W3 355 aaPredicted RBP8.74□□□□□ -1.01
SMG6-218ENST00000575454 HIVEP3Q5T1R4 2406 aa8.73□□□□□ -1.01
SMG6-218ENST00000575454 A0A1W2PQJ5 194 aa8.73□□□□□ -1.01
SMG6-218ENST00000575454 OR2AG2A6NM03 316 aa8.73□□□□□ -1.01
SMG6-218ENST00000575454 PPP1R12AO14974 1030 aaPredicted RBP8.73□□□□□ -1.01
SMG6-218ENST00000575454 LCA5LO95447 670 aa8.73□□□□□ -1.01
SMG6-218ENST00000575454 EPOP01588 193 aa8.73□□□□□ -1.01
SMG6-218ENST00000575454 STSP08842 583 aa8.73□□□□□ -1.01
SMG6-218ENST00000575454 ZFXP17010 805 aaPredicted RBP8.73□□□□□ -1.01
SMG6-218ENST00000575454 PRDX3P30048 256 aaKnown RBP8.73□□□□□ -1.01
SMG6-218ENST00000575454 AKT1P31749 480 aa8.73□□□□□ -1.01
SMG6-218ENST00000575454 CA5AP35218 305 aa8.73□□□□□ -1.01
SMG6-218ENST00000575454 CTSCP53634 463 aa8.73□□□□□ -1.01
SMG6-218ENST00000575454 DCDP81605 110 aaKnown RBP8.73□□□□□ -1.01
SMG6-218ENST00000575454 AP1B1Q10567 949 aa8.73□□□□□ -1.01
SMG6-218ENST00000575454 SLC10A2Q12908 348 aaPredicted RBP8.73□□□□□ -1.01
SMG6-218ENST00000575454 TLR1Q15399 786 aa8.73□□□□□ -1.01
SMG6-218ENST00000575454 PCSK7Q16549 785 aa8.73□□□□□ -1.01
SMG6-218ENST00000575454 FILIP1LQ4L180 1135 aa8.73□□□□□ -1.01
SMG6-218ENST00000575454 FNBP1LQ5T0N5 605 aa8.73□□□□□ -1.01
SMG6-218ENST00000575454 GPRC6AQ5T6X5 926 aa8.73□□□□□ -1.01
SMG6-218ENST00000575454 AGAP7PQ5VUJ5 663 aa8.73□□□□□ -1.01
SMG6-218ENST00000575454 SASS6Q6UVJ0 657 aa8.73□□□□□ -1.01
SMG6-218ENST00000575454 APTXQ7Z2E3 356 aaKnown RBP8.73□□□□□ -1.01
SMG6-218ENST00000575454 GDF7Q7Z4P5 450 aa8.73□□□□□ -1.01
SMG6-218ENST00000575454 HOOK3Q86VS8 718 aa8.73□□□□□ -1.01
SMG6-218ENST00000575454 PQLC3Q8N755 202 aa8.73□□□□□ -1.01
SMG6-218ENST00000575454 DNAJB14Q8TBM8 379 aa8.73□□□□□ -1.01
SMG6-218ENST00000575454 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.73□□□□□ -1.01
SMG6-218ENST00000575454 FAR1Q8WVX9 515 aa8.73□□□□□ -1.01
SMG6-218ENST00000575454 INPP5DQ92835 1189 aa8.73□□□□□ -1.01
SMG6-218ENST00000575454 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.73□□□□□ -1.01
SMG6-218ENST00000575454 VPS50Q96JG6 964 aa8.73□□□□□ -1.01
SMG6-218ENST00000575454 BTBD6Q96KE9 485 aa8.73□□□□□ -1.01
SMG6-218ENST00000575454 AGAP4Q96P64 663 aa8.73□□□□□ -1.01
SMG6-218ENST00000575454 GBP5Q96PP8 586 aa8.73□□□□□ -1.01
SMG6-218ENST00000575454 MAK16Q9BXY0 300 aaKnown RBP8.73□□□□□ -1.01
SMG6-218ENST00000575454 THAP2Q9H0W7 228 aa8.73□□□□□ -1.01
SMG6-218ENST00000575454 CHST11Q9NPF2 352 aa8.73□□□□□ -1.01
SMG6-218ENST00000575454 SMOXQ9NWM0 555 aa8.73□□□□□ -1.01
SMG6-218ENST00000575454 IFT80Q9P2H3 777 aaPredicted RBP8.73□□□□□ -1.01
SMG6-218ENST00000575454 PTRH2Q9Y3E5 179 aaKnown RBP8.73□□□□□ -1.01
SMG6-218ENST00000575454 PKP3Q9Y446 797 aa8.73□□□□□ -1.01
SMG6-218ENST00000575454 CFAP20Q9Y6A4 193 aaKnown RBP8.73□□□□□ -1.01
SMG6-218ENST00000575454 POLEQ07864 2286 aa8.73□□□□□ -1.01
SMG6-218ENST00000575454 C2orf74A8MZ97 194 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 ZNF487B1APH4 448 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 AURKAO14965 403 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 UGT1A9O60656 530 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 ZG16O60844 167 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 OR2B3O76000 313 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 RALBP11234 206 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 UGT1A6P19224 532 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 UGT1A1P22309 533 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 UGT1A4P22310 534 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 PBLDP30039 288 aaPredicted RBP8.72□□□□□ -1.01
SMG6-218ENST00000575454 HNRNPH3P31942 346 aaKnown RBP8.72□□□□□ -1.01
SMG6-218ENST00000575454 CDC16Q13042 620 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 STX1AQ16623 288 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 BCL7AQ4VC05 210 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 ATP13A4Q4VNC1 1196 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 ZNF385CQ66K41 422 aaPredicted RBP8.72□□□□□ -1.01
SMG6-218ENST00000575454 RHBDD2Q6NTF9 364 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 MTFR2Q6P444 385 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 ZNF449Q6P9G9 518 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 FBXO38Q6PIJ6 1188 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 SARM1Q6SZW1 724 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 FAM151BQ6UXP7 276 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 SPOCD1Q6ZMY3 1216 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 BCORP1Q8N888 145 aa8.72□□□□□ -1.01
SMG6-218ENST00000575454 GRHL3Q8TE85 626 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms