RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 MLXIPLQ9NP71 852 aa10.17□□□□□ -0.78
TVP23B-208ENST00000575261 C1GALT1Q9NS00 363 aa10.17□□□□□ -0.78
TVP23B-208ENST00000575261 FKBPLQ9UIM3 349 aa10.17□□□□□ -0.78
TVP23B-208ENST00000575261 CRLS1Q9UJA2 301 aa10.17□□□□□ -0.78
TVP23B-208ENST00000575261 POMT2Q9UKY4 750 aa10.17□□□□□ -0.78
TVP23B-208ENST00000575261 G3BP2Q9UN86 482 aaKnown RBP10.17□□□□□ -0.78
TVP23B-208ENST00000575261 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.17□□□□□ -0.78
TVP23B-208ENST00000575261 PCDHGB7Q9Y5F8 929 aa10.17□□□□□ -0.78
TVP23B-208ENST00000575261 NOTCH2Q04721 2471 aa10.17□□□□□ -0.78
TVP23B-208ENST00000575261 CENPEQ02224 2701 aa10.16□□□□□ -0.78
TVP23B-208ENST00000575261 GSAPA4D1B5 854 aa10.16□□□□□ -0.78
TVP23B-208ENST00000575261 C5orf60A6NFR6 353 aa10.16□□□□□ -0.78
TVP23B-208ENST00000575261 CFAP99D6REC4 459 aa10.16□□□□□ -0.78
TVP23B-208ENST00000575261 APOC4-APOC2K7ER74 178 aa10.16□□□□□ -0.78
TVP23B-208ENST00000575261 MEN1O00255 615 aa10.16□□□□□ -0.78
TVP23B-208ENST00000575261 MAP3K7O43318 606 aa10.16□□□□□ -0.78
TVP23B-208ENST00000575261 SORBS2O94875 1100 aaKnown RBP10.16□□□□□ -0.78
TVP23B-208ENST00000575261 TMEM63AO94886 807 aa10.16□□□□□ -0.78
TVP23B-208ENST00000575261 AGFG2O95081 481 aa10.16□□□□□ -0.78
TVP23B-208ENST00000575261 ZRANB2O95218 330 aaKnown RBP eCLIP10.16□□□□□ -0.78
TVP23B-208ENST00000575261 APOC2P02655 101 aa10.16□□□□□ -0.78
TVP23B-208ENST00000575261 MSL3P1P0C860 447 aa10.16□□□□□ -0.78
TVP23B-208ENST00000575261 POLR2CP19387 275 aaPredicted RBP10.16□□□□□ -0.78
TVP23B-208ENST00000575261 GNLYP22749 145 aa10.16□□□□□ -0.78
TVP23B-208ENST00000575261 PRLHRP49683 370 aa10.16□□□□□ -0.78
TVP23B-208ENST00000575261 CCL11P51671 97 aa10.16□□□□□ -0.78
TVP23B-208ENST00000575261 ABRQ12979 859 aa10.16□□□□□ -0.78
TVP23B-208ENST00000575261 PTPRCAPQ14761 206 aa10.16□□□□□ -0.78
TVP23B-208ENST00000575261 NADK2Q4G0N4 442 aa10.16□□□□□ -0.78
TVP23B-208ENST00000575261 FHL5Q5TD97 284 aa10.16□□□□□ -0.78
TVP23B-208ENST00000575261 DAAM2Q86T65 1068 aa10.16□□□□□ -0.78
TVP23B-208ENST00000575261 RCOR2Q8IZ40 523 aa10.16□□□□□ -0.78
TVP23B-208ENST00000575261 ENDOVQ8N8Q3 282 aaKnown RBP10.16□□□□□ -0.78
TVP23B-208ENST00000575261 SLC38A9Q8NBW4 561 aa10.16□□□□□ -0.78
TVP23B-208ENST00000575261 ACVR1CQ8NER5 493 aa10.16□□□□□ -0.78
TVP23B-208ENST00000575261 ADAMTS17Q8TE56 1095 aa10.16□□□□□ -0.78
TVP23B-208ENST00000575261 ULK4Q96C45 1275 aa10.16□□□□□ -0.78
TVP23B-208ENST00000575261 CLIP3Q96DZ5 547 aa10.16□□□□□ -0.78
TVP23B-208ENST00000575261 PPM1MQ96MI6 270 aa10.16□□□□□ -0.78
TVP23B-208ENST00000575261 CCM2Q9BSQ5 444 aa10.16□□□□□ -0.78
TVP23B-208ENST00000575261 NLNQ9BYT8 704 aa10.16□□□□□ -0.78
TVP23B-208ENST00000575261 GOLPH3Q9H4A6 298 aa10.16□□□□□ -0.78
TVP23B-208ENST00000575261 VPS37BQ9H9H4 285 aa10.16□□□□□ -0.78
TVP23B-208ENST00000575261 TCFL5Q9UL49 500 aa10.16□□□□□ -0.78
TVP23B-208ENST00000575261 AAR2Q9Y312 384 aaKnown RBP10.16□□□□□ -0.78
TVP23B-208ENST00000575261 ZNF451Q9Y4E5 1061 aa10.16□□□□□ -0.78
TVP23B-208ENST00000575261 ALG6Q9Y672 507 aa10.16□□□□□ -0.78
TVP23B-208ENST00000575261 ICE1Q9Y2F5 2266 aa10.16□□□□□ -0.78
TVP23B-208ENST00000575261 MACROD2A1Z1Q3 448 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 SLC9B1P1A6NJY1 282 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 AGAP14A8MT82 685 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 TMEM150CB9EJG8 249 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 H7C0C1 242 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 IFRD1O00458 451 aaPredicted RBP10.15□□□□□ -0.78
TVP23B-208ENST00000575261 SGTAO43765 313 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 DPM1O60762 260 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 CEACAM4O75871 244 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 CRTAMO95727 393 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 AGTP01019 485 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 POLBP06746 335 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 ITGALP20701 1170 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 CYP2A7P20853 494 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 RBL1P28749 1068 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 RORAP35398 523 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 HADHAP40939 763 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 ATP5OP48047 213 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 PREPP48147 710 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 MARCKSL1P49006 195 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 VAV2P52735 878 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 PRPSAP1Q14558 356 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 PLEKHS1Q5SXH7 462 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 CCDC181Q5TID7 509 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 PRAMEF17Q5VTA0 474 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 FBXO38Q6PIJ6 1188 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 FAM198BQ6UWH4 519 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 RANBP10Q6VN20 620 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 BBS12Q6ZW61 710 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 HPS6Q86YV9 775 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 SYTL1Q8IYJ3 562 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 CFAP206Q8IYR0 622 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 NXPE1Q8N323 547 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 LILRA3Q8N6C8 439 aaPredicted RBP10.15□□□□□ -0.78
TVP23B-208ENST00000575261 OR4E2Q8NGC2 313 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 NAT14Q8WUY8 206 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 HEXDCQ8WVB3 486 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 LCN9Q8WX39 176 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 PPP1R2P1Q96PQ5 205 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 COPS8Q99627 209 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 GORASP1Q9BQQ3 440 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 SLC7A5P2Q9GIP4 190 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 SRMSQ9H3Y6 488 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 ACTR5Q9H9F9 607 aaPredicted RBP10.15□□□□□ -0.78
TVP23B-208ENST00000575261 PCMTD2Q9NV79 361 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 MAP4K5Q9Y4K4 846 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 MYO9AB2RTY4 2548 aa10.15□□□□□ -0.78
TVP23B-208ENST00000575261 MED13Q9UHV7 2174 aa10.15□□□□□ -0.79
TVP23B-208ENST00000575261 SHANK1Q9Y566 2161 aa10.15□□□□□ -0.79
TVP23B-208ENST00000575261 CRYBG3Q68DQ2 2970 aa10.14□□□□□ -0.79
TVP23B-208ENST00000575261 C17orf113A0A1B0GUU1 675 aa10.14□□□□□ -0.79
TVP23B-208ENST00000575261 C9J4A7 227 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms