RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 CCL7P80098 99 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 ILF2Q12905 390 aaKnown RBP10.79□□□□□ -0.68
CHD3-216ENST00000573936 SPIDRQ14159 915 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 KRT33BQ14525 404 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 TMED2Q15363 201 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 RPE65Q16518 533 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 ZNF658BQ4V348 819 aaPredicted RBP10.79□□□□□ -0.68
CHD3-216ENST00000573936 SYTL3Q4VX76 610 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 HSP90AA5PQ58FG0 334 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 HES3Q5TGS1 186 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 CDCP2Q5VXM1 449 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 STEAP4Q687X5 459 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 ZNF470Q6ECI4 717 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 CAPRIN2Q6IMN6 1127 aaKnown RBP10.79□□□□□ -0.68
CHD3-216ENST00000573936 UNC5AQ6ZN44 842 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 RBM44Q6ZP01 1051 aaKnown RBP10.79□□□□□ -0.68
CHD3-216ENST00000573936 KIAA0408Q6ZU52 694 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 SPRED1Q7Z699 444 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 IGDCC3Q8IVU1 814 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 SFTPA2Q8IWL1 248 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 PALM2Q8IXS6 379 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 ZBED8Q8IZ13 594 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 Q8N9G6 341 aaPredicted RBP10.79□□□□□ -0.68
CHD3-216ENST00000573936 OR10G6Q8NH81 332 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 FBXO25Q8TCJ0 367 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 NAT14Q8WUY8 206 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 ASZ1Q8WWH4 475 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 LPGAT1Q92604 370 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 TMEM159Q96B96 161 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 CERS2Q96G23 380 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 CFAP36Q96G28 342 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 C12orf66Q96MD2 445 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 BBC3Q96PG8 261 aaPredicted RBP10.79□□□□□ -0.68
CHD3-216ENST00000573936 UBL7Q96S82 380 aaPredicted RBP10.79□□□□□ -0.68
CHD3-216ENST00000573936 WWP1Q9H0M0 922 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 TSPYL1Q9H0U9 437 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 CCDC68Q9H2F9 335 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 SAYSD1Q9NPB0 183 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 PPANQ9NQ55 473 aaKnown RBP10.79□□□□□ -0.68
CHD3-216ENST00000573936 IARS2Q9NSE4 1012 aaKnown RBP10.79□□□□□ -0.68
CHD3-216ENST00000573936 KCNK4Q9NYG8 393 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 ZNF624Q9P2J8 865 aaPredicted RBP10.79□□□□□ -0.68
CHD3-216ENST00000573936 MTRF1LQ9UGC7 380 aaKnown RBP10.79□□□□□ -0.68
CHD3-216ENST00000573936 RABGEF1Q9UJ41 708 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 FBXO5Q9UKT4 447 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 PSMD13Q9UNM6 376 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 CLCA2Q9UQC9 943 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 WDR37Q9Y2I8 494 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 COMMD10Q9Y6G5 202 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 CFAP46Q8IYW2 2715 aa10.78□□□□□ -0.68
CHD3-216ENST00000573936 HELZ2Q9BYK8 2649 aaKnown RBP10.78□□□□□ -0.68
CHD3-216ENST00000573936 SLC5A10A0PJK1 596 aa10.78□□□□□ -0.68
CHD3-216ENST00000573936 LILRA5A6NI73 299 aa10.78□□□□□ -0.68
CHD3-216ENST00000573936 B4GAT1O43505 415 aa10.78□□□□□ -0.68
CHD3-216ENST00000573936 APOA4P06727 396 aa10.78□□□□□ -0.68
CHD3-216ENST00000573936 ERVK-10P10266 1014 aa10.78□□□□□ -0.68
CHD3-216ENST00000573936 MTHFD1P11586 935 aaKnown RBP10.78□□□□□ -0.68
CHD3-216ENST00000573936 PKMP14618 531 aaKnown RBP10.78□□□□□ -0.68
CHD3-216ENST00000573936 SLC1A2P43004 574 aa10.78□□□□□ -0.68
CHD3-216ENST00000573936 PPM1FP49593 454 aaPredicted RBP10.78□□□□□ -0.68
CHD3-216ENST00000573936 CLDN6P56747 220 aa10.78□□□□□ -0.68
CHD3-216ENST00000573936 OR1D5P58170 312 aa10.78□□□□□ -0.68
CHD3-216ENST00000573936 CTBP1Q13363 440 aa10.78□□□□□ -0.68
CHD3-216ENST00000573936 SQSTM1Q13501 440 aa10.78□□□□□ -0.68
CHD3-216ENST00000573936 HP1BP3Q5SSJ5 553 aaPredicted RBP10.78□□□□□ -0.68
CHD3-216ENST00000573936 PLEKHS1Q5SXH7 462 aa10.78□□□□□ -0.68
CHD3-216ENST00000573936 TEX35Q5T0J7 233 aa10.78□□□□□ -0.68
CHD3-216ENST00000573936 TMEM26Q6ZUK4 368 aa10.78□□□□□ -0.68
CHD3-216ENST00000573936 CYS1Q717R9 158 aa10.78□□□□□ -0.68
CHD3-216ENST00000573936 GALNT7Q86SF2 657 aa10.78□□□□□ -0.68
CHD3-216ENST00000573936 PIM3Q86V86 326 aa10.78□□□□□ -0.68
CHD3-216ENST00000573936 ANKMY2Q8IV38 441 aa10.78□□□□□ -0.68
CHD3-216ENST00000573936 CNTN4Q8IWV2 1026 aa10.78□□□□□ -0.68
CHD3-216ENST00000573936 C2CD4AQ8NCU7 369 aaPredicted RBP10.78□□□□□ -0.68
CHD3-216ENST00000573936 GSDMBQ8TAX9 411 aa10.78□□□□□ -0.68
CHD3-216ENST00000573936 TMEM74Q96NL1 305 aa10.78□□□□□ -0.68
CHD3-216ENST00000573936 INSM2Q96T92 566 aaPredicted RBP10.78□□□□□ -0.68
CHD3-216ENST00000573936 OR52A5Q9H2C5 316 aa10.78□□□□□ -0.68
CHD3-216ENST00000573936 MVB12BQ9H7P6 319 aa10.78□□□□□ -0.68
CHD3-216ENST00000573936 SYNDIG1Q9H7V2 258 aa10.78□□□□□ -0.68
CHD3-216ENST00000573936 SLC40A1Q9NP59 571 aa10.78□□□□□ -0.68
CHD3-216ENST00000573936 LATS2Q9NRM7 1088 aa10.78□□□□□ -0.68
CHD3-216ENST00000573936 NSMCE4AQ9NXX6 385 aa10.78□□□□□ -0.68
CHD3-216ENST00000573936 IL1RAPL1Q9NZN1 696 aa10.78□□□□□ -0.68
CHD3-216ENST00000573936 FAM8A1Q9UBU6 413 aa10.78□□□□□ -0.68
CHD3-216ENST00000573936 CRYL1Q9Y2S2 319 aa10.78□□□□□ -0.68
CHD3-216ENST00000573936 KNTC1P50748 2209 aa10.78□□□□□ -0.68
CHD3-216ENST00000573936 ASH1LQ9NR48 2969 aaKnown RBP10.77□□□□□ -0.68
CHD3-216ENST00000573936 MGAQ8IWI9 3026 aa10.77□□□□□ -0.68
CHD3-216ENST00000573936 ATMQ13315 3056 aa10.77□□□□□ -0.68
CHD3-216ENST00000573936 A0A087WV48 116 aa10.77□□□□□ -0.69
CHD3-216ENST00000573936 IGHV1OR21-1A0A087WYE8 117 aa10.77□□□□□ -0.69
CHD3-216ENST00000573936 OR52A4PA6NMU1 304 aa10.77□□□□□ -0.69
CHD3-216ENST00000573936 BHMG1C9JSJ3 638 aaPredicted RBP10.77□□□□□ -0.69
CHD3-216ENST00000573936 E5RI56 91 aa10.77□□□□□ -0.69
CHD3-216ENST00000573936 TK2O00142 265 aa10.77□□□□□ -0.69
CHD3-216ENST00000573936 RRP8O43159 456 aaKnown RBP10.77□□□□□ -0.69
CHD3-216ENST00000573936 DUX1O43812 170 aa10.77□□□□□ -0.69
CHD3-216ENST00000573936 KDM1AO60341 852 aa10.77□□□□□ -0.69
CHD3-216ENST00000573936 CPNE6O95741 557 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms