RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 HES6Q96HZ4 224 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 CCDC74BQ96LY2 380 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 FCRL3Q96P31 734 aaPredicted RBP7.31□□□□□ -1.24
NUP88-205ENST00000572809 PPP1R2P1Q96PQ5 205 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 APOL2Q9BQE5 337 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 TIMM29Q9BSF4 260 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 TSGA10Q9BZW7 698 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 OSGEPL1Q9H4B0 414 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 ARNT2Q9HBZ2 717 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 CPNE7Q9UBL6 633 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 GUCA1BQ9UMX6 200 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 DNAJC16Q9Y2G8 782 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 ARL5AQ9Y689 179 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 KIF26BQ2KJY2 2108 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 FREM2Q5SZK8 3169 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 PRAMEF33A0A0G2JMD5 474 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 TEX51A0A1B0GUA7 166 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 TCRBV7S2A1N4TA0A589 114 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 PRR19A6NJB7 356 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 A8MU76 341 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 PDZK1P1A8MUH7 402 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 GAPDHSO14556 408 aaPredicted RBP7.3□□□□□ -1.24
NUP88-205ENST00000572809 ARHGAP6O43182 974 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 PSMD3O43242 534 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 DUX1O43812 170 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 PRAMEF10O60809 474 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 POP7O75817 140 aaKnown RBP7.3□□□□□ -1.24
NUP88-205ENST00000572809 METTL18O95568 372 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 B3GALT4O96024 378 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 VIPP01282 170 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 ESRRAP11474 423 aaPredicted RBP7.3□□□□□ -1.24
NUP88-205ENST00000572809 FGF3P11487 239 aaPredicted RBP7.3□□□□□ -1.24
NUP88-205ENST00000572809 CCL4P13236 92 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 MSH3P20585 1137 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 ARNTP27540 789 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 RPL10P27635 214 aaKnown RBP7.3□□□□□ -1.24
NUP88-205ENST00000572809 STIP1P31948 543 aaKnown RBP7.3□□□□□ -1.24
NUP88-205ENST00000572809 CA5AP35218 305 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 HADHAP40939 763 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 KLF1Q13351 362 aaPredicted RBP7.3□□□□□ -1.24
NUP88-205ENST00000572809 MSLNQ13421 630 aaPredicted RBP7.3□□□□□ -1.24
NUP88-205ENST00000572809 SPARCL1Q14515 664 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 GPRC6AQ5T6X5 926 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 ARHGAP40Q5TG30 622 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 DENND5AQ6IQ26 1287 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 TMEM220Q6QAJ8 160 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 WDR74Q6RFH5 385 aaPredicted RBP7.3□□□□□ -1.24
NUP88-205ENST00000572809 WASH2PQ6VEQ5 465 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 CCDC81Q6ZN84 652 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 C20orf204Q6ZNR8 217 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 ARHGEF18Q6ZSZ5 1173 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 C11orf96Q7Z7L8 435 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 AMZ2Q86W34 360 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 TRAPPC5Q8IUR0 188 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 RASGEF1AQ8N9B8 481 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 FAM71DQ8N9W8 422 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 AVL9Q8NBF6 648 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 GOLM1Q8NBJ4 401 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 AGBL5Q8NDL9 886 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 DDHD1Q8NEL9 900 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 OR4K2Q8NGD2 314 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 SLC35B2Q8TB61 432 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 NUDT8Q8WV74 236 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 EAF1Q96JC9 268 aaPredicted RBP7.3□□□□□ -1.24
NUP88-205ENST00000572809 RHOVQ96L33 236 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 TAAR9Q96RI9 348 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 UBL7Q96S82 380 aaPredicted RBP7.3□□□□□ -1.24
NUP88-205ENST00000572809 TBL1YQ9BQ87 522 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 TMEM121Q9BTD3 319 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 TBC1D10AQ9BXI6 508 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 B3GNT4Q9C0J1 378 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 EPB41L1Q9H4G0 881 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 ASB8Q9H765 288 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 CPNE5Q9HCH3 593 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 WASH6PQ9NQA3 447 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 TMEM9Q9P0T7 183 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 ZNF624Q9P2J8 865 aaPredicted RBP7.3□□□□□ -1.24
NUP88-205ENST00000572809 PDP2Q9P2J9 529 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 FEZ2Q9UHY8 353 aaPredicted RBP7.3□□□□□ -1.24
NUP88-205ENST00000572809 ACSL6Q9UKU0 697 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 KCTD3Q9Y597 815 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 CAPN6Q9Y6Q1 641 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 FAM208BQ5VWN6 2430 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 LAMA5O15230 3695 aa7.3□□□□□ -1.24
NUP88-205ENST00000572809 CFAP47Q6ZTR5 3102 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 OR2AG2A6NM03 316 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 EIF4E1BA6NMX2 242 aaKnown RBP7.29□□□□□ -1.24
NUP88-205ENST00000572809 K7ENP7 123 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 GPR39O43194 453 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 SRP72O76094 671 aaKnown RBP7.29□□□□□ -1.24
NUP88-205ENST00000572809 PRAMEF1O95521 474 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 THRAP10827 490 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 BRAFP15056 766 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 AMD1P17707 334 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 TPH1P17752 444 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 CD82P27701 267 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 CSF2RBP32927 897 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 HALP42357 657 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 MAPK9P45984 424 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 CTSCP53634 463 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms