RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 PBLDP30039 288 aaPredicted RBP8.48□□□□□ -1.05
SMG6-210ENST00000572205 AKT1P31749 480 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 TNNT3P45378 269 aaPredicted RBP8.48□□□□□ -1.05
SMG6-210ENST00000572205 SCTRP47872 440 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 PREPP48147 710 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 LEPRP48357 1165 aaKnown RBP8.48□□□□□ -1.05
SMG6-210ENST00000572205 SESN2P58004 480 aaPredicted RBP8.48□□□□□ -1.05
SMG6-210ENST00000572205 ERVPABLB-1P60509 514 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 TLE3Q04726 772 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 CCDC173Q0VFZ6 552 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 GPS1Q13098 491 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 SRSF6Q13247 344 aaKnown RBP8.48□□□□□ -1.05
SMG6-210ENST00000572205 EIF3IQ13347 325 aaKnown RBP8.48□□□□□ -1.05
SMG6-210ENST00000572205 GRB7Q14451 532 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 AMZ1Q400G9 498 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 MAP9Q49MG5 647 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 ZNF789Q5FWF6 425 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 PCID2Q5JVF3 399 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 CTSL3PQ5NE16 218 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 KIAA0930Q6ICG6 404 aaPredicted RBP8.48□□□□□ -1.05
SMG6-210ENST00000572205 TMEM71Q6P5X7 295 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 CES3Q6UWW8 571 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 C4orf22Q6V702 233 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 PPP1R21Q6ZMI0 780 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 USP53Q70EK8 1073 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 RAB11FIP2Q7L804 512 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 TMEM135Q86UB9 458 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 BPHLQ86WA6 291 aaPredicted RBP8.48□□□□□ -1.05
SMG6-210ENST00000572205 DTX1Q86Y01 620 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 VRK3Q8IV63 474 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 MCUQ8NE86 351 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 FLVCR1-AS1Q8TAF5 88 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 GDAP1Q8TB36 358 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 JPH3Q8WXH2 748 aaPredicted RBP8.48□□□□□ -1.05
SMG6-210ENST00000572205 LPGAT1Q92604 370 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 MAGOHBQ96A72 148 aaKnown RBP8.48□□□□□ -1.05
SMG6-210ENST00000572205 ZNF578Q96N58 590 aaPredicted RBP8.48□□□□□ -1.05
SMG6-210ENST00000572205 BIRC8Q96P09 236 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 IL22Q9GZX6 179 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 RAB33BQ9H082 229 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 ABCG4Q9H172 646 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 SYNDIG1Q9H7V2 258 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 EPB41L5Q9HCM4 733 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 KCNK4Q9NYG8 393 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 IL1RAPL1Q9NZN1 696 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 PSMD13Q9UNM6 376 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 CFAP20Q9Y6A4 193 aaKnown RBP8.48□□□□□ -1.05
SMG6-210ENST00000572205 HEATR5BQ9P2D3 2071 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 PDZK1P1A8MUH7 402 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.47□□□□□ -1.05
SMG6-210ENST00000572205 EFSO43281 561 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 DUX1O43812 170 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 KIF1CO43896 1103 aaKnown RBP8.47□□□□□ -1.05
SMG6-210ENST00000572205 PRAMEF10O60809 474 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 GPC4O75487 556 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 BANF1O75531 89 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 AP2A2O94973 939 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 SLC2A4P14672 509 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 WT1P19544 449 aaPredicted RBP8.47□□□□□ -1.05
SMG6-210ENST00000572205 IDSP22304 550 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 CCR7P32248 378 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 NSG1P42857 185 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 GNG11P61952 73 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 CBLBQ13191 982 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 CLN3Q13286 438 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 GTF2H3Q13889 308 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 BOP1Q14137 746 aaKnown RBP8.47□□□□□ -1.05
SMG6-210ENST00000572205 ZRANB3Q5FWF4 1079 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 ARMC3Q5W041 872 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 PCSK4Q6UW60 755 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 NAPRTQ6XQN6 538 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 CENPUQ71F23 418 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 ZNF572Q7Z3I7 529 aaPredicted RBP8.47□□□□□ -1.05
SMG6-210ENST00000572205 PRSS42Q7Z5A4 293 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 SLC9B2Q86UD5 537 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 PDZD3Q86UT5 571 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 PIM3Q86V86 326 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 RASGRP3Q8IV61 690 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 IGDCC3Q8IVU1 814 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 SPACA3Q8IXA5 215 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 UNC5BQ8IZJ1 945 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 DNAAF3Q8N9W5 541 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 PPHLN1Q8NEY8 458 aaKnown RBP8.47□□□□□ -1.05
SMG6-210ENST00000572205 OR4L1Q8NH43 312 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 GIMAP7Q8NHV1 300 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 SNRNP27Q8WVK2 155 aaKnown RBP8.47□□□□□ -1.05
SMG6-210ENST00000572205 PPM1MQ96MI6 270 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 TMEM74Q96NL1 305 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 NAPGQ99747 312 aaPredicted RBP8.47□□□□□ -1.05
SMG6-210ENST00000572205 TRIM51Q9BSJ1 452 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 KIR3DX1Q9H7L2 352 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 OCIAD1Q9NX40 245 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 EPHA6Q9UF33 1036 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 SLC24A2Q9UI40 661 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 RALYQ9UKM9 306 aaKnown RBP8.47□□□□□ -1.05
SMG6-210ENST00000572205 PCDHGA3Q9Y5H0 932 aa8.47□□□□□ -1.05
SMG6-210ENST00000572205 MDC1Q14676 2089 aaKnown RBP8.46□□□□□ -1.05
SMG6-210ENST00000572205 FAM237BA0A1B0GVD1 139 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 KLHL33A6NCF5 533 aa8.46□□□□□ -1.06
SMG6-210ENST00000572205 OR5K3A6NET4 321 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms