RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 COL8A1P27658 744 aa18.46■□□□□ 0.55
SCARF1-204ENST00000570902 ARCN1P48444 511 aaKnown RBP18.46■□□□□ 0.55
SCARF1-204ENST00000570902 ATP1A4Q13733 1029 aa18.46■□□□□ 0.55
SCARF1-204ENST00000570902 GSE1Q14687 1217 aa18.46■□□□□ 0.55
SCARF1-204ENST00000570902 PRKD1Q15139 912 aaPredicted RBP18.46■□□□□ 0.55
SCARF1-204ENST00000570902 NOMO1Q15155 1222 aa18.46■□□□□ 0.55
SCARF1-204ENST00000570902 ZRANB3Q5FWF4 1079 aa18.46■□□□□ 0.55
SCARF1-204ENST00000570902 FAM69BQ5VUD6 431 aa18.46■□□□□ 0.55
SCARF1-204ENST00000570902 FBXO38Q6PIJ6 1188 aa18.46■□□□□ 0.55
SCARF1-204ENST00000570902 KDELC1Q6UW63 502 aa18.46■□□□□ 0.55
SCARF1-204ENST00000570902 B4GALNT4Q76KP1 1039 aa18.46■□□□□ 0.55
SCARF1-204ENST00000570902 DET1Q7L5Y6 550 aa18.46■□□□□ 0.55
SCARF1-204ENST00000570902 SLC25A41Q8N5S1 370 aa18.46■□□□□ 0.55
SCARF1-204ENST00000570902 OR4E2Q8NGC2 313 aa18.46■□□□□ 0.55
SCARF1-204ENST00000570902 OR1L3Q8NH93 324 aa18.46■□□□□ 0.55
SCARF1-204ENST00000570902 BLOC1S5Q8TDH9 187 aa18.46■□□□□ 0.55
SCARF1-204ENST00000570902 C19orf60Q96EN9 201 aa18.46■□□□□ 0.55
SCARF1-204ENST00000570902 TCTN2Q96GX1 697 aa18.46■□□□□ 0.55
SCARF1-204ENST00000570902 PPM1MQ96MI6 270 aa18.46■□□□□ 0.55
SCARF1-204ENST00000570902 CCM2Q9BSQ5 444 aa18.46■□□□□ 0.55
SCARF1-204ENST00000570902 DHRS4Q9BTZ2 278 aa18.46■□□□□ 0.55
SCARF1-204ENST00000570902 B3GNT3Q9Y2A9 372 aa18.46■□□□□ 0.55
SCARF1-204ENST00000570902 CENPEQ02224 2701 aa18.45■□□□□ 0.54
SCARF1-204ENST00000570902 KRT86O43790 486 aa18.45■□□□□ 0.54
SCARF1-204ENST00000570902 LCA5LO95447 670 aa18.45■□□□□ 0.54
SCARF1-204ENST00000570902 CBX6O95503 412 aa18.45■□□□□ 0.54
SCARF1-204ENST00000570902 KRT1P04264 644 aa18.45■□□□□ 0.54
SCARF1-204ENST00000570902 HBQ1P09105 142 aa18.45■□□□□ 0.54
SCARF1-204ENST00000570902 CA5AP35218 305 aa18.45■□□□□ 0.54
SCARF1-204ENST00000570902 HADHAP40939 763 aa18.45■□□□□ 0.54
SCARF1-204ENST00000570902 NR2C2P49116 596 aa18.45■□□□□ 0.54
SCARF1-204ENST00000570902 DYNLT1P63172 113 aa18.45■□□□□ 0.54
SCARF1-204ENST00000570902 ELOAQ14241 798 aaKnown RBP18.45■□□□□ 0.54
SCARF1-204ENST00000570902 SLC1A5Q15758 541 aa18.45■□□□□ 0.54
SCARF1-204ENST00000570902 PLEKHN1Q494U1 663 aaPredicted RBP18.45■□□□□ 0.54
SCARF1-204ENST00000570902 BCL7AQ4VC05 210 aa18.45■□□□□ 0.54
SCARF1-204ENST00000570902 ZNF789Q5FWF6 425 aa18.45■□□□□ 0.54
SCARF1-204ENST00000570902 RNF214Q8ND24 703 aa18.45■□□□□ 0.54
SCARF1-204ENST00000570902 ACVR1CQ8NER5 493 aa18.45■□□□□ 0.54
SCARF1-204ENST00000570902 SPDYE1Q8NFV5 336 aaPredicted RBP18.45■□□□□ 0.54
SCARF1-204ENST00000570902 ZNF398Q8TD17 642 aa18.45■□□□□ 0.54
SCARF1-204ENST00000570902 TFB1MQ8WVM0 346 aaKnown RBP18.45■□□□□ 0.54
SCARF1-204ENST00000570902 LINC00615Q96LM1 132 aaPredicted RBP18.45■□□□□ 0.54
SCARF1-204ENST00000570902 FER1L6-AS2Q96M78 137 aa18.45■□□□□ 0.54
SCARF1-204ENST00000570902 C17orf62Q9BQA9 187 aa18.45■□□□□ 0.54
SCARF1-204ENST00000570902 SRMSQ9H3Y6 488 aa18.45■□□□□ 0.54
SCARF1-204ENST00000570902 HIVEP3Q5T1R4 2406 aa18.44■□□□□ 0.54
SCARF1-204ENST00000570902 GSAPA4D1B5 854 aa18.44■□□□□ 0.54
SCARF1-204ENST00000570902 E7EQ34 232 aa18.44■□□□□ 0.54
SCARF1-204ENST00000570902 GAPDHSO14556 408 aaPredicted RBP18.44■□□□□ 0.54
SCARF1-204ENST00000570902 STX7O15400 261 aaKnown RBP18.44■□□□□ 0.54
SCARF1-204ENST00000570902 PRAMEF1O95521 474 aa18.44■□□□□ 0.54
SCARF1-204ENST00000570902 IGHEP01854 428 aa18.44■□□□□ 0.54
SCARF1-204ENST00000570902 TPM3P06753 285 aa18.44■□□□□ 0.54
SCARF1-204ENST00000570902 TMEM253P0C7T8 217 aa18.44■□□□□ 0.54
SCARF1-204ENST00000570902 NFKB1P19838 968 aa18.44■□□□□ 0.54
SCARF1-204ENST00000570902 CD68P34810 354 aaPredicted RBP18.44■□□□□ 0.54
SCARF1-204ENST00000570902 ARHGAP25P42331 645 aa18.44■□□□□ 0.54
SCARF1-204ENST00000570902 CHRNA4P43681 627 aa18.44■□□□□ 0.54
SCARF1-204ENST00000570902 RAPSNQ13702 412 aa18.44■□□□□ 0.54
SCARF1-204ENST00000570902 SLC18A3Q16572 532 aa18.44■□□□□ 0.54
SCARF1-204ENST00000570902 KYNUQ16719 465 aa18.44■□□□□ 0.54
SCARF1-204ENST00000570902 LRRC38Q5VT99 294 aa18.44■□□□□ 0.54
SCARF1-204ENST00000570902 LYPLAL1Q5VWZ2 237 aa18.44■□□□□ 0.54
SCARF1-204ENST00000570902 TICAM1Q8IUC6 712 aa18.44■□□□□ 0.54
SCARF1-204ENST00000570902 LCN9Q8WX39 176 aa18.44■□□□□ 0.54
SCARF1-204ENST00000570902 MRGPRX2Q96LB1 330 aa18.44■□□□□ 0.54
SCARF1-204ENST00000570902 PACSIN1Q9BY11 444 aa18.44■□□□□ 0.54
SCARF1-204ENST00000570902 ASF1BQ9NVP2 202 aa18.44■□□□□ 0.54
SCARF1-204ENST00000570902 FAM8A1Q9UBU6 413 aa18.44■□□□□ 0.54
SCARF1-204ENST00000570902 CACNA1DQ01668 2161 aa18.43■□□□□ 0.54
SCARF1-204ENST00000570902 ANKUB1A6NFN9 424 aa18.43■□□□□ 0.54
SCARF1-204ENST00000570902 DDX3YO15523 660 aaKnown RBP18.43■□□□□ 0.54
SCARF1-204ENST00000570902 BUD23O43709 281 aaKnown RBP18.43■□□□□ 0.54
SCARF1-204ENST00000570902 GYPCP04921 128 aa18.43■□□□□ 0.54
SCARF1-204ENST00000570902 PRDX3P30048 256 aaKnown RBP18.43■□□□□ 0.54
SCARF1-204ENST00000570902 OTX2P32243 289 aa18.43■□□□□ 0.54
SCARF1-204ENST00000570902 WASHC5Q12768 1159 aa18.43■□□□□ 0.54
SCARF1-204ENST00000570902 PTCHD3Q3KNS1 767 aa18.43■□□□□ 0.54
SCARF1-204ENST00000570902 IGFL3Q6UXB1 125 aa18.43■□□□□ 0.54
SCARF1-204ENST00000570902 CFAP206Q8IYR0 622 aa18.43■□□□□ 0.54
SCARF1-204ENST00000570902 CISD2Q8N5K1 135 aaKnown RBP18.43■□□□□ 0.54
SCARF1-204ENST00000570902 TTC13Q8NBP0 860 aa18.43■□□□□ 0.54
SCARF1-204ENST00000570902 CLEC1AQ8NC01 280 aa18.43■□□□□ 0.54
SCARF1-204ENST00000570902 TM9SF4Q92544 642 aa18.43■□□□□ 0.54
SCARF1-204ENST00000570902 RMDN2Q96LZ7 410 aa18.43■□□□□ 0.54
SCARF1-204ENST00000570902 FCRL5Q96RD9 977 aa18.43■□□□□ 0.54
SCARF1-204ENST00000570902 VAT1Q99536 393 aa18.43■□□□□ 0.54
SCARF1-204ENST00000570902 ANP32EQ9BTT0 268 aa18.43■□□□□ 0.54
SCARF1-204ENST00000570902 PITPNM3Q9BZ71 974 aa18.43■□□□□ 0.54
SCARF1-204ENST00000570902 ILKAPQ9H0C8 392 aaPredicted RBP18.43■□□□□ 0.54
SCARF1-204ENST00000570902 DDX56Q9NY93 547 aaKnown RBP18.43■□□□□ 0.54
SCARF1-204ENST00000570902 KLHL8Q9P2G9 620 aaPredicted RBP18.43■□□□□ 0.54
SCARF1-204ENST00000570902 CELSR2Q9HCU4 2923 aa18.43■□□□□ 0.54
SCARF1-204ENST00000570902 PEX12O00623 359 aa18.42■□□□□ 0.54
SCARF1-204ENST00000570902 CBFA2T2O43439 604 aa18.42■□□□□ 0.54
SCARF1-204ENST00000570902 IPO13O94829 963 aaKnown RBP18.42■□□□□ 0.54
SCARF1-204ENST00000570902 POLBP06746 335 aa18.42■□□□□ 0.54
SCARF1-204ENST00000570902 CD63P08962 238 aa18.42■□□□□ 0.54
SCARF1-204ENST00000570902 RALBP11234 206 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms