RNA–Protein interactions for RNA: ENST00000570845.5

ATP2A3-208, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, human

TSL 1 (best)

Gene ATP2A3, Length 604 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2A3-208	ENST00000570845	LRRC4C	Q9HCJ2	640 aa		11.31	□□□□□ -0.6
ATP2A3-208	ENST00000570845	SMYD2	Q9NRG4	433 aa		11.31	□□□□□ -0.6
ATP2A3-208	ENST00000570845	POT1	Q9NUX5	634 aa		11.31	□□□□□ -0.6
ATP2A3-208	ENST00000570845	NSMCE4A	Q9NXX6	385 aa		11.31	□□□□□ -0.6
ATP2A3-208	ENST00000570845	COMMD10	Q9Y6G5	202 aa		11.31	□□□□□ -0.6
ATP2A3-208	ENST00000570845	CCDC88C	Q9P219	2028 aa		11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	PRAMEF33	A0A0G2JMD5	474 aa		11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	IFRD1	O00458	451 aa	Predicted RBP	11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	CASC3	O15234	703 aa	Known RBP	11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	ZW10	O43264	779 aa		11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	SPAG6	O75602	509 aa		11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	PIAS1	O75925	651 aa		11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	AHSG	P02765	367 aa		11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	RPLP0	P05388	317 aa	Known RBP	11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	GABRB3	P28472	473 aa		11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	ALDH4A1	P30038	563 aa		11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	STX2	P32856	288 aa		11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	GPR3	P46089	330 aa		11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	CD151	P48509	253 aa		11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	PPM1F	P49593	454 aa	Predicted RBP	11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	CLDN6	P56747	220 aa		11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	OR1D5	P58170	312 aa		11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	CCL7	P80098	99 aa		11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	INSM1	Q01101	510 aa	Predicted RBP	11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	PLOD1	Q02809	727 aa	Predicted RBP	11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	FOXC1	Q12948	553 aa		11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	KYNU	Q16719	465 aa		11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	RBM20	Q5T481	1227 aa	Known RBP	11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	STRA8	Q7Z7C7	330 aa		11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	GALNT7	Q86SF2	657 aa		11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	SLC26A11	Q86WA9	606 aa		11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	VRK3	Q8IV63	474 aa		11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	FBF1	Q8TES7	1133 aa		11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	ADAMTS14	Q8WXS8	1223 aa		11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	CDKL2	Q92772	493 aa		11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	ATXN7L3B	Q96GX2	97 aa		11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	NDN	Q99608	321 aa		11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	SLC38A3	Q99624	504 aa		11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	AARSD1	Q9BTE6	412 aa	Known RBP	11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	CDC42EP4	Q9H3Q1	356 aa	Known RBP	11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	SLC40A1	Q9NP59	571 aa		11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	KCNK4	Q9NYG8	393 aa		11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	NINJ2	Q9NZG7	142 aa		11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	GALP	Q9UBC7	116 aa		11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	HEBP2	Q9Y5Z4	205 aa		11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845	PSAT1	Q9Y617	370 aa		11.3	□□□□□ -0.6
ATP2A3-208	ENST00000570845		A0A1W2PQM1	296 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	LILRA5	A6NI73	299 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	FAM159B	A6NKW6	160 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	CXorf49	A8MYA2	514 aa	Predicted RBP	11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	VPS26A	O75436	327 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	GPC4	O75487	556 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	MAPK9	P45984	424 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	CLCN7	P51798	805 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	TUBB4B	P68371	445 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	SPIDR	Q14159	915 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	GPR18	Q14330	331 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	KRT33B	Q14525	404 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	KBTBD12	Q3ZCT8	623 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	AMZ1	Q400G9	498 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	PLEKHS1	Q5SXH7	462 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	HES3	Q5TGS1	186 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	TMEM26	Q6ZUK4	368 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	CYS1	Q717R9	158 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	RAB44	Q7Z6P3	723 aa	Predicted RBP	11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	RELL1	Q8IUW5	271 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	CTAGE3P	Q8IX95	158 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	RBM12B	Q8IXT5	1001 aa	Known RBP	11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	GSPT2	Q8IYD1	628 aa	Known RBP	11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	SLC22A15	Q8IZD6	547 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	CHCHD4	Q8N4Q1	142 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	ZBTB2	Q8N680	514 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	GPATCH11	Q8N954	259 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	SIDT2	Q8NBJ9	832 aa	Known RBP	11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	PHC3	Q8NDX5	983 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	OR10G6	Q8NH81	332 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	WDR48	Q8TAF3	677 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	KCNJ9	Q92806	393 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	AHCYL2	Q96HN2	611 aa	Known RBP	11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	FERD3L	Q96RJ6	166 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	GFM1	Q96RP9	751 aa	Known RBP	11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	GPR21	Q99679	349 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	TBC1D10A	Q9BXI6	508 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	ZMYND15	Q9H091	742 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	LRRN3	Q9H3W5	708 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	ANKZF1	Q9H8Y5	726 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	LATS2	Q9NRM7	1088 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	TXNDC16	Q9P2K2	825 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	TSR3	Q9UJK0	312 aa	Known RBP	11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	CORO1C	Q9ULV4	474 aa	Predicted RBP	11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	CDYL	Q9Y232	598 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	COLEC10	Q9Y6Z7	277 aa		11.29	□□□□□ -0.6
ATP2A3-208	ENST00000570845	IGHV1OR21-1	A0A087WYE8	117 aa		11.28	□□□□□ -0.6
ATP2A3-208	ENST00000570845	NTN3	O00634	580 aa	Predicted RBP	11.28	□□□□□ -0.6
ATP2A3-208	ENST00000570845	B4GAT1	O43505	415 aa		11.28	□□□□□ -0.6
ATP2A3-208	ENST00000570845	HYAL3	O43820	417 aa	Predicted RBP	11.28	□□□□□ -0.6
ATP2A3-208	ENST00000570845	SLCO2B1	O94956	709 aa		11.28	□□□□□ -0.6
ATP2A3-208	ENST00000570845	ACSL3	O95573	720 aa		11.28	□□□□□ -0.6
ATP2A3-208	ENST00000570845	ADRB1	P08588	477 aa		11.28	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms