RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 HAPLN1P10915 354 aaPredicted RBP6.56□□□□□ -1.36
SMG1-217ENST00000569764 IL11P20809 199 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 HSPA9P38646 679 aaKnown RBP6.56□□□□□ -1.36
SMG1-217ENST00000569764 GCLMP48507 274 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 SUOXP51687 545 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 VAV2P52735 878 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 SNRPD1P62314 119 aaKnown RBP6.56□□□□□ -1.36
SMG1-217ENST00000569764 CYP4F2P78329 520 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 EFEMP1Q12805 493 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 TEAD2Q15562 447 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 TARBP2Q15633 366 aaKnown RBP6.56□□□□□ -1.36
SMG1-217ENST00000569764 TIGD7Q6NT04 549 aaPredicted RBP6.56□□□□□ -1.36
SMG1-217ENST00000569764 KIAA2013Q8IYS2 634 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 SCML4Q8N228 414 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 ZNF786Q8N393 782 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 HIPK4Q8NE63 616 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 OR52M1Q8NGK5 317 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.56□□□□□ -1.36
SMG1-217ENST00000569764 SEC14L1Q92503 715 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 DGCR14Q96DF8 476 aaKnown RBP6.56□□□□□ -1.36
SMG1-217ENST00000569764 MS4A14Q96JA4 679 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 CAPZA3Q96KX2 299 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.56□□□□□ -1.36
SMG1-217ENST00000569764 SLC26A1Q9H2B4 701 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 ST6GALNAC4Q9H4F1 302 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 EPS8L2Q9H6S3 715 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 ZC4H2Q9NQZ6 224 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 REV1Q9UBZ9 1251 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 CIDEBQ9UHD4 219 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 LNPEPQ9UIQ6 1025 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 GAB2Q9UQC2 676 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 CLPXO76031 633 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 KRT75O95678 551 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 CRYZL1O95825 349 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 ARL4CP56559 192 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 IFFO1Q0D2I5 559 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 HSPA14Q0VDF9 509 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 TRA2AQ13595 282 aaKnown RBP eCLIP6.56□□□□□ -1.36
SMG1-217ENST00000569764 VWA5B1Q5TIE3 1220 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 PRAMEF20Q5VT98 475 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 C9orf57Q5W0N0 161 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 WSCD1Q658N2 575 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 TAS2R42Q7RTR8 314 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 SYT12Q8IV01 421 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 SLC44A3Q8N4M1 653 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 SLC20A1Q8WUM9 679 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 PHF21AQ96BD5 680 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 CEP19Q96LK0 163 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 NSMCE3Q96MG7 304 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 PRRG3Q9BZD7 231 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 TMEM245Q9H330 911 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 POMKQ9H5K3 350 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 WDR26Q9H7D7 661 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 FAM53CQ9NYF3 392 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 RPH3ALQ9UNE2 315 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 CHKBQ9Y259 395 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 TRIP11Q15643 1979 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 TBC1D3DA0A087WVF3 549 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 TBC1D3IA0A087WXS9 549 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 TBC1D3EA0A087X179 549 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 TBC1D3KA0A087X1G2 549 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 TBC1D3FA6NER0 549 aaPredicted RBP6.56□□□□□ -1.36
SMG1-217ENST00000569764 C2CD4DB7Z1M9 353 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 TBC1D3LB9A6J9 549 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 FAM227AF5H4B4 570 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 PIP5K1BO14986 540 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 CAPN5O15484 640 aaPredicted RBP6.56□□□□□ -1.36
SMG1-217ENST00000569764 EPHX1P07099 455 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 CD63P08962 238 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 TBC1D3HP0C7X1 549 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 NPR3P17342 541 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 MAGP20916 626 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 SLC7A2P52569 658 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 RAD23BP54727 409 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 ERVFC1P60507 584 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 MGAT3Q09327 533 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 FOXO1Q12778 655 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 ZNF284Q2VY69 593 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 CDONQ4KMG0 1287 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 ATG16L1Q676U5 607 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 TBC1D3GQ6DHY5 549 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 TBC1D3CQ6IPX1 549 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 DNAJC24Q6P3W2 148 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 ETFBKMTQ8IXQ9 262 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 TBC1D3Q8IZP1 549 aaPredicted RBP6.56□□□□□ -1.36
SMG1-217ENST00000569764 FRMD1Q8N878 549 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 CASKIN2Q8WXE0 1202 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 AZIN2Q96A70 460 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 FER1L6-AS2Q96M78 137 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 NDNQ99608 321 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 DPYSL5Q9BPU6 564 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 TLR10Q9BXR5 811 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 MAGEB5Q9BZ81 275 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 CHRDQ9H2X0 955 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 LRRC19Q9H756 370 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 C12orf10Q9HB07 376 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 USP29Q9HBJ7 922 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 IGKV6-21A0A0C4DH24 114 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.55□□□□□ -1.36
SMG1-217ENST00000569764 OR2AG2A6NM03 316 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms