RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 CCDC66A2RUB6 948 aa13.48□□□□□ -0.25
GTF3C1-211ENST00000569653 C2orf81A6NN90 581 aa13.48□□□□□ -0.25
GTF3C1-211ENST00000569653 BTN3A3O00478 584 aa13.48□□□□□ -0.25
GTF3C1-211ENST00000569653 KATNA1O75449 491 aa13.48□□□□□ -0.25
GTF3C1-211ENST00000569653 DNAJB5O75953 348 aa13.48□□□□□ -0.25
GTF3C1-211ENST00000569653 PDHA2P29803 388 aa13.48□□□□□ -0.25
GTF3C1-211ENST00000569653 MC4RP32245 332 aa13.48□□□□□ -0.25
GTF3C1-211ENST00000569653 TNNT3P45378 269 aaPredicted RBP13.48□□□□□ -0.25
GTF3C1-211ENST00000569653 GPS2Q13227 327 aa13.48□□□□□ -0.25
GTF3C1-211ENST00000569653 IL10RAQ13651 578 aa13.48□□□□□ -0.25
GTF3C1-211ENST00000569653 IGFBP7Q16270 282 aa13.48□□□□□ -0.25
GTF3C1-211ENST00000569653 ZNF789Q5FWF6 425 aa13.48□□□□□ -0.25
GTF3C1-211ENST00000569653 DNTTIP2Q5QJE6 756 aaKnown RBP13.48□□□□□ -0.25
GTF3C1-211ENST00000569653 FAM69BQ5VUD6 431 aa13.48□□□□□ -0.25
GTF3C1-211ENST00000569653 CFAP206Q8IYR0 622 aa13.48□□□□□ -0.25
GTF3C1-211ENST00000569653 TAB3Q8N5C8 712 aaPredicted RBP13.48□□□□□ -0.25
GTF3C1-211ENST00000569653 CLDN19Q8N6F1 224 aa13.48□□□□□ -0.25
GTF3C1-211ENST00000569653 FAM71DQ8N9W8 422 aa13.48□□□□□ -0.25
GTF3C1-211ENST00000569653 SLC35B2Q8TB61 432 aa13.48□□□□□ -0.25
GTF3C1-211ENST00000569653 ZNF501Q96CX3 271 aaPredicted RBP13.48□□□□□ -0.25
GTF3C1-211ENST00000569653 ZNF514Q96K75 400 aaPredicted RBP13.48□□□□□ -0.25
GTF3C1-211ENST00000569653 DESI2Q9BSY9 194 aa13.48□□□□□ -0.25
GTF3C1-211ENST00000569653 EFHD1Q9BUP0 239 aa13.48□□□□□ -0.25
GTF3C1-211ENST00000569653 TRIM55Q9BYV6 548 aa13.48□□□□□ -0.25
GTF3C1-211ENST00000569653 OR52A5Q9H2C5 316 aa13.48□□□□□ -0.25
GTF3C1-211ENST00000569653 ACTL8Q9H568 366 aa13.48□□□□□ -0.25
GTF3C1-211ENST00000569653 COG4Q9H9E3 785 aa13.48□□□□□ -0.25
GTF3C1-211ENST00000569653 CRLS1Q9UJA2 301 aa13.48□□□□□ -0.25
GTF3C1-211ENST00000569653 RARRES3Q9UL19 164 aa13.48□□□□□ -0.25
GTF3C1-211ENST00000569653 ACSL5Q9ULC5 683 aa13.48□□□□□ -0.25
GTF3C1-211ENST00000569653 TP53TG5Q9Y2B4 290 aa13.48□□□□□ -0.25
GTF3C1-211ENST00000569653 AAR2Q9Y312 384 aaKnown RBP13.48□□□□□ -0.25
GTF3C1-211ENST00000569653 PRSS21Q9Y6M0 314 aa13.48□□□□□ -0.25
GTF3C1-211ENST00000569653 SHANK1Q9Y566 2161 aa13.47□□□□□ -0.25
GTF3C1-211ENST00000569653 CCDC78A2IDD5 438 aa13.47□□□□□ -0.25
GTF3C1-211ENST00000569653 CDC14CA4D256 554 aa13.47□□□□□ -0.25
GTF3C1-211ENST00000569653 CREG1O75629 220 aa13.47□□□□□ -0.25
GTF3C1-211ENST00000569653 FTCDO95954 541 aa13.47□□□□□ -0.25
GTF3C1-211ENST00000569653 SLC35G4P0C7Q5 338 aa13.47□□□□□ -0.25
GTF3C1-211ENST00000569653 POLR2CP19387 275 aaPredicted RBP13.47□□□□□ -0.25
GTF3C1-211ENST00000569653 PREPP48147 710 aa13.47□□□□□ -0.25
GTF3C1-211ENST00000569653 ABRQ12979 859 aa13.47□□□□□ -0.25
GTF3C1-211ENST00000569653 CPZQ66K79 652 aa13.47□□□□□ -0.25
GTF3C1-211ENST00000569653 SNX20Q7Z614 316 aa13.47□□□□□ -0.25
GTF3C1-211ENST00000569653 SERPINA9Q86WD7 417 aa13.47□□□□□ -0.25
GTF3C1-211ENST00000569653 OOSP2Q86WS3 158 aa13.47□□□□□ -0.25
GTF3C1-211ENST00000569653 SYCE1Q8N0S2 351 aa13.47□□□□□ -0.25
GTF3C1-211ENST00000569653 PHC3Q8NDX5 983 aa13.47□□□□□ -0.25
GTF3C1-211ENST00000569653 OR4E2Q8NGC2 313 aa13.47□□□□□ -0.25
GTF3C1-211ENST00000569653 HM13Q8TCT9 377 aa13.47□□□□□ -0.25
GTF3C1-211ENST00000569653 CD180Q99467 661 aa13.47□□□□□ -0.25
GTF3C1-211ENST00000569653 POMT2Q9UKY4 750 aa13.47□□□□□ -0.25
GTF3C1-211ENST00000569653 PADI1Q9ULC6 663 aa13.47□□□□□ -0.25
GTF3C1-211ENST00000569653 BTRCQ9Y297 605 aa13.47□□□□□ -0.25
GTF3C1-211ENST00000569653 CAPN6Q9Y6Q1 641 aa13.47□□□□□ -0.25
GTF3C1-211ENST00000569653 SPTAN1Q13813 2472 aaKnown RBP13.47□□□□□ -0.25
GTF3C1-211ENST00000569653 OR51F1A6NGY5 319 aa13.46□□□□□ -0.25
GTF3C1-211ENST00000569653 SLC9B1P1A6NJY1 282 aa13.46□□□□□ -0.25
GTF3C1-211ENST00000569653 BTN3A1O00481 513 aa13.46□□□□□ -0.25
GTF3C1-211ENST00000569653 ARHGAP6O43182 974 aa13.46□□□□□ -0.25
GTF3C1-211ENST00000569653 TJP3O95049 919 aa13.46□□□□□ -0.25
GTF3C1-211ENST00000569653 CRTAMO95727 393 aa13.46□□□□□ -0.25
GTF3C1-211ENST00000569653 TPBGLP0DKB5 382 aa13.46□□□□□ -0.25
GTF3C1-211ENST00000569653 ATP1B2P14415 290 aaPredicted RBP13.46□□□□□ -0.25
GTF3C1-211ENST00000569653 PVRP15151 417 aa13.46□□□□□ -0.25
GTF3C1-211ENST00000569653 ITGALP20701 1170 aa13.46□□□□□ -0.25
GTF3C1-211ENST00000569653 PSMA3P25788 255 aa13.46□□□□□ -0.25
GTF3C1-211ENST00000569653 ACRV1P26436 265 aa13.46□□□□□ -0.25
GTF3C1-211ENST00000569653 CASRP41180 1078 aa13.46□□□□□ -0.25
GTF3C1-211ENST00000569653 CETN2P41208 172 aa13.46□□□□□ -0.25
GTF3C1-211ENST00000569653 HSD11B2P80365 405 aa13.46□□□□□ -0.25
GTF3C1-211ENST00000569653 MC1RQ01726 317 aa13.46□□□□□ -0.25
GTF3C1-211ENST00000569653 SRSF1Q07955 248 aaKnown RBP eCLIP13.46□□□□□ -0.252e-7■■■□□ 19.1
GTF3C1-211ENST00000569653 GSE1Q14687 1217 aa13.46□□□□□ -0.25
GTF3C1-211ENST00000569653 POU6F1Q14863 301 aa13.46□□□□□ -0.25
GTF3C1-211ENST00000569653 DBN1Q16643 649 aa13.46□□□□□ -0.25
GTF3C1-211ENST00000569653 ZNF517Q6ZMY9 492 aaPredicted RBP13.46□□□□□ -0.25
GTF3C1-211ENST00000569653 PRUNE1Q86TP1 453 aa13.46□□□□□ -0.25
GTF3C1-211ENST00000569653 KMT5CQ86Y97 462 aa13.46□□□□□ -0.25
GTF3C1-211ENST00000569653 ATG4AQ8WYN0 398 aa13.46□□□□□ -0.25
GTF3C1-211ENST00000569653 COPS8Q99627 209 aa13.46□□□□□ -0.25
GTF3C1-211ENST00000569653 TMEM121Q9BTD3 319 aa13.46□□□□□ -0.25
GTF3C1-211ENST00000569653 TLR10Q9BXR5 811 aa13.46□□□□□ -0.25
GTF3C1-211ENST00000569653 TSGA10Q9BZW7 698 aa13.46□□□□□ -0.25
GTF3C1-211ENST00000569653 KLHL25Q9H0H3 589 aa13.46□□□□□ -0.25
GTF3C1-211ENST00000569653 PDE7BQ9NP56 450 aa13.46□□□□□ -0.25
GTF3C1-211ENST00000569653 NLE1Q9NVX2 485 aaPredicted RBP13.46□□□□□ -0.25
GTF3C1-211ENST00000569653 ZDHHC3Q9NYG2 299 aa13.46□□□□□ -0.25
GTF3C1-211ENST00000569653 TLK1Q9UKI8 766 aa13.46□□□□□ -0.25
GTF3C1-211ENST00000569653 ANKRD12Q6UB98 2062 aa13.45□□□□□ -0.26
GTF3C1-211ENST00000569653 UBA6A0AVT1 1052 aaPredicted RBP13.45□□□□□ -0.26
GTF3C1-211ENST00000569653 MROH6A6NGR9 719 aa13.45□□□□□ -0.26
GTF3C1-211ENST00000569653 H7C0S8 307 aa13.45□□□□□ -0.26
GTF3C1-211ENST00000569653 HCRTR1O43613 425 aa13.45□□□□□ -0.26
GTF3C1-211ENST00000569653 ST6GAL1P15907 406 aa13.45□□□□□ -0.26
GTF3C1-211ENST00000569653 PMS2P54278 862 aa13.45□□□□□ -0.26
GTF3C1-211ENST00000569653 TUBB4BP68371 445 aa13.45□□□□□ -0.26
GTF3C1-211ENST00000569653 FOXK1P85037 733 aa13.45□□□□□ -0.26
GTF3C1-211ENST00000569653 ACY1Q03154 408 aa13.45□□□□□ -0.26
GTF3C1-211ENST00000569653 CHAF1BQ13112 559 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms