RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 CBSP35520 551 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 IL15P40933 162 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 BLKP51451 505 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 CDH15P55291 814 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 GSTO1P78417 241 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 WASHC5Q12768 1159 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 PPIGQ13427 754 aaKnown RBP eCLIP3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 IRF3Q14653 427 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 KYNUQ16719 465 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 ESCO2Q56NI9 601 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 TYW3Q6IPR3 259 aaKnown RBP3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 C16orf82Q7Z2V1 217 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 FAM160B2Q86V87 743 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 OR8H3Q8N146 312 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 AADATQ8N5Z0 425 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 NAT8LQ8N9F0 302 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 SCFD2Q8WU76 684 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 FAM216AQ8WUB2 273 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 KIF1BPQ96EK5 621 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 DYNLL2Q96FJ2 89 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 TXNDC15Q96J42 360 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 TM6SF1Q9BZW5 370 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 PIH1D3Q9NQM4 214 aaKnown RBP3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 BEX4Q9NWD9 120 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 KCND2Q9NZV8 630 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 C5AR2Q9P296 337 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 CTNNAL1Q9UBT7 734 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 TBX21Q9UL17 535 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 TNNQ9UQP3 1299 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 KMT2EQ8IZD2 1858 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 TANC1Q9C0D5 1861 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 IL16Q14005 1332 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 MYH7P12883 1935 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 TET1Q8NFU7 2136 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 PRRC2BQ5JSZ5 2229 aaKnown RBP3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 A0A0U1RQF3 1178 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 GTPBP10A4D1E9 387 aaKnown RBP3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 GAGE10A6NGK3 116 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 LIPT2A6NK58 231 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 TEX22C9J3V5 150 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 PI4K2BG5E9Z4 385 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 KLK8O60259 260 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 TBX10O75333 385 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 TBCAO75347 108 aaKnown RBP3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 SERPINI2O75830 405 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 IDH1O75874 414 aaKnown RBP3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 CIAO1O76071 339 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 RGS11O94810 467 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 CSPG5O95196 566 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 OR2C1O95371 312 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 VNN2O95498 520 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 BAG3O95817 575 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 SNAI1O95863 264 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 TFPIP10646 304 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 SHMT1P34896 483 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 ATP6V1E1P36543 226 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 PPARGP37231 505 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 PIGAP37287 484 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 PBX3P40426 434 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 COMPP49747 757 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 ART1P52961 327 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 RAD23AP54725 363 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 BPIFB3P59826 476 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 EFNB1P98172 346 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 ST3GAL1Q11201 340 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 TMEM115Q12893 351 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 PRPF4BQ13523 1007 aaKnown RBP3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 MVPQ14764 893 aaKnown RBP3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 SOWAHAQ2M3V2 549 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 SLC9B1Q4ZJI4 515 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 SETMARQ53H47 684 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 ZNF766Q5HY98 468 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 GARNL3Q5VVW2 1013 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 C9orf57Q5W0N0 161 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 CAPRIN2Q6IMN6 1127 aaKnown RBP3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 LRRC8EQ6NSJ5 796 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 CES5AQ6NT32 575 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 TATDN1Q6P1N9 297 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 CXCL17Q6UXB2 119 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 C18orf65Q6ZTR6 163 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 ANKRD33Q7Z3H0 272 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 SLFN11Q7Z7L1 901 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 TBC1D26Q86UD7 250 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 NOXA1Q86UR1 476 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 LINC00346Q8IVM7 164 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 WDR63Q8IWG1 891 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 SFTPA2Q8IWL1 248 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 CCDC105Q8IYK2 499 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 KIAA2013Q8IYS2 634 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 ZBTB8BQ8NAP8 495 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 MSANTD4Q8NCY6 345 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 KLHDC9Q8NEP7 349 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 SNAPC3Q92966 411 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 ERGIC1Q969X5 290 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 TBC1D31Q96DN5 1066 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 CCDC34Q96HJ3 373 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 LMLNQ96KR4 655 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 C12orf42Q96LP6 360 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 GLT1D1Q96MS3 346 aa3.35□□□□□ -1.87
HMGB1P6-201ENST00000569046 FIZ1Q96SL8 496 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms