RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 IZUMO3Q5VZ72 239 aa13.3□□□□□ -0.28
CNOT1-215ENST00000569020 CAPRIN2Q6IMN6 1127 aaKnown RBP13.3□□□□□ -0.28
CNOT1-215ENST00000569020 CDKL3Q8IVW4 592 aaPredicted RBP13.3□□□□□ -0.28
CNOT1-215ENST00000569020 ACVR1CQ8NER5 493 aa13.3□□□□□ -0.28
CNOT1-215ENST00000569020 OR4E2Q8NGC2 313 aa13.3□□□□□ -0.28
CNOT1-215ENST00000569020 OR13C4Q8NGS5 318 aa13.3□□□□□ -0.28
CNOT1-215ENST00000569020 HM13Q8TCT9 377 aa13.3□□□□□ -0.28
CNOT1-215ENST00000569020 NAT14Q8WUY8 206 aa13.3□□□□□ -0.28
CNOT1-215ENST00000569020 HEXDCQ8WVB3 486 aa13.3□□□□□ -0.28
CNOT1-215ENST00000569020 KRT35Q92764 455 aa13.3□□□□□ -0.28
CNOT1-215ENST00000569020 CLIP3Q96DZ5 547 aa13.3□□□□□ -0.28
CNOT1-215ENST00000569020 RMDN2Q96LZ7 410 aa13.3□□□□□ -0.28
CNOT1-215ENST00000569020 LRFN5Q96NI6 719 aa13.3□□□□□ -0.28
CNOT1-215ENST00000569020 PPP1R2P1Q96PQ5 205 aa13.3□□□□□ -0.28
CNOT1-215ENST00000569020 APOL2Q9BQE5 337 aa13.3□□□□□ -0.28
CNOT1-215ENST00000569020 GORASP1Q9BQQ3 440 aa13.3□□□□□ -0.28
CNOT1-215ENST00000569020 TRIM55Q9BYV6 548 aa13.3□□□□□ -0.28
CNOT1-215ENST00000569020 C1GALT1Q9NS00 363 aa13.3□□□□□ -0.28
CNOT1-215ENST00000569020 EFR3BQ9Y2G0 817 aa13.3□□□□□ -0.28
CNOT1-215ENST00000569020 DOPEY2Q9Y3R5 2298 aa13.3□□□□□ -0.28
CNOT1-215ENST00000569020 PIKFYVEQ9Y2I7 2098 aa13.29□□□□□ -0.28
CNOT1-215ENST00000569020 CLEC18AA5D8T8 446 aa13.29□□□□□ -0.28
CNOT1-215ENST00000569020 ARGFXA6NJG6 315 aa13.29□□□□□ -0.28
CNOT1-215ENST00000569020 KCNN4O15554 427 aa13.29□□□□□ -0.28
CNOT1-215ENST00000569020 MAP3K7O43318 606 aa13.29□□□□□ -0.28
CNOT1-215ENST00000569020 VPS4BO75351 444 aa13.29□□□□□ -0.28
CNOT1-215ENST00000569020 RBP3P10745 1247 aa13.29□□□□□ -0.28
CNOT1-215ENST00000569020 ATP1B2P14415 290 aaPredicted RBP13.29□□□□□ -0.28
CNOT1-215ENST00000569020 CYLC1P35663 651 aaPredicted RBP13.29□□□□□ -0.28
CNOT1-215ENST00000569020 ARCN1P48444 511 aaKnown RBP13.29□□□□□ -0.28
CNOT1-215ENST00000569020 EIF3EP60228 445 aaKnown RBP13.29□□□□□ -0.28
CNOT1-215ENST00000569020 TMPRSS15P98073 1019 aa13.29□□□□□ -0.28
CNOT1-215ENST00000569020 GPS2Q13227 327 aa13.29□□□□□ -0.28
CNOT1-215ENST00000569020 OLIG2Q13516 323 aa13.29□□□□□ -0.28
CNOT1-215ENST00000569020 ZNF449Q6P9G9 518 aa13.29□□□□□ -0.28
CNOT1-215ENST00000569020 DARS2Q6PI48 645 aaKnown RBP13.29□□□□□ -0.28
CNOT1-215ENST00000569020 CLEC18BQ6UXF7 455 aa13.29□□□□□ -0.28
CNOT1-215ENST00000569020 ZNF517Q6ZMY9 492 aaPredicted RBP13.29□□□□□ -0.28
CNOT1-215ENST00000569020 SNX20Q7Z614 316 aa13.29□□□□□ -0.28
CNOT1-215ENST00000569020 CCDC170Q8IYT3 715 aa13.29□□□□□ -0.28
CNOT1-215ENST00000569020 NXPE1Q8N323 547 aa13.29□□□□□ -0.28
CNOT1-215ENST00000569020 TC2NQ8N9U0 490 aa13.29□□□□□ -0.28
CNOT1-215ENST00000569020 CLEC18CQ8NCF0 446 aa13.29□□□□□ -0.28
CNOT1-215ENST00000569020 ACTL9Q8TC94 416 aa13.29□□□□□ -0.28
CNOT1-215ENST00000569020 LCN9Q8WX39 176 aa13.29□□□□□ -0.28
CNOT1-215ENST00000569020 CALR3Q96L12 384 aaKnown RBP13.29□□□□□ -0.28
CNOT1-215ENST00000569020 FERD3LQ96RJ6 166 aa13.29□□□□□ -0.28
CNOT1-215ENST00000569020 COPS8Q99627 209 aa13.29□□□□□ -0.28
CNOT1-215ENST00000569020 C19orf43Q9BQ61 176 aa13.29□□□□□ -0.28
CNOT1-215ENST00000569020 SLC25A23Q9BV35 468 aa13.29□□□□□ -0.28
CNOT1-215ENST00000569020 TLR10Q9BXR5 811 aa13.29□□□□□ -0.28
CNOT1-215ENST00000569020 SLC7A5P2Q9GIP4 190 aa13.29□□□□□ -0.28
CNOT1-215ENST00000569020 SRMSQ9H3Y6 488 aa13.29□□□□□ -0.28
CNOT1-215ENST00000569020 VPS37BQ9H9H4 285 aa13.29□□□□□ -0.28
CNOT1-215ENST00000569020 SYTL2Q9HCH5 934 aa13.29□□□□□ -0.28
CNOT1-215ENST00000569020 POMT2Q9UKY4 750 aa13.29□□□□□ -0.28
CNOT1-215ENST00000569020 VPS4AQ9UN37 437 aa13.29□□□□□ -0.28
CNOT1-215ENST00000569020 SNX7Q9UNH6 387 aa13.29□□□□□ -0.28
CNOT1-215ENST00000569020 TFR2Q9UP52 801 aa13.29□□□□□ -0.28
CNOT1-215ENST00000569020 PCDHGA9Q9Y5G4 932 aaKnown RBP13.29□□□□□ -0.28
CNOT1-215ENST00000569020 CCDC66A2RUB6 948 aa13.28□□□□□ -0.28
CNOT1-215ENST00000569020 GSAPA4D1B5 854 aa13.28□□□□□ -0.28
CNOT1-215ENST00000569020 SLC9B1P1A6NJY1 282 aa13.28□□□□□ -0.28
CNOT1-215ENST00000569020 TTLL8A6PVC2 850 aa13.28□□□□□ -0.28
CNOT1-215ENST00000569020 IFRD1O00458 451 aaPredicted RBP13.28□□□□□ -0.28
CNOT1-215ENST00000569020 SGTAO43765 313 aa13.28□□□□□ -0.28
CNOT1-215ENST00000569020 PDGFAP04085 211 aa13.28□□□□□ -0.28
CNOT1-215ENST00000569020 CTNNA1P35221 906 aaKnown RBP13.28□□□□□ -0.28
CNOT1-215ENST00000569020 CETN2P41208 172 aa13.28□□□□□ -0.28
CNOT1-215ENST00000569020 CCL11P51671 97 aa13.28□□□□□ -0.28
CNOT1-215ENST00000569020 PGDP52209 483 aa13.28□□□□□ -0.28
CNOT1-215ENST00000569020 IL10RAQ13651 578 aa13.28□□□□□ -0.28
CNOT1-215ENST00000569020 LAMB3Q13751 1172 aa13.28□□□□□ -0.28
CNOT1-215ENST00000569020 FBXO38Q6PIJ6 1188 aa13.28□□□□□ -0.28
CNOT1-215ENST00000569020 LILRA3Q8N6C8 439 aaPredicted RBP13.28□□□□□ -0.28
CNOT1-215ENST00000569020 EFCAB3Q8N7B9 438 aa13.28□□□□□ -0.28
CNOT1-215ENST00000569020 PPM1MQ96MI6 270 aa13.28□□□□□ -0.28
CNOT1-215ENST00000569020 TBL1YQ9BQ87 522 aa13.28□□□□□ -0.28
CNOT1-215ENST00000569020 OSBPL8Q9BZF1 889 aa13.28□□□□□ -0.28
CNOT1-215ENST00000569020 TRIM5Q9C035 493 aa13.28□□□□□ -0.28
CNOT1-215ENST00000569020 ING2Q9H160 280 aa13.28□□□□□ -0.28
CNOT1-215ENST00000569020 CHST8Q9H2A9 424 aa13.28□□□□□ -0.28
CNOT1-215ENST00000569020 FAM96AQ9H5X1 160 aa13.28□□□□□ -0.28
CNOT1-215ENST00000569020 FEZ2Q9UHY8 353 aaPredicted RBP13.28□□□□□ -0.28
CNOT1-215ENST00000569020 G3BP2Q9UN86 482 aaKnown RBP13.28□□□□□ -0.28
CNOT1-215ENST00000569020 PCDHA3Q9Y5H8 950 aa13.28□□□□□ -0.28
CNOT1-215ENST00000569020 TMEM150CB9EJG8 249 aa13.27□□□□□ -0.29
CNOT1-215ENST00000569020 MEN1O00255 615 aa13.27□□□□□ -0.29
CNOT1-215ENST00000569020 PJA2O43164 708 aa13.27□□□□□ -0.29
CNOT1-215ENST00000569020 ZNF189O75820 626 aaPredicted RBP13.27□□□□□ -0.29
CNOT1-215ENST00000569020 RAB40ALP0C0E4 278 aa13.27□□□□□ -0.29
CNOT1-215ENST00000569020 GP1BBP13224 206 aa13.27□□□□□ -0.29
CNOT1-215ENST00000569020 CYP2A7P20853 494 aa13.27□□□□□ -0.29
CNOT1-215ENST00000569020 PRDX3P30048 256 aaKnown RBP13.27□□□□□ -0.29
CNOT1-215ENST00000569020 MC4RP32245 332 aa13.27□□□□□ -0.29
CNOT1-215ENST00000569020 PREPP48147 710 aa13.27□□□□□ -0.29
CNOT1-215ENST00000569020 ZNF140P52738 457 aaPredicted RBP13.27□□□□□ -0.29
CNOT1-215ENST00000569020 NAP1L1P55209 391 aaKnown RBP13.27□□□□□ -0.29
CNOT1-215ENST00000569020 RWDD2BP57060 319 aa13.27□□□□□ -0.29
CNOT1-215ENST00000569020 CHAF1BQ13112 559 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms