RNA–Protein interactions for RNA: ENST00000568883.5

PKM-222, Transcript of pyruvate kinase M1/2, human

TSL 5 BASIC

Gene PKM, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-222	ENST00000568883	CNDP2	Q96KP4	475 aa	Known RBP	12.46	□□□□□ -0.42
PKM-222	ENST00000568883	PPM1M	Q96MI6	270 aa		12.46	□□□□□ -0.42
PKM-222	ENST00000568883	TUBA1C	Q9BQE3	449 aa		12.46	□□□□□ -0.42
PKM-222	ENST00000568883	CD244	Q9BZW8	370 aa		12.46	□□□□□ -0.42
PKM-222	ENST00000568883	DPY30	Q9C005	99 aa		12.46	□□□□□ -0.42
PKM-222	ENST00000568883	LSM7	Q9UK45	103 aa	Known RBP	12.46	□□□□□ -0.42
PKM-222	ENST00000568883	FCF1	Q9Y324	198 aa	Known RBP	12.46	□□□□□ -0.42
PKM-222	ENST00000568883	CHD5	Q8TDI0	1954 aa		12.45	□□□□□ -0.42
PKM-222	ENST00000568883	TRBV5-4	A0A0C4DH59	114 aa		12.45	□□□□□ -0.42
PKM-222	ENST00000568883	GLYATL1P3	A0A0U1RQE8	302 aa		12.45	□□□□□ -0.42
PKM-222	ENST00000568883	C1orf232	A0A0U1RR37	186 aa		12.45	□□□□□ -0.42
PKM-222	ENST00000568883		K7EPI3	171 aa		12.45	□□□□□ -0.42
PKM-222	ENST00000568883	ANKRD28	O15084	1053 aa		12.45	□□□□□ -0.42
PKM-222	ENST00000568883	SEC24D	O94855	1032 aa	Predicted RBP	12.45	□□□□□ -0.42
PKM-222	ENST00000568883	PRSS23	O95084	383 aa		12.45	□□□□□ -0.42
PKM-222	ENST00000568883	SLC25A14	O95258	325 aa	Predicted RBP	12.45	□□□□□ -0.42
PKM-222	ENST00000568883	TRBC1	P01850	177 aa		12.45	□□□□□ -0.42
PKM-222	ENST00000568883	EPB42	P16452	691 aa		12.45	□□□□□ -0.42
PKM-222	ENST00000568883	CTPS1	P17812	591 aa		12.45	□□□□□ -0.42
PKM-222	ENST00000568883	RPL17	P18621	184 aa	Known RBP	12.45	□□□□□ -0.42
PKM-222	ENST00000568883	MZF1	P28698	734 aa	Predicted RBP	12.45	□□□□□ -0.42
PKM-222	ENST00000568883	SPAM1	P38567	509 aa		12.45	□□□□□ -0.42
PKM-222	ENST00000568883	CSK	P41240	450 aa		12.45	□□□□□ -0.42
PKM-222	ENST00000568883	HSPA7	P48741	367 aa		12.45	□□□□□ -0.42
PKM-222	ENST00000568883	CDH15	P55291	814 aa		12.45	□□□□□ -0.42
PKM-222	ENST00000568883	RPL38	P63173	70 aa	Known RBP	12.45	□□□□□ -0.42
PKM-222	ENST00000568883	DAG1	Q14118	895 aa		12.45	□□□□□ -0.42
PKM-222	ENST00000568883	ABRAXAS2	Q15018	415 aa		12.45	□□□□□ -0.42
PKM-222	ENST00000568883	MAPKAPK3	Q16644	382 aa		12.45	□□□□□ -0.42
PKM-222	ENST00000568883	USP51	Q70EK9	711 aa		12.45	□□□□□ -0.42
PKM-222	ENST00000568883	DCBLD1	Q8N8Z6	715 aa		12.45	□□□□□ -0.42
PKM-222	ENST00000568883	TMIGD2	Q96BF3	282 aa		12.45	□□□□□ -0.42
PKM-222	ENST00000568883	NTMT1	Q9BV86	223 aa		12.45	□□□□□ -0.42
PKM-222	ENST00000568883	TRIM8	Q9BZR9	551 aa		12.45	□□□□□ -0.42
PKM-222	ENST00000568883	RNF38	Q9H0F5	515 aa		12.45	□□□□□ -0.42
PKM-222	ENST00000568883	NSUN3	Q9H649	340 aa	Known RBP	12.45	□□□□□ -0.42
PKM-222	ENST00000568883	ATP13A3	Q9H7F0	1226 aa		12.45	□□□□□ -0.42
PKM-222	ENST00000568883	HMX1	Q9NP08	348 aa	Predicted RBP	12.45	□□□□□ -0.42
PKM-222	ENST00000568883	SLAMF8	Q9P0V8	285 aa		12.45	□□□□□ -0.42
PKM-222	ENST00000568883	DNMT3B	Q9UBC3	853 aa	Known RBP	12.45	□□□□□ -0.42
PKM-222	ENST00000568883	HCST	Q9UBK5	93 aa		12.45	□□□□□ -0.42
PKM-222	ENST00000568883	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	12.45	□□□□□ -0.42
PKM-222	ENST00000568883	OR51B4	Q9Y5P0	310 aa		12.45	□□□□□ -0.42
PKM-222	ENST00000568883	BPTF	Q12830	3046 aa		12.45	□□□□□ -0.42
PKM-222	ENST00000568883	C2orf78	A6NCI8	922 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	PABPN1L	A6NDY0	278 aa	Known RBP	12.44	□□□□□ -0.42
PKM-222	ENST00000568883	EIF3F	O00303	357 aa	Predicted RBP	12.44	□□□□□ -0.42
PKM-222	ENST00000568883	SCEL	O95171	688 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	TRIM16	O95361	564 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	PARN	O95453	639 aa	Known RBP	12.44	□□□□□ -0.42
PKM-222	ENST00000568883	SEC24A	O95486	1093 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	EFEMP2	O95967	443 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	IGSF6	O95976	241 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	KRT6A	P02538	564 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	KRT6B	P04259	564 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	NFKBIA	P25963	317 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	PCSK6	P29122	969 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	KRT6C	P48668	564 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	HLCS	P50747	726 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	EPHB3	P54753	998 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	ARSF	P54793	590 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	ADARB1	P78563	741 aa	Known RBP	12.44	□□□□□ -0.42
PKM-222	ENST00000568883	BIRC2	Q13490	618 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	12.44	□□□□□ -0.42
PKM-222	ENST00000568883	TTC23	Q5W5X9	447 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	DHRS4L2	Q6PKH6	230 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	TRIM46	Q7Z4K8	759 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	ZDHHC13	Q8IUH4	622 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	REM2	Q8IYK8	340 aa	Predicted RBP	12.44	□□□□□ -0.42
PKM-222	ENST00000568883	CLEC4F	Q8N1N0	589 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	CRIPAK	Q8N1N5	446 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	TCAIM	Q8N3R3	496 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	SVOPL	Q8N434	492 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	DTWD1	Q8N5C7	304 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	B4GALNT2	Q8NHY0	566 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	FAM81A	Q8TBF8	368 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	ISOC1	Q96CN7	298 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	NRBF2	Q96F24	287 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	IGSF21	Q96ID5	467 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	FBXL20	Q96IG2	436 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	APOL5	Q9BWW9	433 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	HIPK3	Q9H422	1215 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	ACTL8	Q9H568	366 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	KCTD5	Q9NXV2	234 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	TMEM9	Q9P0T7	183 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	ZMYM5	Q9UJ78	669 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	ZNF510	Q9Y2H8	683 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	GREB1	Q4ZG55	1949 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	CXorf51A	A0A1B0GTR3	108 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883		A0A1B0GVG6	124 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	PRRG1	O14668	218 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	GUCA1C	O95843	209 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	GNRH1	P01148	92 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	ANXA5	P08758	320 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	ALPI	P09923	528 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	THRB	P10828	461 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	CDK4	P11802	303 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	SERPINA4	P29622	427 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	MTPN	P58546	118 aa		12.44	□□□□□ -0.42
PKM-222	ENST00000568883	YBX1	P67809	324 aa	Known RBP	12.44	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms