RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 DEFB124Q8NES8 71 aa16.38■□□□□ 0.21
COMMD4-224ENST00000568877 SPDYE1Q8NFV5 336 aaPredicted RBP16.38■□□□□ 0.21
COMMD4-224ENST00000568877 GIMAP7Q8NHV1 300 aa16.38■□□□□ 0.21
COMMD4-224ENST00000568877 CD200R1Q8TD46 325 aa16.38■□□□□ 0.21
COMMD4-224ENST00000568877 SLC37A2Q8TED4 501 aa16.38■□□□□ 0.21
COMMD4-224ENST00000568877 SLC44A1Q8WWI5 657 aa16.38■□□□□ 0.21
COMMD4-224ENST00000568877 INPP5DQ92835 1189 aa16.38■□□□□ 0.21
COMMD4-224ENST00000568877 RMDN2Q96LZ7 410 aa16.38■□□□□ 0.21
COMMD4-224ENST00000568877 INSM2Q96T92 566 aaPredicted RBP16.38■□□□□ 0.21
COMMD4-224ENST00000568877 SLC30A3Q99726 388 aa16.38■□□□□ 0.21
COMMD4-224ENST00000568877 EVA1BQ9NVM1 165 aa16.38■□□□□ 0.21
COMMD4-224ENST00000568877 ZNF624Q9P2J8 865 aaPredicted RBP16.38■□□□□ 0.21
COMMD4-224ENST00000568877 TRMT6Q9UJA5 497 aaKnown RBP16.38■□□□□ 0.21
COMMD4-224ENST00000568877 MTO1Q9Y2Z2 717 aaKnown RBP16.38■□□□□ 0.21
COMMD4-224ENST00000568877 FAM186AA6NE01 2351 aa16.37■□□□□ 0.21
COMMD4-224ENST00000568877 EXOC1LA0A1B0GW35 172 aa16.37■□□□□ 0.21
COMMD4-224ENST00000568877 POC1B-GALNT4F8VUJ3 575 aa16.37■□□□□ 0.21
COMMD4-224ENST00000568877 IFRD1O00458 451 aaPredicted RBP16.37■□□□□ 0.21
COMMD4-224ENST00000568877 TNFSF14O43557 240 aa16.37■□□□□ 0.21
COMMD4-224ENST00000568877 XRCC1P18887 633 aaPredicted RBP16.37■□□□□ 0.21
COMMD4-224ENST00000568877 SAT1P21673 171 aa16.37■□□□□ 0.21
COMMD4-224ENST00000568877 FDXRP22570 491 aa16.37■□□□□ 0.21
COMMD4-224ENST00000568877 HSD17B3P37058 310 aa16.37■□□□□ 0.21
COMMD4-224ENST00000568877 SLC19A1P41440 591 aa16.37■□□□□ 0.21
COMMD4-224ENST00000568877 MSH2P43246 934 aa16.37■□□□□ 0.21
COMMD4-224ENST00000568877 GBX1Q14549 363 aa16.37■□□□□ 0.21
COMMD4-224ENST00000568877 RPE65Q16518 533 aa16.37■□□□□ 0.21
COMMD4-224ENST00000568877 MAP9Q49MG5 647 aa16.37■□□□□ 0.21
COMMD4-224ENST00000568877 ACSBG2Q5FVE4 666 aa16.37■□□□□ 0.21
COMMD4-224ENST00000568877 PDZD3Q86UT5 571 aa16.37■□□□□ 0.21
COMMD4-224ENST00000568877 PIM3Q86V86 326 aa16.37■□□□□ 0.21
COMMD4-224ENST00000568877 OR6C4Q8NGE1 309 aa16.37■□□□□ 0.21
COMMD4-224ENST00000568877 CXorf40BQ96DE9 158 aa16.37■□□□□ 0.21
COMMD4-224ENST00000568877 C12orf66Q96MD2 445 aa16.37■□□□□ 0.21
COMMD4-224ENST00000568877 PAFAH2Q99487 392 aa16.37■□□□□ 0.21
COMMD4-224ENST00000568877 GPR22Q99680 433 aa16.37■□□□□ 0.21
COMMD4-224ENST00000568877 OLFM1Q99784 485 aa16.37■□□□□ 0.21
COMMD4-224ENST00000568877 CCDC77Q9BR77 488 aa16.37■□□□□ 0.21
COMMD4-224ENST00000568877 RTKNQ9BST9 563 aa16.37■□□□□ 0.21
COMMD4-224ENST00000568877 CPNE7Q9UBL6 633 aa16.37■□□□□ 0.21
COMMD4-224ENST00000568877 IKBKGQ9Y6K9 419 aa16.37■□□□□ 0.21
COMMD4-224ENST00000568877 GVINP1Q7Z2Y8 2422 aa16.37■□□□□ 0.21
COMMD4-224ENST00000568877 CABIN1Q9Y6J0 2220 aa16.37■□□□□ 0.21
COMMD4-224ENST00000568877 COL5A1P20908 1838 aaPredicted RBP16.36■□□□□ 0.21
COMMD4-224ENST00000568877 EME2A4GXA9 379 aaPredicted RBP16.36■□□□□ 0.21
COMMD4-224ENST00000568877 CTIFO43310 598 aaKnown RBP16.36■□□□□ 0.21
COMMD4-224ENST00000568877 NUDT21O43809 227 aaKnown RBP16.36■□□□□ 0.21
COMMD4-224ENST00000568877 VIPP01282 170 aa16.36■□□□□ 0.21
COMMD4-224ENST00000568877 INHBAP08476 426 aa16.36■□□□□ 0.21
COMMD4-224ENST00000568877 ITGA2BP08514 1039 aa16.36■□□□□ 0.21
COMMD4-224ENST00000568877 MTHFD1P11586 935 aaKnown RBP16.36■□□□□ 0.21
COMMD4-224ENST00000568877 GLB1P16278 677 aa16.36■□□□□ 0.21
COMMD4-224ENST00000568877 ACADLP28330 430 aa16.36■□□□□ 0.21
COMMD4-224ENST00000568877 ATP5DP30049 168 aa16.36■□□□□ 0.21
COMMD4-224ENST00000568877 FASLGP48023 281 aa16.36■□□□□ 0.21
COMMD4-224ENST00000568877 TAS2R39P59534 338 aa16.36■□□□□ 0.21
COMMD4-224ENST00000568877 UBE2IP63279 158 aaKnown RBP16.36■□□□□ 0.21
COMMD4-224ENST00000568877 POU4F1Q01851 419 aa16.36■□□□□ 0.21
COMMD4-224ENST00000568877 DNAJC3Q13217 504 aa16.36■□□□□ 0.21
COMMD4-224ENST00000568877 PDAP1Q13442 181 aaKnown RBP16.36■□□□□ 0.21
COMMD4-224ENST00000568877 BIRC2Q13490 618 aa16.36■□□□□ 0.21
COMMD4-224ENST00000568877 TRIP6Q15654 476 aaKnown RBP16.36■□□□□ 0.21
COMMD4-224ENST00000568877 GUSBP11Q6P575 273 aa16.36■□□□□ 0.21
COMMD4-224ENST00000568877 TRIM48Q8IWZ4 208 aa16.36■□□□□ 0.21
COMMD4-224ENST00000568877 AVL9Q8NBF6 648 aa16.36■□□□□ 0.21
COMMD4-224ENST00000568877 STN1Q9H668 368 aaKnown RBP16.36■□□□□ 0.21
COMMD4-224ENST00000568877 POT1Q9NUX5 634 aa16.36■□□□□ 0.21
COMMD4-224ENST00000568877 IMP3Q9NV31 184 aaKnown RBP16.36■□□□□ 0.21
COMMD4-224ENST00000568877 LRIT1Q9P2V4 623 aa16.36■□□□□ 0.21
COMMD4-224ENST00000568877 SLC39A10Q9ULF5 831 aa16.36■□□□□ 0.21
COMMD4-224ENST00000568877 CFAP20Q9Y6A4 193 aaKnown RBP16.36■□□□□ 0.21
COMMD4-224ENST00000568877 RNF215Q9Y6U7 377 aa16.36■□□□□ 0.21
COMMD4-224ENST00000568877 CPED1A4D0V7 1026 aa16.35■□□□□ 0.21
COMMD4-224ENST00000568877 RHPN2P1A8MT19 583 aa16.35■□□□□ 0.21
COMMD4-224ENST00000568877 PPM1DO15297 605 aa16.35■□□□□ 0.21
COMMD4-224ENST00000568877 CBSLP0DN79 551 aa16.35■□□□□ 0.21
COMMD4-224ENST00000568877 CEACAM1P13688 526 aa16.35■□□□□ 0.21
COMMD4-224ENST00000568877 ACP1P24666 158 aa16.35■□□□□ 0.21
COMMD4-224ENST00000568877 CBSP35520 551 aa16.35■□□□□ 0.21
COMMD4-224ENST00000568877 PGGT1BP53609 377 aa16.35■□□□□ 0.21
COMMD4-224ENST00000568877 SLC12A2P55011 1212 aa16.35■□□□□ 0.21
COMMD4-224ENST00000568877 HHEXQ03014 270 aa16.35■□□□□ 0.21
COMMD4-224ENST00000568877 ABRQ12979 859 aa16.35■□□□□ 0.21
COMMD4-224ENST00000568877 USP10Q14694 798 aaKnown RBP16.35■□□□□ 0.21
COMMD4-224ENST00000568877 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.35■□□□□ 0.21
COMMD4-224ENST00000568877 PAQR3Q6TCH7 311 aa16.35■□□□□ 0.21
COMMD4-224ENST00000568877 EFL1Q7Z2Z2 1120 aaKnown RBP16.35■□□□□ 0.21
COMMD4-224ENST00000568877 GLRX5Q86SX6 157 aa16.35■□□□□ 0.21
COMMD4-224ENST00000568877 SPNS2Q8IVW8 549 aa16.35■□□□□ 0.21
COMMD4-224ENST00000568877 CPNE9Q8IYJ1 553 aa16.35■□□□□ 0.21
COMMD4-224ENST00000568877 MREGQ8N565 214 aa16.35■□□□□ 0.21
COMMD4-224ENST00000568877 MYRIPQ8NFW9 859 aa16.35■□□□□ 0.21
COMMD4-224ENST00000568877 DCAKDQ8WVC6 231 aa16.35■□□□□ 0.21
COMMD4-224ENST00000568877 TFGQ92734 400 aaPredicted RBP16.35■□□□□ 0.21
COMMD4-224ENST00000568877 NAT6Q93015 286 aa16.35■□□□□ 0.21
COMMD4-224ENST00000568877 TSPAN17Q96FV3 270 aa16.35■□□□□ 0.21
COMMD4-224ENST00000568877 DHRS4Q9BTZ2 278 aa16.35■□□□□ 0.21
COMMD4-224ENST00000568877 CAB39LQ9H9S4 337 aa16.35■□□□□ 0.21
COMMD4-224ENST00000568877 FETUBQ9UGM5 382 aa16.35■□□□□ 0.21
COMMD4-224ENST00000568877 ZNF180Q9UJW8 692 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms