RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 SPDYE1Q8NFV5 336 aaPredicted RBP11.46□□□□□ -0.57
GTF3C1-209ENST00000568569 OR4E2Q8NGC2 313 aa11.46□□□□□ -0.57
GTF3C1-209ENST00000568569 SPATA22Q8NHS9 363 aa11.46□□□□□ -0.57
GTF3C1-209ENST00000568569 UNKQ9C0B0 810 aaKnown RBP11.46□□□□□ -0.57
GTF3C1-209ENST00000568569 RUBCNLQ9H714 662 aa11.46□□□□□ -0.57
GTF3C1-209ENST00000568569 SMOXQ9NWM0 555 aa11.46□□□□□ -0.57
GTF3C1-209ENST00000568569 HEY1Q9Y5J3 304 aa11.46□□□□□ -0.57
GTF3C1-209ENST00000568569 SPTBP11277 2137 aa11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 GLYATL1P3A0A0U1RQE8 302 aa11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 HEATR9A2RTY3 570 aa11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 GSAPA4D1B5 854 aa11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 PPP1R12AO14974 1030 aaPredicted RBP11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 ZNF749O43361 778 aa11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 UGT1A9O60656 530 aa11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 PMPCBO75439 489 aa11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 KRT38O76015 456 aa11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 MT-CYBP00156 380 aaPredicted RBP11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 UGT1A6P19224 532 aa11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 UGT1A1P22309 533 aa11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 UGT1A4P22310 534 aa11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 GRNP28799 593 aaKnown RBP11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 AKT1P31749 480 aa11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 FOLR3P41439 243 aa11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 LMAN1P49257 510 aa11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 SOX8P57073 446 aa11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 TAS2R40P59535 323 aa11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 GSE1Q14687 1217 aa11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 FILIP1LQ4L180 1135 aa11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 FNBP1LQ5T0N5 605 aa11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 FAM182AQ5T1J6 154 aa11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 ZFYVE27Q5T4F4 411 aa11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 B4GALNT4Q76KP1 1039 aa11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 MCEMP1Q8IX19 187 aa11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 GPR135Q8IZ08 494 aa11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 PLD5Q8N7P1 536 aa11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 OR2L2Q8NH16 312 aa11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 RNF157Q96PX1 679 aa11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 WDR77Q9BQA1 342 aaPredicted RBP11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 PITPNM3Q9BZ71 974 aa11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 SRMSQ9H3Y6 488 aa11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 UGT1A7Q9HAW7 530 aa11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 UGT1A10Q9HAW8 530 aa11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 UGT1A8Q9HAW9 530 aa11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 P4HTMQ9NXG6 502 aa11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 CHMP5Q9NZZ3 219 aa11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 OSGIN2Q9Y236 505 aa11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 PTRH2Q9Y3E5 179 aaKnown RBP11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 HEBP2Q9Y5Z4 205 aa11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 BZW2Q9Y6E2 419 aaKnown RBP11.45□□□□□ -0.58
GTF3C1-209ENST00000568569 A0A0A6YYK5 440 aaPredicted RBP11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 PRSS44E7EML9 344 aa11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 E2F3O00716 465 aa11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 ZG16O60844 167 aa11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 PROSCO94903 275 aa11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 CD63P08962 238 aa11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 PYGMP11217 842 aa11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 ST6GAL1P15907 406 aa11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 MSH3P20585 1137 aa11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 PRDX3P30048 256 aaKnown RBP11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 TNNT3P45378 269 aaPredicted RBP11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 PDK1Q15118 436 aa11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 NOMO1Q15155 1222 aa11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 CYP2A13Q16696 494 aa11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 MLIPQ5VWP3 458 aa11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 SP5Q6BEB4 398 aaPredicted RBP11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 DET1Q7L5Y6 550 aa11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 KCNMB4Q86W47 210 aa11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 CPNE8Q86YQ8 564 aa11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 ACVR1CQ8NER5 493 aa11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 OR2Y1Q8NGV0 311 aa11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 PROKR1Q8TCW9 393 aa11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 PPP4R1Q8TF05 950 aa11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 COG1Q8WTW3 980 aa11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 LCN9Q8WX39 176 aa11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 RAPGEF5Q92565 580 aa11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 N4BP2L2Q92802 583 aaPredicted RBP11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 RMDN2Q96LZ7 410 aa11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 OLFM3Q96PB7 478 aa11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 GLOD4Q9HC38 313 aa11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 ZBTB20Q9HC78 741 aaPredicted RBP11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 HACD3Q9P035 362 aa11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 IL17CQ9P0M4 197 aa11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 FAM8A1Q9UBU6 413 aa11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 NDOR1Q9UHB4 597 aa11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 GPN3Q9UHW5 284 aaPredicted RBP11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 NOVA2Q9UNW9 492 aaKnown RBP11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 PKP3Q9Y446 797 aa11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 AP1M2Q9Y6Q5 423 aa11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 PCSK5Q92824 1860 aa11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 PIKFYVEQ9Y2I7 2098 aa11.44□□□□□ -0.58
GTF3C1-209ENST00000568569 LOC285095A0A1B0GVY8 99 aa11.43□□□□□ -0.58
GTF3C1-209ENST00000568569 ZNF487B1APH4 448 aa11.43□□□□□ -0.58
GTF3C1-209ENST00000568569 EPOP01588 193 aa11.43□□□□□ -0.58
GTF3C1-209ENST00000568569 EDN3P14138 238 aa11.43□□□□□ -0.58
GTF3C1-209ENST00000568569 KDELR1P24390 212 aa11.43□□□□□ -0.58
GTF3C1-209ENST00000568569 ITGA3P26006 1051 aa11.43□□□□□ -0.58
GTF3C1-209ENST00000568569 AIMP2Q13155 320 aaKnown RBP11.43□□□□□ -0.58
GTF3C1-209ENST00000568569 ANO6Q4KMQ2 910 aa11.43□□□□□ -0.58
GTF3C1-209ENST00000568569 BCL7AQ4VC05 210 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms