RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 EFCAB3Q8N7B9 438 aa18.33■□□□□ 0.52
GTF3C1-207ENST00000567806 NAT14Q8WUY8 206 aa18.33■□□□□ 0.52
GTF3C1-207ENST00000567806 ULK4Q96C45 1275 aa18.33■□□□□ 0.52
GTF3C1-207ENST00000567806 ZNF501Q96CX3 271 aaPredicted RBP18.33■□□□□ 0.52
GTF3C1-207ENST00000567806 LINC00615Q96LM1 132 aaPredicted RBP18.33■□□□□ 0.52
GTF3C1-207ENST00000567806 SLC25A23Q9BV35 468 aa18.33■□□□□ 0.52
GTF3C1-207ENST00000567806 TRIM55Q9BYV6 548 aa18.33■□□□□ 0.52
GTF3C1-207ENST00000567806 FKBPLQ9UIM3 349 aa18.33■□□□□ 0.52
GTF3C1-207ENST00000567806 VPS4BO75351 444 aa18.32■□□□□ 0.52
GTF3C1-207ENST00000567806 STK10O94804 968 aaKnown RBP18.32■□□□□ 0.52
GTF3C1-207ENST00000567806 CDH3P22223 829 aa18.32■□□□□ 0.52
GTF3C1-207ENST00000567806 MARCKSL1P49006 195 aa18.32■□□□□ 0.52
GTF3C1-207ENST00000567806 PGDP52209 483 aa18.32■□□□□ 0.52
GTF3C1-207ENST00000567806 CAPRIN2Q6IMN6 1127 aaKnown RBP18.32■□□□□ 0.52
GTF3C1-207ENST00000567806 FBXO38Q6PIJ6 1188 aa18.32■□□□□ 0.52
GTF3C1-207ENST00000567806 DAAM2Q86T65 1068 aa18.32■□□□□ 0.52
GTF3C1-207ENST00000567806 HEXDCQ8WVB3 486 aa18.32■□□□□ 0.52
GTF3C1-207ENST00000567806 CPT1BQ92523 772 aa18.32■□□□□ 0.52
GTF3C1-207ENST00000567806 PDLIM2Q96JY6 352 aa18.32■□□□□ 0.52
GTF3C1-207ENST00000567806 CALR3Q96L12 384 aaKnown RBP18.32■□□□□ 0.52
GTF3C1-207ENST00000567806 FERD3LQ96RJ6 166 aa18.32■□□□□ 0.52
GTF3C1-207ENST00000567806 APOL2Q9BQE5 337 aa18.32■□□□□ 0.52
GTF3C1-207ENST00000567806 ING2Q9H160 280 aa18.32■□□□□ 0.52
GTF3C1-207ENST00000567806 SRMSQ9H3Y6 488 aa18.32■□□□□ 0.52
GTF3C1-207ENST00000567806 LATS2Q9NRM7 1088 aa18.32■□□□□ 0.52
GTF3C1-207ENST00000567806 C1GALT1Q9NS00 363 aa18.32■□□□□ 0.52
GTF3C1-207ENST00000567806 VPS4AQ9UN37 437 aa18.32■□□□□ 0.52
GTF3C1-207ENST00000567806 BTRCQ9Y297 605 aa18.32■□□□□ 0.52
GTF3C1-207ENST00000567806 ARGFXA6NJG6 315 aa18.31■□□□□ 0.52
GTF3C1-207ENST00000567806 SLC9B1P1A6NJY1 282 aa18.31■□□□□ 0.52
GTF3C1-207ENST00000567806 CFAP99D6REC4 459 aa18.31■□□□□ 0.52
GTF3C1-207ENST00000567806 MEN1O00255 615 aa18.31■□□□□ 0.52
GTF3C1-207ENST00000567806 MATN2O00339 956 aa18.31■□□□□ 0.52
GTF3C1-207ENST00000567806 PDGFAP04085 211 aa18.31■□□□□ 0.52
GTF3C1-207ENST00000567806 CTNNA2P26232 953 aa18.31■□□□□ 0.52
GTF3C1-207ENST00000567806 ADRA1AP35348 466 aa18.31■□□□□ 0.52
GTF3C1-207ENST00000567806 COPS2P61201 443 aa18.31■□□□□ 0.52
GTF3C1-207ENST00000567806 TMPRSS15P98073 1019 aa18.31■□□□□ 0.52
GTF3C1-207ENST00000567806 GPS2Q13227 327 aa18.31■□□□□ 0.52
GTF3C1-207ENST00000567806 ANKRD20A2Q5SQ80 823 aa18.31■□□□□ 0.52
GTF3C1-207ENST00000567806 ANKRD20A1Q5TYW2 823 aa18.31■□□□□ 0.52
GTF3C1-207ENST00000567806 ANKRD20A3Q5VUR7 823 aa18.31■□□□□ 0.52
GTF3C1-207ENST00000567806 IZUMO3Q5VZ72 239 aa18.31■□□□□ 0.52
GTF3C1-207ENST00000567806 ZNF449Q6P9G9 518 aa18.31■□□□□ 0.52
GTF3C1-207ENST00000567806 ACVR1CQ8NER5 493 aa18.31■□□□□ 0.52
GTF3C1-207ENST00000567806 HM13Q8TCT9 377 aa18.31■□□□□ 0.52
GTF3C1-207ENST00000567806 LCN9Q8WX39 176 aa18.31■□□□□ 0.52
GTF3C1-207ENST00000567806 KRT35Q92764 455 aa18.31■□□□□ 0.52
GTF3C1-207ENST00000567806 LRRC45Q96CN5 670 aa18.31■□□□□ 0.52
GTF3C1-207ENST00000567806 CLIP3Q96DZ5 547 aa18.31■□□□□ 0.52
GTF3C1-207ENST00000567806 RMDN2Q96LZ7 410 aa18.31■□□□□ 0.52
GTF3C1-207ENST00000567806 PPM1MQ96MI6 270 aa18.31■□□□□ 0.52
GTF3C1-207ENST00000567806 LRFN5Q96NI6 719 aa18.31■□□□□ 0.52
GTF3C1-207ENST00000567806 COPS8Q99627 209 aa18.31■□□□□ 0.52
GTF3C1-207ENST00000567806 CHST8Q9H2A9 424 aa18.31■□□□□ 0.52
GTF3C1-207ENST00000567806 SYTL2Q9HCH5 934 aa18.31■□□□□ 0.52
GTF3C1-207ENST00000567806 PCDHA13Q9Y5I0 950 aa18.31■□□□□ 0.52
GTF3C1-207ENST00000567806 LRRK2Q5S007 2527 aa18.3■□□□□ 0.52
GTF3C1-207ENST00000567806 C17orf113A0A1B0GUU1 675 aa18.3■□□□□ 0.52
GTF3C1-207ENST00000567806 MACROD2A1Z1Q3 448 aa18.3■□□□□ 0.52
GTF3C1-207ENST00000567806 CCDC66A2RUB6 948 aa18.3■□□□□ 0.52
GTF3C1-207ENST00000567806 GSAPA4D1B5 854 aa18.3■□□□□ 0.52
GTF3C1-207ENST00000567806 RAB40ALP0C0E4 278 aa18.3■□□□□ 0.52
GTF3C1-207ENST00000567806 ATP1B2P14415 290 aaPredicted RBP18.3■□□□□ 0.52
GTF3C1-207ENST00000567806 ITGALP20701 1170 aa18.3■□□□□ 0.52
GTF3C1-207ENST00000567806 HADHAP40939 763 aa18.3■□□□□ 0.52
GTF3C1-207ENST00000567806 XIAPP98170 497 aa18.3■□□□□ 0.52
GTF3C1-207ENST00000567806 CHAF1BQ13112 559 aa18.3■□□□□ 0.52
GTF3C1-207ENST00000567806 IL10RAQ13651 578 aa18.3■□□□□ 0.52
GTF3C1-207ENST00000567806 PLEKHS1Q5SXH7 462 aa18.3■□□□□ 0.52
GTF3C1-207ENST00000567806 CPZQ66K79 652 aa18.3■□□□□ 0.52
GTF3C1-207ENST00000567806 C11orf63Q6NUN7 778 aa18.3■□□□□ 0.52
GTF3C1-207ENST00000567806 DARS2Q6PI48 645 aaKnown RBP18.3■□□□□ 0.52
GTF3C1-207ENST00000567806 CDKL3Q8IVW4 592 aaPredicted RBP18.3■□□□□ 0.52
GTF3C1-207ENST00000567806 LILRA3Q8N6C8 439 aaPredicted RBP18.3■□□□□ 0.52
GTF3C1-207ENST00000567806 SLC38A9Q8NBW4 561 aa18.3■□□□□ 0.52
GTF3C1-207ENST00000567806 OR13C4Q8NGS5 318 aa18.3■□□□□ 0.52
GTF3C1-207ENST00000567806 ACTL9Q8TC94 416 aa18.3■□□□□ 0.52
GTF3C1-207ENST00000567806 PPP1R2P1Q96PQ5 205 aa18.3■□□□□ 0.52
GTF3C1-207ENST00000567806 TLR10Q9BXR5 811 aa18.3■□□□□ 0.52
GTF3C1-207ENST00000567806 SLC7A5P2Q9GIP4 190 aa18.3■□□□□ 0.52
GTF3C1-207ENST00000567806 FAM96AQ9H5X1 160 aa18.3■□□□□ 0.52
GTF3C1-207ENST00000567806 LRRC4CQ9HCJ2 640 aa18.3■□□□□ 0.52
GTF3C1-207ENST00000567806 SERTAD3Q9UJW9 196 aa18.3■□□□□ 0.52
GTF3C1-207ENST00000567806 POMT2Q9UKY4 750 aa18.3■□□□□ 0.52
GTF3C1-207ENST00000567806 SNX7Q9UNH6 387 aa18.3■□□□□ 0.52
GTF3C1-207ENST00000567806 PCDHGA9Q9Y5G4 932 aaKnown RBP18.3■□□□□ 0.52
GTF3C1-207ENST00000567806 AGAP14A8MT82 685 aa18.29■□□□□ 0.52
GTF3C1-207ENST00000567806 IFRD1O00458 451 aaPredicted RBP18.29■□□□□ 0.52
GTF3C1-207ENST00000567806 DDX3YO15523 660 aaKnown RBP18.29■□□□□ 0.52
GTF3C1-207ENST00000567806 KCNN4O15554 427 aa18.29■□□□□ 0.52
GTF3C1-207ENST00000567806 SGTAO43765 313 aa18.29■□□□□ 0.52
GTF3C1-207ENST00000567806 PSMB4P28070 264 aa18.29■□□□□ 0.52
GTF3C1-207ENST00000567806 PREPP48147 710 aa18.29■□□□□ 0.52
GTF3C1-207ENST00000567806 PRLHRP49683 370 aa18.29■□□□□ 0.52
GTF3C1-207ENST00000567806 EIF3EP60228 445 aaKnown RBP18.29■□□□□ 0.52
GTF3C1-207ENST00000567806 OTUD4Q01804 1114 aaKnown RBP18.29■□□□□ 0.52
GTF3C1-207ENST00000567806 OLIG2Q13516 323 aa18.29■□□□□ 0.52
GTF3C1-207ENST00000567806 PRAMEF17Q5VTA0 474 aa18.29■□□□□ 0.52
GTF3C1-207ENST00000567806 ZNF517Q6ZMY9 492 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms