RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 ITGB6P18564 788 aa25.54■■□□□ 1.68
NME3-209ENST00000566600 CCR7P32248 378 aa25.54■■□□□ 1.68
NME3-209ENST00000566600 PREPP48147 710 aa25.54■■□□□ 1.68
NME3-209ENST00000566600 LEPRP48357 1165 aaKnown RBP25.54■■□□□ 1.68
NME3-209ENST00000566600 SQSTM1Q13501 440 aa25.54■■□□□ 1.68
NME3-209ENST00000566600 AMZ1Q400G9 498 aa25.54■■□□□ 1.68
NME3-209ENST00000566600 CTSL3PQ5NE16 218 aa25.54■■□□□ 1.68
NME3-209ENST00000566600 PDZD3Q86UT5 571 aa25.54■■□□□ 1.68
NME3-209ENST00000566600 CCDC25Q86WR0 208 aa25.54■■□□□ 1.68
NME3-209ENST00000566600 KRT222Q8N1A0 295 aa25.54■■□□□ 1.68
NME3-209ENST00000566600 SPDYE1Q8NFV5 336 aaPredicted RBP25.54■■□□□ 1.68
NME3-209ENST00000566600 TSPYL1Q9H0U9 437 aa25.54■■□□□ 1.68
NME3-209ENST00000566600 ZDHHC18Q9NUE0 388 aa25.54■■□□□ 1.68
NME3-209ENST00000566600 IQCF5A8MTL0 148 aa25.53■■□□□ 1.68
NME3-209ENST00000566600 TMX2-CTNND1H3BSU7 103 aa25.53■■□□□ 1.68
NME3-209ENST00000566600 DUX1O43812 170 aa25.53■■□□□ 1.68
NME3-209ENST00000566600 AOAHP28039 575 aa25.53■■□□□ 1.68
NME3-209ENST00000566600 CD1CP29017 333 aa25.53■■□□□ 1.68
NME3-209ENST00000566600 PDHA2P29803 388 aa25.53■■□□□ 1.68
NME3-209ENST00000566600 CARSP49589 748 aaKnown RBP25.53■■□□□ 1.68
NME3-209ENST00000566600 PPM1FP49593 454 aaPredicted RBP25.53■■□□□ 1.68
NME3-209ENST00000566600 KRT33BQ14525 404 aa25.53■■□□□ 1.68
NME3-209ENST00000566600 BRD3Q15059 726 aa25.53■■□□□ 1.68
NME3-209ENST00000566600 ZNF789Q5FWF6 425 aa25.53■■□□□ 1.68
NME3-209ENST00000566600 CCNI2Q6ZMN8 369 aaPredicted RBP25.53■■□□□ 1.68
NME3-209ENST00000566600 OTOAQ7RTW8 1153 aa25.53■■□□□ 1.68
NME3-209ENST00000566600 GALNT7Q86SF2 657 aa25.53■■□□□ 1.68
NME3-209ENST00000566600 PIM3Q86V86 326 aa25.53■■□□□ 1.68
NME3-209ENST00000566600 ZNF761Q86XN6 746 aaPredicted RBP25.53■■□□□ 1.68
NME3-209ENST00000566600 MSRB2Q9Y3D2 182 aa25.53■■□□□ 1.68
NME3-209ENST00000566600 CFAP20Q9Y6A4 193 aaKnown RBP25.53■■□□□ 1.68
NME3-209ENST00000566600 E5RI56 91 aa25.52■■□□□ 1.68
NME3-209ENST00000566600 CSO75390 466 aaKnown RBP25.52■■□□□ 1.68
NME3-209ENST00000566600 CHRM3P20309 590 aa25.52■■□□□ 1.68
NME3-209ENST00000566600 CLDN6P56747 220 aa25.52■■□□□ 1.68
NME3-209ENST00000566600 MGAT5Q09328 741 aa25.52■■□□□ 1.68
NME3-209ENST00000566600 HSPA14Q0VDF9 509 aa25.52■■□□□ 1.68
NME3-209ENST00000566600 TARDBPQ13148 414 aaKnown RBP eCLIP25.52■■□□□ 1.68
NME3-209ENST00000566600 GPR18Q14330 331 aa25.52■■□□□ 1.68
NME3-209ENST00000566600 MAP9Q49MG5 647 aa25.52■■□□□ 1.68
NME3-209ENST00000566600 TEDDM1Q5T9Z0 273 aa25.52■■□□□ 1.68
NME3-209ENST00000566600 TRMT10BQ6PF06 316 aaKnown RBP25.52■■□□□ 1.68
NME3-209ENST00000566600 LKAAEAR1Q8TD35 194 aa25.52■■□□□ 1.68
NME3-209ENST00000566600 TMEM74Q96NL1 305 aa25.52■■□□□ 1.68
NME3-209ENST00000566600 MVB12BQ9H7P6 319 aa25.52■■□□□ 1.68
NME3-209ENST00000566600 MOCS1Q9NZB8 636 aa25.52■■□□□ 1.68
NME3-209ENST00000566600 FAM149AA5PLN7 773 aa25.51■■□□□ 1.67
NME3-209ENST00000566600 GPC4O75487 556 aa25.51■■□□□ 1.67
NME3-209ENST00000566600 HAUS5O94927 633 aa25.51■■□□□ 1.67
NME3-209ENST00000566600 SPINK2P20155 84 aa25.51■■□□□ 1.67
NME3-209ENST00000566600 MAGEA4P43358 317 aa25.51■■□□□ 1.67
NME3-209ENST00000566600 MPP1Q00013 466 aa25.51■■□□□ 1.67
NME3-209ENST00000566600 ISXQ2M1V0 245 aa25.51■■□□□ 1.67
NME3-209ENST00000566600 PLEKHS1Q5SXH7 462 aa25.51■■□□□ 1.67
NME3-209ENST00000566600 SLC22A15Q8IZD6 547 aa25.51■■□□□ 1.67
NME3-209ENST00000566600 IFT81Q8WYA0 676 aa25.51■■□□□ 1.67
NME3-209ENST00000566600 TFGQ92734 400 aaPredicted RBP25.51■■□□□ 1.67
NME3-209ENST00000566600 LATS2Q9NRM7 1088 aa25.51■■□□□ 1.67
NME3-209ENST00000566600 NSMCE4AQ9NXX6 385 aa25.51■■□□□ 1.67
NME3-209ENST00000566600 ZFATQ9P243 1243 aa25.51■■□□□ 1.67
NME3-209ENST00000566600 ATXN7L1Q9ULK2 861 aaPredicted RBP25.51■■□□□ 1.67
NME3-209ENST00000566600 NIPSNAP2O75323 286 aa25.5■■□□□ 1.67
NME3-209ENST00000566600 SLCO2B1O94956 709 aa25.5■■□□□ 1.67
NME3-209ENST00000566600 CSE1LP55060 971 aaKnown RBP25.5■■□□□ 1.67
NME3-209ENST00000566600 CUL1Q13616 776 aa25.5■■□□□ 1.67
NME3-209ENST00000566600 KLHL35Q6PF15 583 aa25.5■■□□□ 1.67
NME3-209ENST00000566600 NAPRTQ6XQN6 538 aa25.5■■□□□ 1.67
NME3-209ENST00000566600 USP53Q70EK8 1073 aa25.5■■□□□ 1.67
NME3-209ENST00000566600 CYS1Q717R9 158 aa25.5■■□□□ 1.67
NME3-209ENST00000566600 IFT20Q8IY31 132 aa25.5■■□□□ 1.67
NME3-209ENST00000566600 KCNJ9Q92806 393 aa25.5■■□□□ 1.67
NME3-209ENST00000566600 FERD3LQ96RJ6 166 aa25.5■■□□□ 1.67
NME3-209ENST00000566600 TBC1D10AQ9BXI6 508 aa25.5■■□□□ 1.67
NME3-209ENST00000566600 ZMYND15Q9H091 742 aa25.5■■□□□ 1.67
NME3-209ENST00000566600 KIR3DX1Q9H7L2 352 aa25.5■■□□□ 1.67
NME3-209ENST00000566600 KLHL42Q9P2K6 505 aa25.5■■□□□ 1.67
NME3-209ENST00000566600 UNC13CQ8NB66 2214 aa25.49■■□□□ 1.67
NME3-209ENST00000566600 CASC3O15234 703 aaKnown RBP25.49■■□□□ 1.67
NME3-209ENST00000566600 UBXN7O94888 489 aa25.49■■□□□ 1.67
NME3-209ENST00000566600 ACADLP28330 430 aa25.49■■□□□ 1.67
NME3-209ENST00000566600 MAPK9P45984 424 aa25.49■■□□□ 1.67
NME3-209ENST00000566600 ILF2Q12905 390 aaKnown RBP25.49■■□□□ 1.67
NME3-209ENST00000566600 PLCL1Q15111 1095 aa25.49■■□□□ 1.67
NME3-209ENST00000566600 NKAIN2Q5VXU1 208 aa25.49■■□□□ 1.67
NME3-209ENST00000566600 CNSTQ6PJW8 725 aa25.49■■□□□ 1.67
NME3-209ENST00000566600 WDR74Q6RFH5 385 aaPredicted RBP25.49■■□□□ 1.67
NME3-209ENST00000566600 CDKL2Q92772 493 aa25.49■■□□□ 1.67
NME3-209ENST00000566600 STRADBQ9C0K7 418 aa25.49■■□□□ 1.67
NME3-209ENST00000566600 CORO1CQ9ULV4 474 aaPredicted RBP25.49■■□□□ 1.67
NME3-209ENST00000566600 CDYLQ9Y232 598 aa25.49■■□□□ 1.67
NME3-209ENST00000566600 KNTC1P50748 2209 aa25.48■■□□□ 1.67
NME3-209ENST00000566600 PRAMEF33A0A0G2JMD5 474 aa25.48■■□□□ 1.67
NME3-209ENST00000566600 SPAG6O75602 509 aa25.48■■□□□ 1.67
NME3-209ENST00000566600 AHSGP02765 367 aa25.48■■□□□ 1.67
NME3-209ENST00000566600 RPN2P04844 631 aa25.48■■□□□ 1.67
NME3-209ENST00000566600 PROS1P07225 676 aa25.48■■□□□ 1.67
NME3-209ENST00000566600 AMD1P17707 334 aa25.48■■□□□ 1.67
NME3-209ENST00000566600 ATP5DP30049 168 aa25.48■■□□□ 1.67
NME3-209ENST00000566600 SSTR1P30872 391 aa25.48■■□□□ 1.67
NME3-209ENST00000566600 CCKBRP32239 447 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms