RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 TMEM202A6NGA9 273 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 EIF4E1BA6NMX2 242 aaKnown RBP3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 HNRNPCL3B7ZW38 293 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 H0YIZ8 118 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 O00370 1275 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 RNASET2O00584 256 aaKnown RBP3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 PPP6CO00743 305 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 MAP2K7O14733 419 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 CASQ2O14958 399 aaPredicted RBP3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 XRCC3O43542 346 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 FCGR3BO75015 233 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 FAM20BO75063 409 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 CCDC159P0C7I6 412 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 PLA2G4BP0C869 781 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 HNRNPCL4P0DMR1 293 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 SPP1P10451 314 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 G6PDP11413 515 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 CD22P20273 847 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 HNRNPA2B1P22626 353 aaKnown RBP3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 GLRA2P23416 452 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 CCNCP24863 283 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 HOXD9P28356 352 aaPredicted RBP3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 CCND2P30279 289 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 PKLRP30613 574 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 AKT2P31751 481 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 IDUAP35475 653 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 CXCR3P49682 368 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 SELENOPP49908 381 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 SNRPEP62304 92 aaKnown RBP3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 MECOMQ03112 1051 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 IL24Q13007 206 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 SCGB2A2Q13296 93 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 TNK1Q13470 666 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 GIT2Q14161 759 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 MEP1AQ16819 746 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 PFKFB3Q16875 520 aaPredicted RBP3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 CDO1Q16878 200 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 TXNRD1Q16881 649 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 KRT24Q2M2I5 525 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 PLK5Q496M5 336 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 HERC4Q5GLZ8 1057 aaPredicted RBP3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 TSTD2Q5T7W7 516 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 ATAD3BQ5T9A4 648 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 SIGIRRQ6IA17 410 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 CYB5D1Q6P9G0 228 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 ZNF474Q6S9Z5 364 aaPredicted RBP3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 FIP1L1Q6UN15 594 aaKnown RBP3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 CYB5R4Q7L1T6 521 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 PRSS42Q7Z5A4 293 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 SYVN1Q86TM6 617 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 DNAJC10Q8IXB1 793 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 DDIASQ8IXT1 998 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 ZDHHC23Q8IYP9 409 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 FUKQ8N0W3 1084 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 PAQR4Q8N4S7 273 aaPredicted RBP3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 LRRC57Q8N9N7 239 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 BOLLQ8N9W6 283 aaKnown RBP3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 L3MBTL4Q8NA19 623 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 TMEM185AQ8NFB2 350 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 SLC24A4Q8NFF2 622 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 OR56B2PQ8NGI1 322 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 OR52N4Q8NGI2 321 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 OR2AJ1Q8NGZ0 328 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 TBC1D16Q8TBP0 767 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 FIG4Q92562 907 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 SLC9A6Q92581 669 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 RAD54LQ92698 747 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 CASP10Q92851 521 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 RFKQ969G6 155 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 TMEM186Q96B77 213 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 CCDC51Q96ER9 411 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 C16orf58Q96GQ5 468 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 CDKN2AIPNLQ96HQ2 116 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 KAZALD1Q96I82 304 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 PGBD1Q96JS3 809 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 SFXN2Q96NB2 322 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 SLITRK1Q96PX8 696 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 ASCL2Q99929 193 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 ZNF577Q9BSK1 485 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 EDEM2Q9BV94 578 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 TMEM117Q9H0C3 514 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 CUEDC2Q9H467 287 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 YY1AP1Q9H869 796 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 CPNE5Q9HCH3 593 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 MYNNQ9NPC7 610 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 HINT3Q9NQE9 182 aaKnown RBP3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 ZCCHC3Q9NUD5 404 aaKnown RBP3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 DDX18Q9NVP1 670 aaKnown RBP3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 DLL3Q9NYJ7 618 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 TMOD3Q9NYL9 352 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 STK39Q9UEW8 545 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 UBQLN2Q9UHD9 624 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 IPO11Q9UI26 975 aaKnown RBP3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 MAD2L2Q9UI95 211 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 ING1Q9UK53 422 aaPredicted RBP3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 TMED5Q9Y3A6 229 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 RAP2CQ9Y3L5 183 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 NAALAD2Q9Y3Q0 740 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 TMEM184BQ9Y519 407 aaPredicted RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms