RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 FAM118BQ9BPY3 351 aa18.31■□□□□ 0.52
ABCA3-204ENST00000566200 TLR10Q9BXR5 811 aa18.31■□□□□ 0.52
ABCA3-204ENST00000566200 FAM96AQ9H5X1 160 aa18.31■□□□□ 0.52
ABCA3-204ENST00000566200 ARGFXA6NJG6 315 aa18.3■□□□□ 0.52
ABCA3-204ENST00000566200 SLC9B1P1A6NJY1 282 aa18.3■□□□□ 0.52
ABCA3-204ENST00000566200 CCL22O00626 93 aa18.3■□□□□ 0.52
ABCA3-204ENST00000566200 SPTBP11277 2137 aa18.3■□□□□ 0.52
ABCA3-204ENST00000566200 GP1BBP13224 206 aa18.3■□□□□ 0.52
ABCA3-204ENST00000566200 RORAP35398 523 aa18.3■□□□□ 0.52
ABCA3-204ENST00000566200 UQCRFS1P47985 274 aa18.3■□□□□ 0.52
ABCA3-204ENST00000566200 RPS15P62841 145 aaKnown RBP18.3■□□□□ 0.52
ABCA3-204ENST00000566200 OTUD4Q01804 1114 aaKnown RBP18.3■□□□□ 0.52
ABCA3-204ENST00000566200 ANKRD20A2Q5SQ80 823 aa18.3■□□□□ 0.52
ABCA3-204ENST00000566200 ANKRD20A1Q5TYW2 823 aa18.3■□□□□ 0.52
ABCA3-204ENST00000566200 FAM69BQ5VUD6 431 aa18.3■□□□□ 0.52
ABCA3-204ENST00000566200 ANKRD20A3Q5VUR7 823 aa18.3■□□□□ 0.52
ABCA3-204ENST00000566200 IZUMO3Q5VZ72 239 aa18.3■□□□□ 0.52
ABCA3-204ENST00000566200 ITPRIPL1Q6GPH6 555 aa18.3■□□□□ 0.52
ABCA3-204ENST00000566200 ARMC6Q6NXE6 501 aa18.3■□□□□ 0.52
ABCA3-204ENST00000566200 NXPE1Q8N323 547 aa18.3■□□□□ 0.52
ABCA3-204ENST00000566200 OR8K5Q8NH50 307 aa18.3■□□□□ 0.52
ABCA3-204ENST00000566200 HM13Q8TCT9 377 aa18.3■□□□□ 0.52
ABCA3-204ENST00000566200 SEC14L1Q92503 715 aa18.3■□□□□ 0.52
ABCA3-204ENST00000566200 LRFN5Q96NI6 719 aa18.3■□□□□ 0.52
ABCA3-204ENST00000566200 SOHLH2Q9NX45 425 aa18.3■□□□□ 0.52
ABCA3-204ENST00000566200 PCDHA13Q9Y5I0 950 aa18.3■□□□□ 0.52
ABCA3-204ENST00000566200 USP9XQ93008 2570 aaPredicted RBP18.29■□□□□ 0.52
ABCA3-204ENST00000566200 MEN1O00255 615 aa18.29■□□□□ 0.52
ABCA3-204ENST00000566200 CAPN1P07384 714 aa18.29■□□□□ 0.52
ABCA3-204ENST00000566200 PTGIRP43119 386 aa18.29■□□□□ 0.52
ABCA3-204ENST00000566200 CDKN1CP49918 316 aaPredicted RBP18.29■□□□□ 0.52
ABCA3-204ENST00000566200 TMPRSS15P98073 1019 aa18.29■□□□□ 0.52
ABCA3-204ENST00000566200 PDE1BQ01064 536 aa18.29■□□□□ 0.52
ABCA3-204ENST00000566200 GSE1Q14687 1217 aa18.29■□□□□ 0.52
ABCA3-204ENST00000566200 NADK2Q4G0N4 442 aa18.29■□□□□ 0.52
ABCA3-204ENST00000566200 ATCAYQ86WG3 371 aa18.29■□□□□ 0.52
ABCA3-204ENST00000566200 DSELQ8IZU8 1212 aa18.29■□□□□ 0.52
ABCA3-204ENST00000566200 ACVR1CQ8NER5 493 aa18.29■□□□□ 0.52
ABCA3-204ENST00000566200 OR1L3Q8NH93 324 aa18.29■□□□□ 0.52
ABCA3-204ENST00000566200 SLC25A23Q9BV35 468 aa18.29■□□□□ 0.52
ABCA3-204ENST00000566200 OR52A5Q9H2C5 316 aa18.29■□□□□ 0.52
ABCA3-204ENST00000566200 TSPY26PQ9H489 355 aa18.29■□□□□ 0.52
ABCA3-204ENST00000566200 C1GALT1Q9NS00 363 aa18.29■□□□□ 0.52
ABCA3-204ENST00000566200 CRLS1Q9UJA2 301 aa18.29■□□□□ 0.52
ABCA3-204ENST00000566200 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.29■□□□□ 0.52
ABCA3-204ENST00000566200 PCDHGA9Q9Y5G4 932 aaKnown RBP18.29■□□□□ 0.52
ABCA3-204ENST00000566200 COLEC10Q9Y6Z7 277 aa18.29■□□□□ 0.52
ABCA3-204ENST00000566200 UTP20O75691 2785 aaKnown RBP18.29■□□□□ 0.52
ABCA3-204ENST00000566200 IGLV3-16A0A075B6K0 115 aa18.28■□□□□ 0.52
ABCA3-204ENST00000566200 RCCD1A6NED2 376 aa18.28■□□□□ 0.52
ABCA3-204ENST00000566200 BTN3A3O00478 584 aa18.28■□□□□ 0.52
ABCA3-204ENST00000566200 BTN3A1O00481 513 aa18.28■□□□□ 0.52
ABCA3-204ENST00000566200 PJA2O43164 708 aa18.28■□□□□ 0.52
ABCA3-204ENST00000566200 LDB2O43679 373 aa18.28■□□□□ 0.52
ABCA3-204ENST00000566200 PRSS56P0CW18 603 aa18.28■□□□□ 0.52
ABCA3-204ENST00000566200 PYGMP11217 842 aa18.28■□□□□ 0.52
ABCA3-204ENST00000566200 ST6GAL1P15907 406 aa18.28■□□□□ 0.52
ABCA3-204ENST00000566200 CDH3P22223 829 aa18.28■□□□□ 0.52
ABCA3-204ENST00000566200 NDUFS1P28331 727 aa18.28■□□□□ 0.52
ABCA3-204ENST00000566200 CTNNA1P35221 906 aaKnown RBP18.28■□□□□ 0.52
ABCA3-204ENST00000566200 CCL11P51671 97 aa18.28■□□□□ 0.52
ABCA3-204ENST00000566200 SPARCL1Q14515 664 aa18.28■□□□□ 0.52
ABCA3-204ENST00000566200 TMTC4Q5T4D3 741 aa18.28■□□□□ 0.52
ABCA3-204ENST00000566200 PAPD7Q5XG87 772 aaKnown RBP18.28■□□□□ 0.52
ABCA3-204ENST00000566200 AADACL2Q6P093 401 aa18.28■□□□□ 0.52
ABCA3-204ENST00000566200 KLHDC8BQ8IXV7 354 aa18.28■□□□□ 0.52
ABCA3-204ENST00000566200 ENDOVQ8N8Q3 282 aaKnown RBP18.28■□□□□ 0.52
ABCA3-204ENST00000566200 CCDC110Q8TBZ0 833 aa18.28■□□□□ 0.52
ABCA3-204ENST00000566200 COPS8Q99627 209 aa18.28■□□□□ 0.52
ABCA3-204ENST00000566200 CCM2Q9BSQ5 444 aa18.28■□□□□ 0.52
ABCA3-204ENST00000566200 PITPNM3Q9BZ71 974 aa18.28■□□□□ 0.52
ABCA3-204ENST00000566200 ING2Q9H160 280 aa18.28■□□□□ 0.52
ABCA3-204ENST00000566200 COG4Q9H9E3 785 aa18.28■□□□□ 0.52
ABCA3-204ENST00000566200 ARNT2Q9HBZ2 717 aa18.28■□□□□ 0.52
ABCA3-204ENST00000566200 PCMTD2Q9NV79 361 aa18.28■□□□□ 0.52
ABCA3-204ENST00000566200 AAR2Q9Y312 384 aaKnown RBP18.28■□□□□ 0.52
ABCA3-204ENST00000566200 PCDHA3Q9Y5H8 950 aa18.28■□□□□ 0.52
ABCA3-204ENST00000566200 USP9YO00507 2555 aaPredicted RBP18.28■□□□□ 0.52
ABCA3-204ENST00000566200 SHANK1Q9Y566 2161 aa18.27■□□□□ 0.52
ABCA3-204ENST00000566200 NBPF19A0A087WUL8 3843 aa18.27■□□□□ 0.52
ABCA3-204ENST00000566200 TRBV5-4A0A0C4DH59 114 aa18.27■□□□□ 0.52
ABCA3-204ENST00000566200 C17orf113A0A1B0GUU1 675 aa18.27■□□□□ 0.52
ABCA3-204ENST00000566200 CCDC66A2RUB6 948 aa18.27■□□□□ 0.52
ABCA3-204ENST00000566200 BLACEA4D250 179 aa18.27■□□□□ 0.52
ABCA3-204ENST00000566200 KCNN4O15554 427 aa18.27■□□□□ 0.52
ABCA3-204ENST00000566200 CEACAM4O75871 244 aa18.27■□□□□ 0.52
ABCA3-204ENST00000566200 CRTAMO95727 393 aa18.27■□□□□ 0.52
ABCA3-204ENST00000566200 RAB40ALP0C0E4 278 aa18.27■□□□□ 0.52
ABCA3-204ENST00000566200 RBP3P10745 1247 aa18.27■□□□□ 0.52
ABCA3-204ENST00000566200 ATP1B2P14415 290 aaPredicted RBP18.27■□□□□ 0.52
ABCA3-204ENST00000566200 PDHA2P29803 388 aa18.27■□□□□ 0.52
ABCA3-204ENST00000566200 PRDX3P30048 256 aaKnown RBP18.27■□□□□ 0.52
ABCA3-204ENST00000566200 PTPN7P35236 360 aa18.27■□□□□ 0.52
ABCA3-204ENST00000566200 PGDP52209 483 aa18.27■□□□□ 0.52
ABCA3-204ENST00000566200 GSDMDP57764 484 aa18.27■□□□□ 0.52
ABCA3-204ENST00000566200 EIF3EP60228 445 aaKnown RBP18.27■□□□□ 0.52
ABCA3-204ENST00000566200 COPS2P61201 443 aa18.27■□□□□ 0.52
ABCA3-204ENST00000566200 FAM198BQ6UWH4 519 aa18.27■□□□□ 0.52
ABCA3-204ENST00000566200 SNX20Q7Z614 316 aa18.27■□□□□ 0.52
ABCA3-204ENST00000566200 CDKL3Q8IVW4 592 aaPredicted RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms