RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 ASB1Q9Y576 335 aa19.18■□□□□ 0.66
CLN6-205ENST00000564846 DNAJC15Q9Y5T4 150 aa19.18■□□□□ 0.66
CLN6-205ENST00000564846 SLC5A10A0PJK1 596 aa19.17■□□□□ 0.66
CLN6-205ENST00000564846 SLC22A2O15244 555 aa19.17■□□□□ 0.66
CLN6-205ENST00000564846 TAPBPO15533 448 aa19.17■□□□□ 0.66
CLN6-205ENST00000564846 CRCPO75575 148 aa19.17■□□□□ 0.66
CLN6-205ENST00000564846 NQO1P15559 274 aaKnown RBP19.17■□□□□ 0.66
CLN6-205ENST00000564846 CYP2A7P20853 494 aa19.17■□□□□ 0.66
CLN6-205ENST00000564846 ADSLP30566 484 aaPredicted RBP19.17■□□□□ 0.66
CLN6-205ENST00000564846 CDC16Q13042 620 aa19.17■□□□□ 0.66
CLN6-205ENST00000564846 CCDC85BQ15834 202 aaPredicted RBP19.17■□□□□ 0.66
CLN6-205ENST00000564846 GPRIN3Q6ZVF9 776 aa19.17■□□□□ 0.66
CLN6-205ENST00000564846 EFL1Q7Z2Z2 1120 aaKnown RBP19.17■□□□□ 0.66
CLN6-205ENST00000564846 TRIM74Q86UV6 250 aa19.17■□□□□ 0.66
CLN6-205ENST00000564846 CPSF7Q8N684 471 aaKnown RBP19.17■□□□□ 0.66
CLN6-205ENST00000564846 C19orf60Q96EN9 201 aa19.17■□□□□ 0.66
CLN6-205ENST00000564846 LINC00615Q96LM1 132 aaPredicted RBP19.17■□□□□ 0.66
CLN6-205ENST00000564846 NUSAP1Q9BXS6 441 aaKnown RBP19.17■□□□□ 0.66
CLN6-205ENST00000564846 OR2AG1Q9H205 316 aa19.17■□□□□ 0.66
CLN6-205ENST00000564846 CD248Q9HCU0 757 aa19.17■□□□□ 0.66
CLN6-205ENST00000564846 ARL15Q9NXU5 204 aa19.17■□□□□ 0.66
CLN6-205ENST00000564846 GPR34Q9UPC5 381 aa19.17■□□□□ 0.66
CLN6-205ENST00000564846 SOX1O00570 391 aaPredicted RBP19.16■□□□□ 0.66
CLN6-205ENST00000564846 DCXO43602 365 aa19.16■□□□□ 0.66
CLN6-205ENST00000564846 PLRG1O43660 514 aaKnown RBP19.16■□□□□ 0.66
CLN6-205ENST00000564846 MATN4O95460 622 aa19.16■□□□□ 0.66
CLN6-205ENST00000564846 C7P10643 843 aa19.16■□□□□ 0.66
CLN6-205ENST00000564846 COL9A1P20849 921 aa19.16■□□□□ 0.66
CLN6-205ENST00000564846 HSPA7P48741 367 aa19.16■□□□□ 0.66
CLN6-205ENST00000564846 HNMTP50135 292 aa19.16■□□□□ 0.66
CLN6-205ENST00000564846 RPS21P63220 83 aaKnown RBP19.16■□□□□ 0.66
CLN6-205ENST00000564846 GTF2H2Q13888 395 aa19.16■□□□□ 0.66
CLN6-205ENST00000564846 WSCD2Q2TBF2 565 aa19.16■□□□□ 0.66
CLN6-205ENST00000564846 KIAA1161Q6NSJ0 714 aa19.16■□□□□ 0.66
CLN6-205ENST00000564846 GTF2H2CQ6P1K8 395 aa19.16■□□□□ 0.66
CLN6-205ENST00000564846 GOLGA7Q7Z5G4 137 aa19.16■□□□□ 0.66
CLN6-205ENST00000564846 RASGRP3Q8IV61 690 aa19.16■□□□□ 0.66
CLN6-205ENST00000564846 KIF2BQ8N4N8 673 aa19.16■□□□□ 0.66
CLN6-205ENST00000564846 PLA2G15Q8NCC3 412 aa19.16■□□□□ 0.66
CLN6-205ENST00000564846 TWIST2Q8WVJ9 160 aa19.16■□□□□ 0.66
CLN6-205ENST00000564846 PPM1EQ8WY54 764 aa19.16■□□□□ 0.66
CLN6-205ENST00000564846 COX14Q96I36 57 aa19.16■□□□□ 0.66
CLN6-205ENST00000564846 ATXN10Q9UBB4 475 aa19.16■□□□□ 0.66
CLN6-205ENST00000564846 PRDM4Q9UKN5 801 aa19.16■□□□□ 0.66
CLN6-205ENST00000564846 TMEM202A6NGA9 273 aa19.16■□□□□ 0.66
CLN6-205ENST00000564846 LILRB5O75023 590 aa19.16■□□□□ 0.66
CLN6-205ENST00000564846 PCCBP05166 539 aa19.16■□□□□ 0.66
CLN6-205ENST00000564846 ASGR2P07307 311 aa19.16■□□□□ 0.66
CLN6-205ENST00000564846 UROSP10746 265 aa19.16■□□□□ 0.66
CLN6-205ENST00000564846 TEAD1P28347 426 aa19.16■□□□□ 0.66
CLN6-205ENST00000564846 FOXA1P55317 472 aa19.16■□□□□ 0.66
CLN6-205ENST00000564846 AP1S2P56377 157 aa19.16■□□□□ 0.66
CLN6-205ENST00000564846 KCNJ2P63252 427 aa19.16■□□□□ 0.66
CLN6-205ENST00000564846 SMAD2Q15796 467 aaKnown RBP19.16■□□□□ 0.66
CLN6-205ENST00000564846 C18orf21Q32NC0 220 aaPredicted RBP19.16■□□□□ 0.66
CLN6-205ENST00000564846 TTC31Q49AM3 519 aaPredicted RBP19.16■□□□□ 0.66
CLN6-205ENST00000564846 SYVN1Q86TM6 617 aa19.16■□□□□ 0.66
CLN6-205ENST00000564846 TRAPPC5Q8IUR0 188 aa19.16■□□□□ 0.66
CLN6-205ENST00000564846 MCOLN3Q8TDD5 553 aa19.16■□□□□ 0.66
CLN6-205ENST00000564846 CMTM5Q96DZ9 223 aa19.16■□□□□ 0.66
CLN6-205ENST00000564846 LENG8Q96PV6 779 aaPredicted RBP19.16■□□□□ 0.66
CLN6-205ENST00000564846 TMEM79Q9BSE2 394 aa19.16■□□□□ 0.66
CLN6-205ENST00000564846 BTBD10Q9BSF8 475 aa19.16■□□□□ 0.66
CLN6-205ENST00000564846 NOL11Q9H8H0 719 aaKnown RBP19.16■□□□□ 0.66
CLN6-205ENST00000564846 OPTCQ9UBM4 332 aa19.16■□□□□ 0.66
CLN6-205ENST00000564846 A0A1B0GTL3 188 aa19.15■□□□□ 0.66
CLN6-205ENST00000564846 C17orf113A0A1B0GUU1 675 aa19.15■□□□□ 0.66
CLN6-205ENST00000564846 LIN7AO14910 233 aaPredicted RBP19.15■□□□□ 0.66
CLN6-205ENST00000564846 CHEK2O96017 543 aa19.15■□□□□ 0.66
CLN6-205ENST00000564846 PRDX6P30041 224 aa19.15■□□□□ 0.66
CLN6-205ENST00000564846 GGT5P36269 586 aa19.15■□□□□ 0.66
CLN6-205ENST00000564846 PIK3CGP48736 1102 aa19.15■□□□□ 0.66
CLN6-205ENST00000564846 MNAT1P51948 309 aa19.15■□□□□ 0.66
CLN6-205ENST00000564846 PLOD1Q02809 727 aaPredicted RBP19.15■□□□□ 0.66
CLN6-205ENST00000564846 SFSWAPQ12872 951 aaKnown RBP19.15■□□□□ 0.66
CLN6-205ENST00000564846 KLF10Q13118 480 aa19.15■□□□□ 0.66
CLN6-205ENST00000564846 ZNF658BQ4V348 819 aaPredicted RBP19.15■□□□□ 0.66
CLN6-205ENST00000564846 EOGTQ5NDL2 527 aa19.15■□□□□ 0.66
CLN6-205ENST00000564846 IER5LQ5T953 404 aa19.15■□□□□ 0.66
CLN6-205ENST00000564846 HEATR4Q86WZ0 1026 aa19.15■□□□□ 0.66
CLN6-205ENST00000564846 CHCHD4Q8N4Q1 142 aa19.15■□□□□ 0.66
CLN6-205ENST00000564846 TEX9Q8N6V9 391 aa19.15■□□□□ 0.66
CLN6-205ENST00000564846 OR14C36Q8NHC7 312 aa19.15■□□□□ 0.66
CLN6-205ENST00000564846 RAB3IPQ96QF0 476 aaPredicted RBP19.15■□□□□ 0.66
CLN6-205ENST00000564846 ZNF385DQ9H6B1 395 aa19.15■□□□□ 0.66
CLN6-205ENST00000564846 PFDN4Q9NQP4 134 aa19.15■□□□□ 0.66
CLN6-205ENST00000564846 SLC2A4RGQ9NR83 387 aa19.15■□□□□ 0.66
CLN6-205ENST00000564846 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.15■□□□□ 0.66
CLN6-205ENST00000564846 FZD4Q9ULV1 537 aa19.15■□□□□ 0.66
CLN6-205ENST00000564846 ZFR2Q9UPR6 939 aaKnown RBP19.15■□□□□ 0.66
CLN6-205ENST00000564846 F5P12259 2224 aa19.14■□□□□ 0.66
CLN6-205ENST00000564846 K7EPI3 171 aa19.14■□□□□ 0.66
CLN6-205ENST00000564846 NARSO43776 548 aaKnown RBP19.14■□□□□ 0.66
CLN6-205ENST00000564846 STK16O75716 305 aa19.14■□□□□ 0.66
CLN6-205ENST00000564846 OTCP00480 354 aa19.14■□□□□ 0.66
CLN6-205ENST00000564846 ZNF8P17098 575 aaPredicted RBP19.14■□□□□ 0.66
CLN6-205ENST00000564846 PRDX3P30048 256 aaKnown RBP19.14■□□□□ 0.66
CLN6-205ENST00000564846 CCR3P51677 355 aa19.14■□□□□ 0.66
CLN6-205ENST00000564846 USP30Q70CQ3 517 aa19.14■□□□□ 0.66
CLN6-205ENST00000564846 CHSY3Q70JA7 882 aa19.14■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms