RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 CNTFP26441 200 aa3.95□□□□□ -1.78
CHD9-212ENST00000564641 GGT5P36269 586 aa3.95□□□□□ -1.78
CHD9-212ENST00000564641 APOBEC1P41238 236 aaKnown RBP3.95□□□□□ -1.78
CHD9-212ENST00000564641 IRX1P78414 480 aaPredicted RBP3.95□□□□□ -1.78
CHD9-212ENST00000564641 DMTNQ08495 405 aa3.95□□□□□ -1.78
CHD9-212ENST00000564641 DCTN2Q13561 401 aaKnown RBP3.95□□□□□ -1.78
CHD9-212ENST00000564641 PDE1CQ14123 709 aaPredicted RBP3.95□□□□□ -1.78
CHD9-212ENST00000564641 BECN1Q14457 450 aa3.95□□□□□ -1.78
CHD9-212ENST00000564641 PRICKLE4Q2TBC4 344 aa3.95□□□□□ -1.78
CHD9-212ENST00000564641 RBMS3Q6XE24 437 aaKnown RBP3.95□□□□□ -1.78
CHD9-212ENST00000564641 C4orf50Q6ZRC1 276 aa3.95□□□□□ -1.78
CHD9-212ENST00000564641 TBC1D1Q86TI0 1168 aaPredicted RBP3.95□□□□□ -1.78
CHD9-212ENST00000564641 GTSCR1Q86UQ5 136 aa3.95□□□□□ -1.78
CHD9-212ENST00000564641 ADSSL1Q8N142 457 aa3.95□□□□□ -1.78
CHD9-212ENST00000564641 RFFLQ8WZ73 363 aa3.95□□□□□ -1.78
CHD9-212ENST00000564641 COG3Q96JB2 828 aa3.95□□□□□ -1.78
CHD9-212ENST00000564641 NEUROD6Q96NK8 337 aa3.95□□□□□ -1.78
CHD9-212ENST00000564641 TREX2Q9BQ50 279 aaPredicted RBP3.95□□□□□ -1.78
CHD9-212ENST00000564641 BICC1Q9H694 974 aaKnown RBP3.95□□□□□ -1.78
CHD9-212ENST00000564641 ERVMER34-1Q9H9K5 563 aa3.95□□□□□ -1.78
CHD9-212ENST00000564641 TBC1D22BQ9NU19 505 aa3.95□□□□□ -1.78
CHD9-212ENST00000564641 ACAD8Q9UKU7 415 aa3.95□□□□□ -1.78
CHD9-212ENST00000564641 ZHX1Q9UKY1 873 aaPredicted RBP3.95□□□□□ -1.78
CHD9-212ENST00000564641 SARDHQ9UL12 918 aa3.95□□□□□ -1.78
CHD9-212ENST00000564641 SBF2Q86WG5 1849 aa3.95□□□□□ -1.78
CHD9-212ENST00000564641 LRRC37A3O60309 1634 aa3.95□□□□□ -1.78
CHD9-212ENST00000564641 EDC4Q6P2E9 1401 aaKnown RBP3.95□□□□□ -1.78
CHD9-212ENST00000564641 TTC21BQ7Z4L5 1316 aa3.95□□□□□ -1.78
CHD9-212ENST00000564641 A0A087X0M5 115 aa3.94□□□□□ -1.78
CHD9-212ENST00000564641 A0A1B0GX30 115 aa3.94□□□□□ -1.78
CHD9-212ENST00000564641 LDLRAD4O15165 306 aa3.94□□□□□ -1.78
CHD9-212ENST00000564641 CTCFP49711 727 aaPredicted RBP3.94□□□□□ -1.78
CHD9-212ENST00000564641 KRTAP10-3P60369 221 aa3.94□□□□□ -1.78
CHD9-212ENST00000564641 COG7P83436 770 aa3.94□□□□□ -1.78
CHD9-212ENST00000564641 RUNX1T1Q06455 604 aa3.94□□□□□ -1.78
CHD9-212ENST00000564641 GALNT2Q10471 571 aa3.94□□□□□ -1.78
CHD9-212ENST00000564641 PTP4A2Q12974 167 aa3.94□□□□□ -1.78
CHD9-212ENST00000564641 PRKG2Q13237 762 aa3.94□□□□□ -1.78
CHD9-212ENST00000564641 KCTD2Q14681 263 aa3.94□□□□□ -1.78
CHD9-212ENST00000564641 COL28A1Q2UY09 1125 aa3.94□□□□□ -1.78
CHD9-212ENST00000564641 ZC2HC1CQ53FD0 456 aaPredicted RBP3.94□□□□□ -1.78
CHD9-212ENST00000564641 KRTCAP3Q53RY4 240 aa3.94□□□□□ -1.78
CHD9-212ENST00000564641 SPATA1Q5VX52 437 aa3.94□□□□□ -1.78
CHD9-212ENST00000564641 CFAP161Q6P656 301 aa3.94□□□□□ -1.78
CHD9-212ENST00000564641 EXOC6Q8TAG9 804 aa3.94□□□□□ -1.78
CHD9-212ENST00000564641 HMGCLL1Q8TB92 370 aa3.94□□□□□ -1.78
CHD9-212ENST00000564641 GTF3C6Q969F1 213 aa3.94□□□□□ -1.78
CHD9-212ENST00000564641 RRNAD1Q96FB5 475 aaKnown RBP3.94□□□□□ -1.78
CHD9-212ENST00000564641 C7orf26Q96N11 449 aa3.94□□□□□ -1.78
CHD9-212ENST00000564641 OPRPNQ99935 248 aaPredicted RBP3.94□□□□□ -1.78
CHD9-212ENST00000564641 AGXT2Q9BYV1 514 aa3.94□□□□□ -1.78
CHD9-212ENST00000564641 UBXN6Q9BZV1 441 aa3.94□□□□□ -1.78
CHD9-212ENST00000564641 OR14J1Q9UGF5 321 aa3.94□□□□□ -1.78
CHD9-212ENST00000564641 NRBP1Q9UHY1 535 aa3.94□□□□□ -1.78
CHD9-212ENST00000564641 JRKLQ9Y4A0 524 aa3.94□□□□□ -1.78
CHD9-212ENST00000564641 WNK3Q9BYP7 1800 aa3.93□□□□□ -1.78
CHD9-212ENST00000564641 RTL1A6NKG5 1358 aa3.93□□□□□ -1.78
CHD9-212ENST00000564641 KIF24Q5T7B8 1368 aa3.93□□□□□ -1.78
CHD9-212ENST00000564641 USP47Q96K76 1375 aa3.93□□□□□ -1.78
CHD9-212ENST00000564641 FAM237AA0A1B0GTK4 181 aa3.93□□□□□ -1.78
CHD9-212ENST00000564641 C15orf62A8K5M9 175 aa3.93□□□□□ -1.78
CHD9-212ENST00000564641 K7ENM7 598 aa3.93□□□□□ -1.78
CHD9-212ENST00000564641 ARHGEF9O43307 516 aa3.93□□□□□ -1.78
CHD9-212ENST00000564641 SEC31AO94979 1220 aaKnown RBP3.93□□□□□ -1.78
CHD9-212ENST00000564641 LETM1O95202 739 aaPredicted RBP3.93□□□□□ -1.78
CHD9-212ENST00000564641 HNRNPA1P09651 372 aaKnown RBP eCLIP3.93□□□□□ -1.78
CHD9-212ENST00000564641 PLA2G4BP0C869 781 aa3.93□□□□□ -1.78
CHD9-212ENST00000564641 MCCP23508 829 aa3.93□□□□□ -1.78
CHD9-212ENST00000564641 NOVP48745 357 aa3.93□□□□□ -1.78
CHD9-212ENST00000564641 ALG11Q2TAA5 492 aa3.93□□□□□ -1.78
CHD9-212ENST00000564641 FAM53AQ6NSI3 398 aaPredicted RBP3.93□□□□□ -1.78
CHD9-212ENST00000564641 RAD9BQ6WBX8 426 aa3.93□□□□□ -1.78
CHD9-212ENST00000564641 PIWIL4Q7Z3Z4 852 aaKnown RBP3.93□□□□□ -1.78
CHD9-212ENST00000564641 CCDC13Q8IYE1 715 aa3.93□□□□□ -1.78
CHD9-212ENST00000564641 NFKBIDQ8NI38 313 aa3.93□□□□□ -1.78
CHD9-212ENST00000564641 PPP4R1Q8TF05 950 aa3.93□□□□□ -1.78
CHD9-212ENST00000564641 FCAMRQ8WWV6 532 aa3.93□□□□□ -1.78
CHD9-212ENST00000564641 IGSF8Q969P0 613 aa3.93□□□□□ -1.78
CHD9-212ENST00000564641 LINC00479Q96M42 142 aa3.93□□□□□ -1.78
CHD9-212ENST00000564641 ZNF830Q96NB3 372 aaPredicted RBP3.93□□□□□ -1.78
CHD9-212ENST00000564641 TMX4Q9H1E5 349 aaPredicted RBP3.93□□□□□ -1.78
CHD9-212ENST00000564641 MAGIXQ9H6Y5 334 aa3.93□□□□□ -1.78
CHD9-212ENST00000564641 KIF9Q9HAQ2 790 aa3.93□□□□□ -1.78
CHD9-212ENST00000564641 PREBQ9HCU5 417 aa3.93□□□□□ -1.78
CHD9-212ENST00000564641 BLOC1S4Q9NUP1 217 aa3.93□□□□□ -1.78
CHD9-212ENST00000564641 ISY1Q9ULR0 285 aaKnown RBP3.93□□□□□ -1.78
CHD9-212ENST00000564641 NHSQ6T4R5 1651 aa3.93□□□□□ -1.78
CHD9-212ENST00000564641 UTRNP46939 3433 aa3.92□□□□□ -1.78
CHD9-212ENST00000564641 PLEKHG2Q9H7P9 1386 aa3.92□□□□□ -1.78
CHD9-212ENST00000564641 PIK3C2AO00443 1686 aa3.92□□□□□ -1.78
CHD9-212ENST00000564641 A0A0G2JNG1 304 aa3.92□□□□□ -1.78
CHD9-212ENST00000564641 A0A1W2PP11 408 aa3.92□□□□□ -1.78
CHD9-212ENST00000564641 A0A1W2PRG0 241 aa3.92□□□□□ -1.78
CHD9-212ENST00000564641 NDUFAF8A1L188 74 aa3.92□□□□□ -1.78
CHD9-212ENST00000564641 FSD2A1L4K1 749 aa3.92□□□□□ -1.78
CHD9-212ENST00000564641 EIF3CLB5ME19 914 aaKnown RBP3.92□□□□□ -1.78
CHD9-212ENST00000564641 IFNL4K9M1U5 179 aa3.92□□□□□ -1.78
CHD9-212ENST00000564641 SH2B2O14492 632 aaPredicted RBP3.92□□□□□ -1.78
CHD9-212ENST00000564641 TNFSF14O43557 240 aa3.92□□□□□ -1.78
CHD9-212ENST00000564641 JRKO75564 520 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms