RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 SPATA22Q8NHS9 363 aa10.05□□□□□ -0.8
SF3B3-204ENST00000563739 FLVCR1-AS1Q8TAF5 88 aa10.05□□□□□ -0.8
SF3B3-204ENST00000563739 CCHCR1Q8TD31 782 aa10.05□□□□□ -0.8
SF3B3-204ENST00000563739 PPP4R1Q8TF05 950 aa10.05□□□□□ -0.8
SF3B3-204ENST00000563739 MOCOSQ96EN8 888 aa10.05□□□□□ -0.8
SF3B3-204ENST00000563739 MS4A3Q96HJ5 214 aa10.05□□□□□ -0.8
SF3B3-204ENST00000563739 SGSM3Q96HU1 749 aa10.05□□□□□ -0.8
SF3B3-204ENST00000563739 TRAPPC9Q96Q05 1148 aa10.05□□□□□ -0.8
SF3B3-204ENST00000563739 WDR77Q9BQA1 342 aaPredicted RBP10.05□□□□□ -0.8
SF3B3-204ENST00000563739 KLHL25Q9H0H3 589 aa10.05□□□□□ -0.8
SF3B3-204ENST00000563739 UGT1A7Q9HAW7 530 aa10.05□□□□□ -0.8
SF3B3-204ENST00000563739 UGT1A10Q9HAW8 530 aa10.05□□□□□ -0.8
SF3B3-204ENST00000563739 UGT1A8Q9HAW9 530 aa10.05□□□□□ -0.8
SF3B3-204ENST00000563739 CBX8Q9HC52 389 aa10.05□□□□□ -0.8
SF3B3-204ENST00000563739 IMP3Q9NV31 184 aaKnown RBP10.05□□□□□ -0.8
SF3B3-204ENST00000563739 P4HTMQ9NXG6 502 aa10.05□□□□□ -0.8
SF3B3-204ENST00000563739 CDYLQ9Y232 598 aa10.05□□□□□ -0.8
SF3B3-204ENST00000563739 SCINQ9Y6U3 715 aa10.05□□□□□ -0.8
SF3B3-204ENST00000563739 ABCA2Q9BZC7 2435 aa10.05□□□□□ -0.8
SF3B3-204ENST00000563739 OR2AG2A6NM03 316 aa10.04□□□□□ -0.8
SF3B3-204ENST00000563739 C19orf84I3L1E1 186 aa10.04□□□□□ -0.8
SF3B3-204ENST00000563739 BTN3A1O00481 513 aa10.04□□□□□ -0.8
SF3B3-204ENST00000563739 ZNF749O43361 778 aa10.04□□□□□ -0.8
SF3B3-204ENST00000563739 WISP2O76076 250 aa10.04□□□□□ -0.8
SF3B3-204ENST00000563739 MT-CYBP00156 380 aaPredicted RBP10.04□□□□□ -0.8
SF3B3-204ENST00000563739 KLK3P07288 261 aaPredicted RBP10.04□□□□□ -0.8
SF3B3-204ENST00000563739 EDN3P14138 238 aa10.04□□□□□ -0.8
SF3B3-204ENST00000563739 GLRBP48167 497 aa10.04□□□□□ -0.8
SF3B3-204ENST00000563739 TYRO3Q06418 890 aa10.04□□□□□ -0.8
SF3B3-204ENST00000563739 PPIDQ08752 370 aaKnown RBP10.04□□□□□ -0.8
SF3B3-204ENST00000563739 Q0VFX4 171 aa10.04□□□□□ -0.8
SF3B3-204ENST00000563739 PDAP1Q13442 181 aaKnown RBP10.04□□□□□ -0.8
SF3B3-204ENST00000563739 PLCL1Q15111 1095 aa10.04□□□□□ -0.8
SF3B3-204ENST00000563739 CT47A1Q5JQC4 288 aaPredicted RBP10.04□□□□□ -0.8
SF3B3-204ENST00000563739 GPRC6AQ5T6X5 926 aa10.04□□□□□ -0.8
SF3B3-204ENST00000563739 LYPLAL1Q5VWZ2 237 aa10.04□□□□□ -0.8
SF3B3-204ENST00000563739 TIGD7Q6NT04 549 aaPredicted RBP10.04□□□□□ -0.8
SF3B3-204ENST00000563739 DAAM2Q86T65 1068 aa10.04□□□□□ -0.8
SF3B3-204ENST00000563739 AMZ2Q86W34 360 aa10.04□□□□□ -0.8
SF3B3-204ENST00000563739 FAR1Q8WVX9 515 aa10.04□□□□□ -0.8
SF3B3-204ENST00000563739 RELTQ969Z4 430 aa10.04□□□□□ -0.8
SF3B3-204ENST00000563739 RNF25Q96BH1 459 aaPredicted RBP10.04□□□□□ -0.8
SF3B3-204ENST00000563739 CLIP3Q96DZ5 547 aa10.04□□□□□ -0.8
SF3B3-204ENST00000563739 TAAR6Q96RI8 345 aa10.04□□□□□ -0.8
SF3B3-204ENST00000563739 ZNF670Q9BS34 389 aa10.04□□□□□ -0.8
SF3B3-204ENST00000563739 SLC6A20Q9NP91 592 aa10.04□□□□□ -0.8
SF3B3-204ENST00000563739 ANO10Q9NW15 660 aa10.04□□□□□ -0.8
SF3B3-204ENST00000563739 SOHLH2Q9NX45 425 aa10.04□□□□□ -0.8
SF3B3-204ENST00000563739 IL17CQ9P0M4 197 aa10.04□□□□□ -0.8
SF3B3-204ENST00000563739 NENFQ9UMX5 172 aa10.04□□□□□ -0.8
SF3B3-204ENST00000563739 ANKHD1Q8IWZ3 2542 aaKnown RBP10.04□□□□□ -0.8
SF3B3-204ENST00000563739 VPS13CQ709C8 3753 aa10.04□□□□□ -0.8
SF3B3-204ENST00000563739 SOCS6O14544 535 aa10.03□□□□□ -0.8
SF3B3-204ENST00000563739 DESP17661 470 aa10.03□□□□□ -0.8
SF3B3-204ENST00000563739 CA4P22748 312 aa10.03□□□□□ -0.8
SF3B3-204ENST00000563739 PBLDP30039 288 aaPredicted RBP10.03□□□□□ -0.8
SF3B3-204ENST00000563739 CD68P34810 354 aaPredicted RBP10.03□□□□□ -0.8
SF3B3-204ENST00000563739 HALP42357 657 aa10.03□□□□□ -0.8
SF3B3-204ENST00000563739 CHRNA4P43681 627 aa10.03□□□□□ -0.8
SF3B3-204ENST00000563739 KCNK10P57789 538 aa10.03□□□□□ -0.8
SF3B3-204ENST00000563739 OTUD4Q01804 1114 aaKnown RBP10.03□□□□□ -0.8
SF3B3-204ENST00000563739 UBXN1Q04323 297 aa10.03□□□□□ -0.8
SF3B3-204ENST00000563739 ART3Q13508 389 aa10.03□□□□□ -0.8
SF3B3-204ENST00000563739 PTPRCAPQ14761 206 aa10.03□□□□□ -0.8
SF3B3-204ENST00000563739 SLC9A5Q14940 896 aa10.03□□□□□ -0.8
SF3B3-204ENST00000563739 ZXDCQ2QGD7 858 aaPredicted RBP10.03□□□□□ -0.8
SF3B3-204ENST00000563739 DEFB110Q30KQ9 67 aa10.03□□□□□ -0.8
SF3B3-204ENST00000563739 TMEM220Q6QAJ8 160 aa10.03□□□□□ -0.8
SF3B3-204ENST00000563739 KDELC1Q6UW63 502 aa10.03□□□□□ -0.8
SF3B3-204ENST00000563739 B4GALNT4Q76KP1 1039 aa10.03□□□□□ -0.8
SF3B3-204ENST00000563739 COX15Q7KZN9 410 aa10.03□□□□□ -0.8
SF3B3-204ENST00000563739 TRIM73Q86UV7 250 aa10.03□□□□□ -0.8
SF3B3-204ENST00000563739 AMER2Q8N7J2 671 aa10.03□□□□□ -0.8
SF3B3-204ENST00000563739 OR2Y1Q8NGV0 311 aa10.03□□□□□ -0.8
SF3B3-204ENST00000563739 DTX3LQ8TDB6 740 aa10.03□□□□□ -0.8
SF3B3-204ENST00000563739 NANOS1Q8WY41 292 aaKnown RBP10.03□□□□□ -0.8
SF3B3-204ENST00000563739 C12orf66Q96MD2 445 aa10.03□□□□□ -0.8
SF3B3-204ENST00000563739 OLFM3Q96PB7 478 aa10.03□□□□□ -0.8
SF3B3-204ENST00000563739 DHRS4Q9BTZ2 278 aa10.03□□□□□ -0.8
SF3B3-204ENST00000563739 THAP2Q9H0W7 228 aa10.03□□□□□ -0.8
SF3B3-204ENST00000563739 C1GALT1Q9NS00 363 aa10.03□□□□□ -0.8
SF3B3-204ENST00000563739 SMOXQ9NWM0 555 aa10.03□□□□□ -0.8
SF3B3-204ENST00000563739 AIPL1Q9NZN9 384 aa10.03□□□□□ -0.8
SF3B3-204ENST00000563739 MYO6Q9UM54 1294 aa10.03□□□□□ -0.8
SF3B3-204ENST00000563739 PTRH2Q9Y3E5 179 aaKnown RBP10.03□□□□□ -0.8
SF3B3-204ENST00000563739 A0A1W2PQJ5 194 aa10.02□□□□□ -0.81
SF3B3-204ENST00000563739 SYCE3A1L190 88 aa10.02□□□□□ -0.81
SF3B3-204ENST00000563739 C3orf70A6NLC5 250 aaPredicted RBP10.02□□□□□ -0.81
SF3B3-204ENST00000563739 LDB2O43679 373 aa10.02□□□□□ -0.81
SF3B3-204ENST00000563739 BUD23O43709 281 aaKnown RBP10.02□□□□□ -0.81
SF3B3-204ENST00000563739 KCNJ13O60928 360 aa10.02□□□□□ -0.81
SF3B3-204ENST00000563739 TPBGLP0DKB5 382 aa10.02□□□□□ -0.81
SF3B3-204ENST00000563739 SKILP12757 684 aa10.02□□□□□ -0.81
SF3B3-204ENST00000563739 HLA-DPA1P20036 260 aa10.02□□□□□ -0.81
SF3B3-204ENST00000563739 CYP2A7P20853 494 aa10.02□□□□□ -0.81
SF3B3-204ENST00000563739 CDH3P22223 829 aa10.02□□□□□ -0.81
SF3B3-204ENST00000563739 PRDX3P30048 256 aaKnown RBP10.02□□□□□ -0.81
SF3B3-204ENST00000563739 HMGCLP35914 325 aa10.02□□□□□ -0.81
SF3B3-204ENST00000563739 HADHAP40939 763 aa10.02□□□□□ -0.81
SF3B3-204ENST00000563739 PREPP48147 710 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms