RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 GLP2RO95838 553 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 SMAD1Q15797 465 aaKnown RBP6.18□□□□□ -1.42
CLK3-212ENST00000563418 ATP13A4Q4VNC1 1196 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 SLC27A3Q5K4L6 730 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 BTBD8Q5XKL5 378 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 SLC26A9Q7LBE3 791 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 ATCAYQ86WG3 371 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 CLRN3Q8NCR9 226 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 BCL7CQ8WUZ0 217 aaPredicted RBP6.18□□□□□ -1.42
CLK3-212ENST00000563418 SLC38A7Q9NVC3 462 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 TAS2R13Q9NYV9 303 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 GGA3Q9NZ52 723 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 COG5Q9UP83 839 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 ZNF804BA4D1E1 1349 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 ZBTB24O43167 697 aaPredicted RBP6.18□□□□□ -1.42
CLK3-212ENST00000563418 BUD23O43709 281 aaKnown RBP6.18□□□□□ -1.42
CLK3-212ENST00000563418 SLC37A4O43826 429 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 SNNO75324 88 aaPredicted RBP6.18□□□□□ -1.42
CLK3-212ENST00000563418 FNTBP49356 437 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 CXCR4P61073 352 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 FMO1Q01740 532 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 SLC36A3Q495N2 470 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 NR4A3Q92570 626 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 ZFP42Q96MM3 310 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 KLHL5Q96PQ7 755 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 KLHL28Q9NXS3 571 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 CRYL1Q9Y2S2 319 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 CHURC1-FNTBB4DL54 471 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 ANKRD63C9JTQ0 380 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 FMO4P31512 558 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 RPS8P62241 208 aaKnown RBP6.18□□□□□ -1.42
CLK3-212ENST00000563418 VEPH1Q14D04 833 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 OR14K1Q8NGZ2 314 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 MUS81Q96NY9 551 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 TMEM209Q96SK2 561 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 SPATA5L1Q9BVQ7 753 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 C14orf119Q9NWQ9 140 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 NUDT19A8MXV4 375 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 E9PI62 339 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 ZNF780AO75290 641 aaPredicted RBP6.17□□□□□ -1.42
CLK3-212ENST00000563418 DNTTP04053 509 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 USP17L8P0C7I0 530 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 ZSCAN5DPP0CG00 497 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 ODC1P11926 461 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 YWHAZP63104 245 aaKnown RBP6.17□□□□□ -1.42
CLK3-212ENST00000563418 LGI2Q8N0V4 545 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 ACBD4Q8NC06 268 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 PSD4Q8NDX1 1056 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 CPB2Q96IY4 423 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 C7orf50Q9BRJ6 194 aaKnown RBP6.17□□□□□ -1.42
CLK3-212ENST00000563418 REEP4Q9H6H4 257 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 NAALAD2Q9Y3Q0 740 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 hCG_1807616A0A1W2PRN6 198 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 F8W036 122 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 PITPNM1O00562 1244 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 DDCP20711 480 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 SLC16A1P53985 500 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 SPIBQ01892 262 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 PTPRNQ16849 979 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 LHFPL5Q8TAF8 219 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 GPR63Q9BZJ6 419 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 FAM217BQ9NTX9 383 aaPredicted RBP6.17□□□□□ -1.42
CLK3-212ENST00000563418 SRRDQ9UH36 339 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 USP31Q70CQ4 1352 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 SLC1A7O00341 560 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 ZP3P21754 424 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 FMO3P31513 532 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 HTRA4P83105 476 aaPredicted RBP6.17□□□□□ -1.42
CLK3-212ENST00000563418 RPL13AP3Q6NVV1 102 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 IL27RAQ6UWB1 636 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 SLC30A8Q8IWU4 369 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 CLP1Q92989 425 aaKnown RBP6.17□□□□□ -1.42
CLK3-212ENST00000563418 TMIGD2Q96BF3 282 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 CGRRF1Q99675 332 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 SCP2D1Q9UJQ7 156 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 FXYD6-FXYD2A0A087WZ82 144 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 FAM234BA2RU67 622 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 EFCAB7A8K855 629 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 SEC14L2O76054 403 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 SMIM6P0DI80 62 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 PRKCAP17252 672 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 MAGEA3P43357 314 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 UBXN11Q5T124 520 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 HID1Q8IV36 788 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 NKAPQ8N5F7 415 aaKnown RBP6.17□□□□□ -1.42
CLK3-212ENST00000563418 ZNF283Q8N7M2 679 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 ST8SIA4Q92187 359 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 SEMA4DQ92854 862 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 MAP6Q96JE9 813 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 FXYD6Q9H0Q3 95 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 PCDHAC1Q9H158 963 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 EMC7Q9NPA0 242 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 KIF25Q9UIL4 384 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 ERVW-1Q9UQF0 538 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 FARSAQ9Y285 508 aaKnown RBP6.17□□□□□ -1.42
CLK3-212ENST00000563418 PCDHGB5Q9Y5G0 923 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 NUBP2Q9Y5Y2 271 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 CHD4Q14839 1912 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 MGAT4DA6NG13 374 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 SLC28A1O00337 649 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms